RNA–Protein interactions for RNA: ENST00000412847.5

PTPRN-203, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-203ENST00000412847 H7C1H1 209 aa8.06□□□□□ -1.12
PTPRN-203ENST00000412847 MGPP08493 103 aa8.06□□□□□ -1.12
PTPRN-203ENST00000412847 SULT1A2P50226 295 aa8.06□□□□□ -1.12
PTPRN-203ENST00000412847 HIGD2BQ4VC39 106 aa8.06□□□□□ -1.12
PTPRN-203ENST00000412847 CST9LP1Q5W188 147 aa8.06□□□□□ -1.12
PTPRN-203ENST00000412847 MAP1LC3BQ9GZQ8 125 aa8.06□□□□□ -1.12
PTPRN-203ENST00000412847 GAGE12HA6NDE8 117 aa8.05□□□□□ -1.12
PTPRN-203ENST00000412847 UBE2L6O14933 153 aa8.05□□□□□ -1.12
PTPRN-203ENST00000412847 FHITP49789 147 aa8.05□□□□□ -1.12
PTPRN-203ENST00000412847 A0A096LNI7 61 aa8.04□□□□□ -1.12
PTPRN-203ENST00000412847 TEX46H3BTG2 121 aa8.04□□□□□ -1.12
PTPRN-203ENST00000412847 M0QY20 66 aa8.04□□□□□ -1.12
PTPRN-203ENST00000412847 SUMO4Q6EEV6 95 aa8.04□□□□□ -1.12
PTPRN-203ENST00000412847 S100A9P06702 114 aaKnown RBP8.03□□□□□ -1.12
PTPRN-203ENST00000412847 PGLYRP4Q96LB8 373 aa8.03□□□□□ -1.12
PTPRN-203ENST00000412847 GVQW2A0A096LPI5 108 aaPredicted RBP8.02□□□□□ -1.13
PTPRN-203ENST00000412847 IGKV3OR2-268A0A0C4DH90 116 aa8.02□□□□□ -1.13
PTPRN-203ENST00000412847 AMTP48728 403 aa8.02□□□□□ -1.13
PTPRN-203ENST00000412847 SRSF9Q13242 221 aaKnown RBP eCLIP8.02□□□□□ -1.13
PTPRN-203ENST00000412847 TEX261Q6UWH6 196 aa8.02□□□□□ -1.13
PTPRN-203ENST00000412847 FAM213BQ8TBF2 198 aa8.02□□□□□ -1.13
PTPRN-203ENST00000412847 MLST8Q9BVC4 326 aa8.02□□□□□ -1.13
PTPRN-203ENST00000412847 SCO2A0A1W2PP80 73 aa8.01□□□□□ -1.13
PTPRN-203ENST00000412847 PAGE4O60829 102 aa8.01□□□□□ -1.13
PTPRN-203ENST00000412847 RASL11AQ6T310 242 aa8.01□□□□□ -1.13
PTPRN-203ENST00000412847 ALKAL2Q6UX46 152 aa8.01□□□□□ -1.13
PTPRN-203ENST00000412847 Q6ZRP5 223 aa8.01□□□□□ -1.13
PTPRN-203ENST00000412847 BAGE2Q86Y30 109 aa8.01□□□□□ -1.13
PTPRN-203ENST00000412847 LINC00474Q9P2X8 69 aa8.01□□□□□ -1.13
PTPRN-203ENST00000412847 PKIGQ9Y2B9 76 aa8.01□□□□□ -1.13
PTPRN-203ENST00000412847 H2AFB1P0C5Y9 115 aa8□□□□□ -1.13
PTPRN-203ENST00000412847 BLOC1S1P78537 153 aa8□□□□□ -1.13
PTPRN-203ENST00000412847 COTL1Q14019 142 aa8□□□□□ -1.13
PTPRN-203ENST00000412847 MBD3L1Q8WWY6 194 aa8□□□□□ -1.13
PTPRN-203ENST00000412847 TPPP3Q9BW30 176 aa8□□□□□ -1.13
PTPRN-203ENST00000412847 SFT2D1Q8WV19 159 aa7.99□□□□□ -1.13
PTPRN-203ENST00000412847 CHCHD10Q8WYQ3 142 aaPredicted RBP7.99□□□□□ -1.13
PTPRN-203ENST00000412847 NIT2Q9NQR4 276 aa7.99□□□□□ -1.13
PTPRN-203ENST00000412847 LPAP08519 4548 aa7.98□□□□□ -1.13
PTPRN-203ENST00000412847 TRAV1-1A0A0B4J248 108 aa7.98□□□□□ -1.13
PTPRN-203ENST00000412847 IGLC6P0CF74 106 aa7.98□□□□□ -1.13
PTPRN-203ENST00000412847 RAB14P61106 215 aa7.98□□□□□ -1.13
PTPRN-203ENST00000412847 CACNG7P62955 275 aa7.98□□□□□ -1.13
PTPRN-203ENST00000412847 FER1L6-AS1Q8NA97 138 aa7.98□□□□□ -1.13
PTPRN-203ENST00000412847 FAM231BA6NCW3 169 aa7.97□□□□□ -1.13
PTPRN-203ENST00000412847 AMMECR1LQ6DCA0 310 aa7.97□□□□□ -1.13
PTPRN-203ENST00000412847 CARD19Q96LW7 228 aa7.97□□□□□ -1.13
PTPRN-203ENST00000412847 IFNA1P01562 189 aa7.96□□□□□ -1.14
PTPRN-203ENST00000412847 TRGC1P0CF51 173 aa7.96□□□□□ -1.14
PTPRN-203ENST00000412847 TAGLN2P37802 199 aaKnown RBP7.96□□□□□ -1.14
PTPRN-203ENST00000412847 FOXI1Q12951 378 aa7.96□□□□□ -1.14
PTPRN-203ENST00000412847 A0A1B0GV50 99 aa7.95□□□□□ -1.14
PTPRN-203ENST00000412847 RPS20P60866 119 aaKnown RBP7.95□□□□□ -1.14
PTPRN-203ENST00000412847 RNASEKQ6P5S7 137 aaKnown RBP7.95□□□□□ -1.14
PTPRN-203ENST00000412847 OR2D3Q8NGH3 330 aa7.95□□□□□ -1.14
PTPRN-203ENST00000412847 MANBALQ9NQG1 85 aa7.95□□□□□ -1.14
PTPRN-203ENST00000412847 IGHV1-58A0A0C4DH39 117 aa7.94□□□□□ -1.14
PTPRN-203ENST00000412847 RPL35P42766 123 aaKnown RBP7.94□□□□□ -1.14
PTPRN-203ENST00000412847 LINC00526Q96FQ7 95 aa7.94□□□□□ -1.14
PTPRN-203ENST00000412847 NTF3P20783 257 aa7.93□□□□□ -1.14
PTPRN-203ENST00000412847 ZNF664Q8N3J9 261 aa7.93□□□□□ -1.14
PTPRN-203ENST00000412847 KRTAP9-2Q9BYQ4 174 aa7.93□□□□□ -1.14
PTPRN-203ENST00000412847 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.92□□□□□ -1.14
PTPRN-203ENST00000412847 IGKV2-29A2NJV5 120 aaPredicted RBP7.92□□□□□ -1.14
PTPRN-203ENST00000412847 F2Z2F3 143 aa7.92□□□□□ -1.14
PTPRN-203ENST00000412847 H7C423 109 aa7.92□□□□□ -1.14
PTPRN-203ENST00000412847 NCR2O95944 276 aa7.92□□□□□ -1.14
PTPRN-203ENST00000412847 APCSP02743 223 aa7.92□□□□□ -1.14
PTPRN-203ENST00000412847 FGF6P10767 208 aa7.92□□□□□ -1.14
PTPRN-203ENST00000412847 XCL1P47992 114 aa7.92□□□□□ -1.14
PTPRN-203ENST00000412847 PTTG1IPP53801 180 aa7.92□□□□□ -1.14
PTPRN-203ENST00000412847 SYCNQ0VAF6 134 aa7.92□□□□□ -1.14
PTPRN-203ENST00000412847 CENPWQ5EE01 88 aa7.92□□□□□ -1.14
PTPRN-203ENST00000412847 CLLU1Q5K131 121 aa7.92□□□□□ -1.14
PTPRN-203ENST00000412847 OR5A1Q8NGJ0 315 aa7.92□□□□□ -1.14
PTPRN-203ENST00000412847 GNG13Q9P2W3 67 aa7.92□□□□□ -1.14
PTPRN-203ENST00000412847 TRAV26-2A0A0B4J265 109 aa7.91□□□□□ -1.14
PTPRN-203ENST00000412847 XKRY2A2RUG3 117 aa7.91□□□□□ -1.14
PTPRN-203ENST00000412847 C19orf71A6NCJ1 209 aa7.91□□□□□ -1.14
PTPRN-203ENST00000412847 CCL25O15444 150 aa7.91□□□□□ -1.14
PTPRN-203ENST00000412847 IFITM2Q01629 132 aa7.91□□□□□ -1.14
PTPRN-203ENST00000412847 LYZL1Q6UWQ5 148 aa7.91□□□□□ -1.14
PTPRN-203ENST00000412847 PSORS1C2Q9UIG4 136 aa7.91□□□□□ -1.14
PTPRN-203ENST00000412847 LOC107984640A0A0U1RRK4 108 aa7.9□□□□□ -1.14
PTPRN-203ENST00000412847 ZNF561-AS1K7EIQ3 104 aa7.9□□□□□ -1.14
PTPRN-203ENST00000412847 MT-ND6P03923 174 aa7.9□□□□□ -1.14
PTPRN-203ENST00000412847 BCL2P10415 239 aa7.9□□□□□ -1.14
PTPRN-203ENST00000412847 ZNF25P17030 456 aaPredicted RBP7.9□□□□□ -1.14
PTPRN-203ENST00000412847 GAGE2BQ13066 116 aa7.9□□□□□ -1.14
PTPRN-203ENST00000412847 GATD1Q8NB37 220 aa7.9□□□□□ -1.14
PTPRN-203ENST00000412847 C11orf52Q96A22 123 aa7.9□□□□□ -1.14
PTPRN-203ENST00000412847 LINC00959A0A1B0GUT2 108 aa7.89□□□□□ -1.15
PTPRN-203ENST00000412847 PDE6DO43924 150 aa7.89□□□□□ -1.15
PTPRN-203ENST00000412847 CTRLP40313 264 aa7.89□□□□□ -1.15
PTPRN-203ENST00000412847 CAMPP49913 170 aa7.89□□□□□ -1.15
PTPRN-203ENST00000412847 CCL20P78556 96 aa7.89□□□□□ -1.15
PTPRN-203ENST00000412847 MEF2BQ02080 365 aaPredicted RBP7.89□□□□□ -1.15
PTPRN-203ENST00000412847 BTF3L4Q96K17 158 aa7.89□□□□□ -1.15
PTPRN-203ENST00000412847 A0A0U1RQV1 116 aa7.88□□□□□ -1.15
PTPRN-203ENST00000412847 A0A1W2PNN7 141 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms