RNA–Protein interactions for RNA: ENST00000412845.1

NEFHP1-201, Transcript of neurofilament heavy pseudogene 1, humanhuman

BASIC

Gene NEFHP1, Length 2,629 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFHP1-201ENST00000412845 IGHV1-58A0A0C4DH39 117 aa13.74□□□□□ -0.21
NEFHP1-201ENST00000412845 SNCGO76070 127 aa13.74□□□□□ -0.21
NEFHP1-201ENST00000412845 RPL13AP40429 203 aaKnown RBP13.73□□□□□ -0.21
NEFHP1-201ENST00000412845 GAGE2BQ13066 116 aa13.73□□□□□ -0.21
NEFHP1-201ENST00000412845 GAGE2EQ4V326 116 aa13.73□□□□□ -0.21
NEFHP1-201ENST00000412845 GAGE2DQ9UEU5 116 aa13.73□□□□□ -0.21
NEFHP1-201ENST00000412845 TRGV11A0A075B6L2 103 aa13.73□□□□□ -0.21
NEFHP1-201ENST00000412845 H7C423 109 aa13.73□□□□□ -0.21
NEFHP1-201ENST00000412845 Q6ZSN1 163 aa13.73□□□□□ -0.21
NEFHP1-201ENST00000412845 CLEC2BQ92478 149 aa13.73□□□□□ -0.21
NEFHP1-201ENST00000412845 IGHV4-59P01825 116 aa13.72□□□□□ -0.21
NEFHP1-201ENST00000412845 MSMBP08118 114 aa13.72□□□□□ -0.21
NEFHP1-201ENST00000412845 LINC01600Q96MT4 127 aa13.72□□□□□ -0.21
NEFHP1-201ENST00000412845 SS18L2Q9UHA2 77 aa13.72□□□□□ -0.21
NEFHP1-201ENST00000412845 TRAV8-4A0A0B4J246 113 aa13.72□□□□□ -0.21
NEFHP1-201ENST00000412845 H3BMM0 161 aa13.72□□□□□ -0.21
NEFHP1-201ENST00000412845 C2orf82Q6UX34 121 aa13.72□□□□□ -0.21
NEFHP1-201ENST00000412845 UBE2WQ96B02 151 aa13.72□□□□□ -0.21
NEFHP1-201ENST00000412845 VSIG2Q96IQ7 327 aa13.72□□□□□ -0.21
NEFHP1-201ENST00000412845 SPANXDQ9BXN6 97 aa13.72□□□□□ -0.21
NEFHP1-201ENST00000412845 SPANXCQ9NY87 97 aa13.72□□□□□ -0.21
NEFHP1-201ENST00000412845 MIAQ16674 131 aa13.71□□□□□ -0.22
NEFHP1-201ENST00000412845 TNFRSF18Q9Y5U5 241 aa13.71□□□□□ -0.22
NEFHP1-201ENST00000412845 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.7□□□□□ -0.22
NEFHP1-201ENST00000412845 IGKV2-29A2NJV5 120 aaPredicted RBP13.7□□□□□ -0.22
NEFHP1-201ENST00000412845 NDUFV3P56181 108 aaKnown RBP13.7□□□□□ -0.22
NEFHP1-201ENST00000412845 DAND5Q8N907 189 aa13.7□□□□□ -0.22
NEFHP1-201ENST00000412845 CCL19Q99731 98 aa13.7□□□□□ -0.22
NEFHP1-201ENST00000412845 CHCHD7Q9BUK0 85 aa13.7□□□□□ -0.22
NEFHP1-201ENST00000412845 B5MCH6 92 aa13.69□□□□□ -0.22
NEFHP1-201ENST00000412845 GNLYP22749 145 aa13.69□□□□□ -0.22
NEFHP1-201ENST00000412845 GAGE5Q13069 117 aa13.69□□□□□ -0.22
NEFHP1-201ENST00000412845 GAGE6Q13070 117 aa13.69□□□□□ -0.22
NEFHP1-201ENST00000412845 C15orf53Q8NAA6 179 aa13.69□□□□□ -0.22
NEFHP1-201ENST00000412845 UBE2D4Q9Y2X8 147 aa13.69□□□□□ -0.22
NEFHP1-201ENST00000412845 ATP5J2P56134 94 aa13.68□□□□□ -0.22
NEFHP1-201ENST00000412845 TINCRA0A1B0GVN0 87 aa13.68□□□□□ -0.22
NEFHP1-201ENST00000412845 EDA2RQ9HAV5 297 aa13.68□□□□□ -0.22
NEFHP1-201ENST00000412845 IGHV3-38A0A0C4DH36 116 aa13.67□□□□□ -0.22
NEFHP1-201ENST00000412845 DEFB112Q30KQ8 113 aa13.67□□□□□ -0.22
NEFHP1-201ENST00000412845 CSMD2Q7Z408 3487 aa13.67□□□□□ -0.22
NEFHP1-201ENST00000412845 TMEM61Q8N0U2 210 aa13.67□□□□□ -0.22
NEFHP1-201ENST00000412845 LINC00467Q9BRT7 94 aa13.67□□□□□ -0.22
NEFHP1-201ENST00000412845 ITPR1Q14643 2758 aa13.66□□□□□ -0.22
NEFHP1-201ENST00000412845 RNF152Q8N8N0 203 aa13.66□□□□□ -0.22
NEFHP1-201ENST00000412845 SVIPQ8NHG7 77 aa13.66□□□□□ -0.22
NEFHP1-201ENST00000412845 HOXD3P31249 432 aaPredicted RBP13.65□□□□□ -0.22
NEFHP1-201ENST00000412845 RBMY1BA6NDE4 496 aaKnown RBP13.65□□□□□ -0.22
NEFHP1-201ENST00000412845 RBMY1EA6NEQ0 496 aaKnown RBP13.65□□□□□ -0.22
NEFHP1-201ENST00000412845 RBMY1DP0C7P1 496 aaKnown RBP13.65□□□□□ -0.22
NEFHP1-201ENST00000412845 TTC32Q5I0X7 151 aa13.65□□□□□ -0.22
NEFHP1-201ENST00000412845 ZANQ9Y493 2812 aa13.64□□□□□ -0.23
NEFHP1-201ENST00000412845 CCDC179H3BU77 68 aa13.64□□□□□ -0.23
NEFHP1-201ENST00000412845 COX6CP09669 75 aa13.64□□□□□ -0.23
NEFHP1-201ENST00000412845 DEFB131AP59861 70 aa13.64□□□□□ -0.23
NEFHP1-201ENST00000412845 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.64□□□□□ -0.23
NEFHP1-201ENST00000412845 DUX3Q96PT4 197 aa13.64□□□□□ -0.23
NEFHP1-201ENST00000412845 CDKN2A-AS1Q9UH64 79 aa13.64□□□□□ -0.23
NEFHP1-201ENST00000412845 LST1O00453 97 aa13.64□□□□□ -0.23
NEFHP1-201ENST00000412845 IFITM1P13164 125 aa13.64□□□□□ -0.23
NEFHP1-201ENST00000412845 SPANXA1Q9NS26 97 aa13.64□□□□□ -0.23
NEFHP1-201ENST00000412845 H3BT86 120 aa13.63□□□□□ -0.23
NEFHP1-201ENST00000412845 Q6Q795 121 aa13.62□□□□□ -0.23
NEFHP1-201ENST00000412845 USP9YO00507 2555 aaPredicted RBP13.62□□□□□ -0.23
NEFHP1-201ENST00000412845 CITED2Q99967 270 aaPredicted RBP13.61□□□□□ -0.23
NEFHP1-201ENST00000412845 COX6A2Q02221 97 aa13.6□□□□□ -0.23
NEFHP1-201ENST00000412845 TMEM101Q96IK0 257 aa13.6□□□□□ -0.23
NEFHP1-201ENST00000412845 B4DSR2 109 aa13.6□□□□□ -0.23
NEFHP1-201ENST00000412845 DEFB136Q30KP8 78 aa13.6□□□□□ -0.23
NEFHP1-201ENST00000412845 C18orf65Q6ZTR6 163 aa13.6□□□□□ -0.23
NEFHP1-201ENST00000412845 YAE1D1Q9NRH1 226 aa13.6□□□□□ -0.23
NEFHP1-201ENST00000412845 A0A0U1RRA0 63 aa13.59□□□□□ -0.23
NEFHP1-201ENST00000412845 SLURP1P55000 103 aa13.59□□□□□ -0.23
NEFHP1-201ENST00000412845 ZNF625Q96I27 306 aaPredicted RBP13.59□□□□□ -0.23
NEFHP1-201ENST00000412845 GAGE12JA6NER3 117 aa13.59□□□□□ -0.23
NEFHP1-201ENST00000412845 GAGE7O76087 117 aa13.59□□□□□ -0.23
NEFHP1-201ENST00000412845 GAGE12FP0CL80 117 aa13.59□□□□□ -0.23
NEFHP1-201ENST00000412845 GAGE12GP0CL81 117 aa13.59□□□□□ -0.23
NEFHP1-201ENST00000412845 GAGE12IP0CL82 117 aa13.59□□□□□ -0.23
NEFHP1-201ENST00000412845 GAGE4Q13068 117 aa13.59□□□□□ -0.23
NEFHP1-201ENST00000412845 TMEM89A2RUT3 159 aa13.58□□□□□ -0.24
NEFHP1-201ENST00000412845 TIMM17BO60830 172 aa13.58□□□□□ -0.24
NEFHP1-201ENST00000412845 NRGNQ92686 78 aa13.58□□□□□ -0.24
NEFHP1-201ENST00000412845 NDUFA1O15239 70 aa13.57□□□□□ -0.24
NEFHP1-201ENST00000412845 ZNF415Q09FC8 603 aa13.57□□□□□ -0.24
NEFHP1-201ENST00000412845 DEFB121Q5J5C9 76 aa13.56□□□□□ -0.24
NEFHP1-201ENST00000412845 C11orf72Q8NBR9 251 aa13.56□□□□□ -0.24
NEFHP1-201ENST00000412845 MXRA5Q9NR99 2828 aa13.56□□□□□ -0.24
NEFHP1-201ENST00000412845 IGHV3OR16-12A0A075B7B8 117 aa13.56□□□□□ -0.24
NEFHP1-201ENST00000412845 IGHV3-53P01767 116 aa13.56□□□□□ -0.24
NEFHP1-201ENST00000412845 Q9H8V8 135 aa13.56□□□□□ -0.24
NEFHP1-201ENST00000412845 UTP20O75691 2785 aaKnown RBP13.55□□□□□ -0.24
NEFHP1-201ENST00000412845 IGLV5-45A0A087WSX0 123 aa13.55□□□□□ -0.24
NEFHP1-201ENST00000412845 A8MTW9 85 aa13.55□□□□□ -0.24
NEFHP1-201ENST00000412845 LINC00308Q8TCZ7 52 aa13.55□□□□□ -0.24
NEFHP1-201ENST00000412845 CUBNO60494 3623 aa13.55□□□□□ -0.24
NEFHP1-201ENST00000412845 NDUFA7O95182 113 aa13.55□□□□□ -0.24
NEFHP1-201ENST00000412845 MAPK1IP1LQ8NDC0 245 aa13.55□□□□□ -0.24
NEFHP1-201ENST00000412845 FLNCQ14315 2725 aa13.54□□□□□ -0.24
NEFHP1-201ENST00000412845 TIRAPP58753 221 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms