RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 ZNF138P52744 262 aa3.87□□□□□ -1.79
LINC00342-201ENST00000412393 SIGLEC15Q6ZMC9 328 aa3.87□□□□□ -1.79
LINC00342-201ENST00000412393 PRELID3AQ96N28 172 aa3.87□□□□□ -1.79
LINC00342-201ENST00000412393 SHANK2-AS3Q9BTD1 123 aa3.87□□□□□ -1.79
LINC00342-201ENST00000412393 TPPP3Q9BW30 176 aa3.87□□□□□ -1.79
LINC00342-201ENST00000412393 SPANXDQ9BXN6 97 aa3.87□□□□□ -1.79
LINC00342-201ENST00000412393 HIGD1AQ9Y241 93 aa3.87□□□□□ -1.79
LINC00342-201ENST00000412393 STARD9Q9P2P6 4700 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 TRBV25-1A0A075B6N4 114 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 IGHV4-4A0A075B6R2 117 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 IGHV3OR16-13A0A075B7E8 117 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 IGHV3-49A0A0A0MS15 119 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 IGHV3-74A0A0B4J1X5 117 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 TRAV12-1A0A0B4J245 112 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 IGHV7-4-1A0A0J9YVY3 117 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 LCE6AA0A183 80 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 LINC01549A6NIU2 74 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 APOC4P55056 127 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 GNG5P63218 68 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 RRN3P1Q2M238 152 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 C12orf74Q32Q52 190 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 ODF3L2Q3SX64 289 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 MRPL51Q4U2R6 128 aaKnown RBP3.86□□□□□ -1.79
LINC00342-201ENST00000412393 LYRM7Q5U5X0 104 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 AMN1Q8IY45 258 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 ZC2HC1AQ96GY0 325 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 OVOL2Q9BRP0 275 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 RHPN1-AS1Q9BWJ2 59 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 TMEM126AQ9H061 195 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 MRPL36Q9P0J6 103 aaKnown RBP3.86□□□□□ -1.79
LINC00342-201ENST00000412393 SS18L2Q9UHA2 77 aa3.86□□□□□ -1.79
LINC00342-201ENST00000412393 TENM2Q9NT68 2774 aa3.85□□□□□ -1.79
LINC00342-201ENST00000412393 IGKV3-7A0A075B6H7 116 aa3.85□□□□□ -1.79
LINC00342-201ENST00000412393 IGLV2-18A0A075B6J9 118 aa3.85□□□□□ -1.79
LINC00342-201ENST00000412393 TRBV7-3A0A075B6L6 115 aa3.85□□□□□ -1.79
LINC00342-201ENST00000412393 TMEM262E9PQX1 116 aa3.85□□□□□ -1.79
LINC00342-201ENST00000412393 H3BRN7 92 aa3.85□□□□□ -1.79
LINC00342-201ENST00000412393 DPM2O94777 84 aa3.85□□□□□ -1.79
LINC00342-201ENST00000412393 IGKCP01834 107 aa3.85□□□□□ -1.79
LINC00342-201ENST00000412393 RPL35AP18077 110 aaKnown RBP3.85□□□□□ -1.79
LINC00342-201ENST00000412393 FXYD2P54710 66 aa3.85□□□□□ -1.79
LINC00342-201ENST00000412393 CMC4P56277 68 aaPredicted RBP3.85□□□□□ -1.79
LINC00342-201ENST00000412393 CACNG7P62955 275 aa3.85□□□□□ -1.79
LINC00342-201ENST00000412393 WFDC2Q14508 124 aa3.85□□□□□ -1.79
LINC00342-201ENST00000412393 Q6Q795 121 aa3.85□□□□□ -1.79
LINC00342-201ENST00000412393 PCP2Q8IVA1 136 aa3.85□□□□□ -1.79
LINC00342-201ENST00000412393 Q8N8P6 123 aa3.85□□□□□ -1.79
LINC00342-201ENST00000412393 MPLKIPQ8TAP9 179 aa3.85□□□□□ -1.79
LINC00342-201ENST00000412393 PTH2Q96A98 100 aa3.85□□□□□ -1.79
LINC00342-201ENST00000412393 CHAC1Q9BUX1 264 aa3.85□□□□□ -1.79
LINC00342-201ENST00000412393 TP73-AS1Q9UF72 201 aa3.85□□□□□ -1.79
LINC00342-201ENST00000412393 PLECQ15149 4684 aaKnown RBP3.85□□□□□ -1.79
LINC00342-201ENST00000412393 TRBV20-1A0A075B6N2 111 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 A0A087WX48 190 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 IGHV3-66A0A0C4DH42 116 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 RBAKDNA6NC62 111 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 D6R8Y8 96 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 SPRY2O43597 315 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 SCGB2A1O75556 95 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 TNFRSF6BO95407 300 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 IGKV1-17P01599 117 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 SPINK8P0C7L1 97 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 ORM2P19652 201 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 PLNP26678 52 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 CKS2P33552 79 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 DEFB135Q30KP9 77 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 CFAP126Q5VTH2 177 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 LYZL1Q6UWQ5 148 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 GOLT1AQ6ZVE7 132 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 APRG1Q8IVJ8 170 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 SMIM20Q8N5G0 67 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 KIR2DL5BQ8NHK3 375 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 GLMPQ8WWB7 406 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 RNF185Q96GF1 192 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 MAP1LC3AQ9H492 121 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 MAP6D1Q9H9H5 199 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 TP53TG1Q9Y2A0 90 aa3.84□□□□□ -1.79
LINC00342-201ENST00000412393 RYR2Q92736 4967 aa3.83□□□□□ -1.8
LINC00342-201ENST00000412393 CSMD3Q7Z407 3707 aa3.83□□□□□ -1.8
LINC00342-201ENST00000412393 IGKV2D-26A0A0A0MRZ7 120 aa3.83□□□□□ -1.8
LINC00342-201ENST00000412393 GAGE12JA6NER3 117 aa3.83□□□□□ -1.8
LINC00342-201ENST00000412393 GAGE7O76087 117 aa3.83□□□□□ -1.8
LINC00342-201ENST00000412393 GAGE12FP0CL80 117 aa3.83□□□□□ -1.8
LINC00342-201ENST00000412393 GAGE12GP0CL81 117 aa3.83□□□□□ -1.8
LINC00342-201ENST00000412393 GAGE12IP0CL82 117 aa3.83□□□□□ -1.8
LINC00342-201ENST00000412393 ASIPP42127 132 aa3.83□□□□□ -1.8
LINC00342-201ENST00000412393 UBE2D1P51668 147 aa3.83□□□□□ -1.8
LINC00342-201ENST00000412393 UBE2D3P61077 147 aa3.83□□□□□ -1.8
LINC00342-201ENST00000412393 UBE2D2P62837 147 aa3.83□□□□□ -1.8
LINC00342-201ENST00000412393 GAGE4Q13068 117 aa3.83□□□□□ -1.8
LINC00342-201ENST00000412393 Q6ZUT4 128 aa3.83□□□□□ -1.8
LINC00342-201ENST00000412393 PRNTQ86SH4 94 aa3.83□□□□□ -1.8
LINC00342-201ENST00000412393 OR8A1Q8NGG7 326 aa3.83□□□□□ -1.8
LINC00342-201ENST00000412393 RNF183Q96D59 192 aa3.83□□□□□ -1.8
LINC00342-201ENST00000412393 C18orf15Q96N68 181 aa3.83□□□□□ -1.8
LINC00342-201ENST00000412393 METTL26Q96S19 204 aa3.83□□□□□ -1.8
LINC00342-201ENST00000412393 DNAH1Q9P2D7 4330 aa3.82□□□□□ -1.8
LINC00342-201ENST00000412393 TRAV8-1A0A0A6YYK1 113 aa3.82□□□□□ -1.8
LINC00342-201ENST00000412393 TRAV2A0A0B4J234 112 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms