RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 TMEM241Q24JQ0 296 aa11.4□□□□□ -0.58
HSPG2-204ENST00000412328 KCNIP4Q6PIL6 250 aa11.4□□□□□ -0.58
HSPG2-204ENST00000412328 Q6ZSA8 131 aa11.4□□□□□ -0.58
HSPG2-204ENST00000412328 NAT8Q9UHE5 227 aa11.4□□□□□ -0.58
HSPG2-204ENST00000412328 IGLV4-60A0A075B6I1 120 aa11.39□□□□□ -0.59
HSPG2-204ENST00000412328 A0A1B0GUT8 65 aa11.39□□□□□ -0.59
HSPG2-204ENST00000412328 MIAQ16674 131 aa11.39□□□□□ -0.59
HSPG2-204ENST00000412328 NUP35Q8NFH5 326 aa11.39□□□□□ -0.59
HSPG2-204ENST00000412328 DEFB104AQ8WTQ1 72 aa11.39□□□□□ -0.59
HSPG2-204ENST00000412328 TMEM243Q9BU79 118 aa11.39□□□□□ -0.59
HSPG2-204ENST00000412328 TMEM191AQ9H0A3 160 aa11.39□□□□□ -0.59
HSPG2-204ENST00000412328 TRBV6-5A0A0K0K1A5 114 aa11.38□□□□□ -0.59
HSPG2-204ENST00000412328 A0A1B0GUV1 79 aa11.38□□□□□ -0.59
HSPG2-204ENST00000412328 CRPP02741 224 aa11.38□□□□□ -0.59
HSPG2-204ENST00000412328 CLPSL2Q6UWE3 100 aa11.38□□□□□ -0.59
HSPG2-204ENST00000412328 TMEM70Q9BUB7 260 aa11.38□□□□□ -0.59
HSPG2-204ENST00000412328 C1orf43Q9BWL3 253 aa11.38□□□□□ -0.59
HSPG2-204ENST00000412328 FAM30AQ9NZY2 134 aa11.38□□□□□ -0.59
HSPG2-204ENST00000412328 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.37□□□□□ -0.59
HSPG2-204ENST00000412328 PEA15Q15121 130 aa11.37□□□□□ -0.59
HSPG2-204ENST00000412328 ADIRFQ15847 76 aa11.37□□□□□ -0.59
HSPG2-204ENST00000412328 LINC00269Q8N2A0 174 aa11.37□□□□□ -0.59
HSPG2-204ENST00000412328 SMIM27A0A1W2PRY6 76 aa11.36□□□□□ -0.59
HSPG2-204ENST00000412328 SDHAF1A6NFY7 115 aa11.36□□□□□ -0.59
HSPG2-204ENST00000412328 RPS10P46783 165 aaKnown RBP11.36□□□□□ -0.59
HSPG2-204ENST00000412328 HAMPP81172 84 aa11.36□□□□□ -0.59
HSPG2-204ENST00000412328 COTL1Q14019 142 aa11.36□□□□□ -0.59
HSPG2-204ENST00000412328 RAB4AP20338 218 aa11.35□□□□□ -0.59
HSPG2-204ENST00000412328 AMTP48728 403 aa11.35□□□□□ -0.59
HSPG2-204ENST00000412328 REG3AQ06141 175 aa11.35□□□□□ -0.59
HSPG2-204ENST00000412328 SMIM15Q7Z3B0 74 aa11.35□□□□□ -0.59
HSPG2-204ENST00000412328 AMN1Q8IY45 258 aa11.35□□□□□ -0.59
HSPG2-204ENST00000412328 NCR2O95944 276 aa11.34□□□□□ -0.59
HSPG2-204ENST00000412328 BORCS7Q96B45 105 aa11.34□□□□□ -0.59
HSPG2-204ENST00000412328 NAT8BQ9UHF3 227 aa11.34□□□□□ -0.59
HSPG2-204ENST00000412328 TSHBP01222 138 aa11.33□□□□□ -0.6
HSPG2-204ENST00000412328 LINC01620Q4KN68 170 aa11.33□□□□□ -0.6
HSPG2-204ENST00000412328 USP17L23D6RBM5 183 aa11.32□□□□□ -0.6
HSPG2-204ENST00000412328 HLA-DQA1P01909 254 aa11.32□□□□□ -0.6
HSPG2-204ENST00000412328 POLR2KP53803 58 aaKnown RBP11.32□□□□□ -0.6
HSPG2-204ENST00000412328 NRACQ8N912 160 aa11.32□□□□□ -0.6
HSPG2-204ENST00000412328 MRAP2Q96G30 205 aa11.32□□□□□ -0.6
HSPG2-204ENST00000412328 TRBV27A0A0K0K1C4 114 aa11.31□□□□□ -0.6
HSPG2-204ENST00000412328 ESDP10768 282 aa11.31□□□□□ -0.6
HSPG2-204ENST00000412328 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-204ENST00000412328 A0A1B0GXF2 115 aa11.3□□□□□ -0.6
HSPG2-204ENST00000412328 IGKV2-29A2NJV5 120 aaPredicted RBP11.3□□□□□ -0.6
HSPG2-204ENST00000412328 SMKR1H3BMG3 65 aa11.3□□□□□ -0.6
HSPG2-204ENST00000412328 I3L3M4 83 aa11.3□□□□□ -0.6
HSPG2-204ENST00000412328 APCSP02743 223 aa11.3□□□□□ -0.6
HSPG2-204ENST00000412328 RIGQ13278 110 aa11.3□□□□□ -0.6
HSPG2-204ENST00000412328 IGLV10-54A0A075B6I4 117 aa11.29□□□□□ -0.6
HSPG2-204ENST00000412328 H7C423 109 aa11.29□□□□□ -0.6
HSPG2-204ENST00000412328 PRSS1P07477 247 aa11.29□□□□□ -0.6
HSPG2-204ENST00000412328 IFITM2Q01629 132 aa11.29□□□□□ -0.6
HSPG2-204ENST00000412328 Q5VSD8 79 aa11.29□□□□□ -0.6
HSPG2-204ENST00000412328 TMEM242Q9NWH2 141 aa11.29□□□□□ -0.6
HSPG2-204ENST00000412328 MYCBP2O75592 4640 aa11.29□□□□□ -0.6
HSPG2-204ENST00000412328 TRAV8-4A0A0B4J246 113 aa11.28□□□□□ -0.6
HSPG2-204ENST00000412328 UBE2L6O14933 153 aa11.28□□□□□ -0.6
HSPG2-204ENST00000412328 C14orf177Q52M58 125 aa11.28□□□□□ -0.6
HSPG2-204ENST00000412328 FAM104BQ5XKR9 115 aa11.28□□□□□ -0.6
HSPG2-204ENST00000412328 ST20Q9HBF5 79 aa11.28□□□□□ -0.6
HSPG2-204ENST00000412328 SRRM2Q9UQ35 2752 aaKnown RBP11.28□□□□□ -0.6
HSPG2-204ENST00000412328 EPM2AB3EWF7 344 aa11.27□□□□□ -0.61
HSPG2-204ENST00000412328 FGF6P10767 208 aa11.27□□□□□ -0.61
HSPG2-204ENST00000412328 MRPL51Q4U2R6 128 aaKnown RBP11.27□□□□□ -0.61
HSPG2-204ENST00000412328 CLLU1Q5K131 121 aa11.27□□□□□ -0.61
HSPG2-204ENST00000412328 SMR3BP02814 79 aaPredicted RBP11.26□□□□□ -0.61
HSPG2-204ENST00000412328 PKHD1L1Q86WI1 4243 aa11.25□□□□□ -0.61
HSPG2-204ENST00000412328 A0A1B0GW15 77 aa11.25□□□□□ -0.61
HSPG2-204ENST00000412328 ZNF25P17030 456 aaPredicted RBP11.25□□□□□ -0.61
HSPG2-204ENST00000412328 SCXQ7RTU7 201 aa11.25□□□□□ -0.61
HSPG2-204ENST00000412328 MRPL52Q86TS9 123 aaKnown RBP11.25□□□□□ -0.61
HSPG2-204ENST00000412328 PMCHP20382 165 aa11.24□□□□□ -0.61
HSPG2-204ENST00000412328 CAMPP49913 170 aa11.24□□□□□ -0.61
HSPG2-204ENST00000412328 SUMO2P61956 95 aaKnown RBP11.24□□□□□ -0.61
HSPG2-204ENST00000412328 MRPL54Q6P161 138 aaKnown RBP11.24□□□□□ -0.61
HSPG2-204ENST00000412328 C15orf56Q8N910 161 aa11.24□□□□□ -0.61
HSPG2-204ENST00000412328 ADCYAP1P18509 176 aa11.23□□□□□ -0.61
HSPG2-204ENST00000412328 HBBP68871 147 aa11.23□□□□□ -0.61
HSPG2-204ENST00000412328 TRBV24-1A0A075B6N3 115 aa11.22□□□□□ -0.61
HSPG2-204ENST00000412328 CNBPP62633 177 aaKnown RBP11.22□□□□□ -0.61
HSPG2-204ENST00000412328 PNRC1Q12796 327 aaPredicted RBP11.22□□□□□ -0.61
HSPG2-204ENST00000412328 C7orf77A4D0Y5 90 aa11.21□□□□□ -0.61
HSPG2-204ENST00000412328 LINC00862A6NCI5 91 aa11.21□□□□□ -0.61
HSPG2-204ENST00000412328 SLPIP03973 132 aa11.21□□□□□ -0.61
HSPG2-204ENST00000412328 RAB14P61106 215 aa11.21□□□□□ -0.61
HSPG2-204ENST00000412328 RPL32P62910 135 aaKnown RBP11.21□□□□□ -0.61
HSPG2-204ENST00000412328 AMMECR1LQ6DCA0 310 aa11.21□□□□□ -0.61
HSPG2-204ENST00000412328 DGAT2L7PQ6IED9 249 aa11.21□□□□□ -0.61
HSPG2-204ENST00000412328 RNASEKQ6P5S7 137 aaKnown RBP11.21□□□□□ -0.61
HSPG2-204ENST00000412328 C9orf163Q8N9P6 203 aa11.21□□□□□ -0.61
HSPG2-204ENST00000412328 GAGE12HA6NDE8 117 aa11.2□□□□□ -0.62
HSPG2-204ENST00000412328 PPP1R17O96001 155 aa11.2□□□□□ -0.62
HSPG2-204ENST00000412328 KRTAP10-4P60372 401 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-204ENST00000412328 ATP5L2Q7Z4Y8 100 aa11.2□□□□□ -0.62
HSPG2-204ENST00000412328 CLRN3Q8NCR9 226 aa11.2□□□□□ -0.62
HSPG2-204ENST00000412328 OR5A1Q8NGJ0 315 aa11.2□□□□□ -0.62
HSPG2-204ENST00000412328 CHCHD10Q8WYQ3 142 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms