RNA–Protein interactions for RNA: ENST00000412256.1

RAB11FIP3-202, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-202ENST00000412256 TRGC1P0CF51 173 aa8.84□□□□□ -0.99
RAB11FIP3-202ENST00000412256 LYZL1Q6UWQ5 148 aa8.84□□□□□ -0.99
RAB11FIP3-202ENST00000412256 MANBALQ9NQG1 85 aa8.84□□□□□ -0.99
RAB11FIP3-202ENST00000412256 BCL2L11O43521 198 aa8.83□□□□□ -1
RAB11FIP3-202ENST00000412256 NTF3P20783 257 aa8.83□□□□□ -1
RAB11FIP3-202ENST00000412256 AMTP48728 403 aa8.83□□□□□ -1
RAB11FIP3-202ENST00000412256 GNG4P50150 75 aa8.83□□□□□ -1
RAB11FIP3-202ENST00000412256 EIF5AP63241 154 aaKnown RBP8.83□□□□□ -1
RAB11FIP3-202ENST00000412256 COTL1Q14019 142 aa8.83□□□□□ -1
RAB11FIP3-202ENST00000412256 CFAP161Q6P656 301 aa8.83□□□□□ -1
RAB11FIP3-202ENST00000412256 SPACA4Q8TDM5 124 aa8.83□□□□□ -1
RAB11FIP3-202ENST00000412256 C7orf33Q8WU49 177 aa8.83□□□□□ -1
RAB11FIP3-202ENST00000412256 C11orf52Q96A22 123 aa8.83□□□□□ -1
RAB11FIP3-202ENST00000412256 PGLYRP4Q96LB8 373 aa8.83□□□□□ -1
RAB11FIP3-202ENST00000412256 C19orf71A6NCJ1 209 aa8.82□□□□□ -1
RAB11FIP3-202ENST00000412256 HMSDA8MTL9 139 aa8.82□□□□□ -1
RAB11FIP3-202ENST00000412256 PHOX2AO14813 284 aa8.82□□□□□ -1
RAB11FIP3-202ENST00000412256 COX6A2Q02221 97 aa8.82□□□□□ -1
RAB11FIP3-202ENST00000412256 GTSF1Q8WW33 167 aa8.82□□□□□ -1
RAB11FIP3-202ENST00000412256 RPS10P46783 165 aaKnown RBP8.81□□□□□ -1
RAB11FIP3-202ENST00000412256 TWIST1Q15672 202 aa8.81□□□□□ -1
RAB11FIP3-202ENST00000412256 MAJINQ3KP22 176 aa8.81□□□□□ -1
RAB11FIP3-202ENST00000412256 HIGD2BQ4VC39 106 aa8.81□□□□□ -1
RAB11FIP3-202ENST00000412256 PLAC8Q9NZF1 115 aa8.81□□□□□ -1
RAB11FIP3-202ENST00000412256 IGKV2-24A0A0C4DH68 120 aa8.8□□□□□ -1
RAB11FIP3-202ENST00000412256 AMMECR1LQ6DCA0 310 aa8.8□□□□□ -1
RAB11FIP3-202ENST00000412256 C15orf56Q8N910 161 aa8.8□□□□□ -1
RAB11FIP3-202ENST00000412256 PRSS3P2Q8NHM4 247 aa8.8□□□□□ -1
RAB11FIP3-202ENST00000412256 MED9Q9NWA0 146 aa8.8□□□□□ -1
RAB11FIP3-202ENST00000412256 TRAV1-1A0A0B4J248 108 aa8.79□□□□□ -1
RAB11FIP3-202ENST00000412256 TEX46H3BTG2 121 aa8.79□□□□□ -1
RAB11FIP3-202ENST00000412256 RNASEKQ6P5S7 137 aaKnown RBP8.79□□□□□ -1
RAB11FIP3-202ENST00000412256 C9orf62Q8N4C0 152 aa8.79□□□□□ -1
RAB11FIP3-202ENST00000412256 LYPD6BQ8NI32 183 aa8.79□□□□□ -1
RAB11FIP3-202ENST00000412256 BIN3Q9NQY0 253 aa8.79□□□□□ -1
RAB11FIP3-202ENST00000412256 TRAV26-2A0A0B4J265 109 aa8.78□□□□□ -1
RAB11FIP3-202ENST00000412256 NDUFS6O75380 124 aaKnown RBP8.78□□□□□ -1
RAB11FIP3-202ENST00000412256 GATD1Q8NB37 220 aa8.78□□□□□ -1
RAB11FIP3-202ENST00000412256 NUDT10Q8NFP7 164 aa8.78□□□□□ -1
RAB11FIP3-202ENST00000412256 CHCHD10Q8WYQ3 142 aaPredicted RBP8.78□□□□□ -1
RAB11FIP3-202ENST00000412256 SMIM12Q96EX1 92 aa8.78□□□□□ -1
RAB11FIP3-202ENST00000412256 NUDT11Q96G61 164 aa8.78□□□□□ -1
RAB11FIP3-202ENST00000412256 PDE6DO43924 150 aa8.77□□□□□ -1.01
RAB11FIP3-202ENST00000412256 MEF2BQ02080 365 aaPredicted RBP8.77□□□□□ -1.01
RAB11FIP3-202ENST00000412256 STPG4Q8N801 248 aa8.77□□□□□ -1.01
RAB11FIP3-202ENST00000412256 TRBV20OR9-2A0A075B6H5 130 aa8.76□□□□□ -1.01
RAB11FIP3-202ENST00000412256 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.76□□□□□ -1.01
RAB11FIP3-202ENST00000412256 IGKV2-29A2NJV5 120 aaPredicted RBP8.76□□□□□ -1.01
RAB11FIP3-202ENST00000412256 EIF5AL1Q6IS14 154 aaKnown RBP8.76□□□□□ -1.01
RAB11FIP3-202ENST00000412256 Q6ZNX1 250 aa8.76□□□□□ -1.01
RAB11FIP3-202ENST00000412256 CTRLP40313 264 aa8.75□□□□□ -1.01
RAB11FIP3-202ENST00000412256 SMIM15Q7Z3B0 74 aa8.75□□□□□ -1.01
RAB11FIP3-202ENST00000412256 RPL39LQ96EH5 51 aaKnown RBP8.75□□□□□ -1.01
RAB11FIP3-202ENST00000412256 APCSP02743 223 aa8.74□□□□□ -1.01
RAB11FIP3-202ENST00000412256 FGF6P10767 208 aa8.74□□□□□ -1.01
RAB11FIP3-202ENST00000412256 FOXA3P55318 350 aaPredicted RBP8.74□□□□□ -1.01
RAB11FIP3-202ENST00000412256 PRR3P79522 188 aaKnown RBP8.74□□□□□ -1.01
RAB11FIP3-202ENST00000412256 LINC01600Q96MT4 127 aa8.74□□□□□ -1.01
RAB11FIP3-202ENST00000412256 RNASE7Q9H1E1 156 aaKnown RBP8.74□□□□□ -1.01
RAB11FIP3-202ENST00000412256 RPP21Q9H633 154 aaKnown RBP8.74□□□□□ -1.01
RAB11FIP3-202ENST00000412256 A0A096LNI7 61 aa8.73□□□□□ -1.01
RAB11FIP3-202ENST00000412256 GVQW2A0A096LPI5 108 aaPredicted RBP8.73□□□□□ -1.01
RAB11FIP3-202ENST00000412256 H7C423 109 aa8.73□□□□□ -1.01
RAB11FIP3-202ENST00000412256 NCR2O95944 276 aa8.73□□□□□ -1.01
RAB11FIP3-202ENST00000412256 BCL2P10415 239 aa8.73□□□□□ -1.01
RAB11FIP3-202ENST00000412256 XCL1P47992 114 aa8.73□□□□□ -1.01
RAB11FIP3-202ENST00000412256 ODF1Q14990 250 aa8.73□□□□□ -1.01
RAB11FIP3-202ENST00000412256 LRP2P98164 4655 aa8.72□□□□□ -1.01
RAB11FIP3-202ENST00000412256 RNF213Q63HN8 5207 aa8.72□□□□□ -1.01
RAB11FIP3-202ENST00000412256 TNXBP22105 4242 aa8.72□□□□□ -1.01
RAB11FIP3-202ENST00000412256 SDHAF1A6NFY7 115 aa8.72□□□□□ -1.01
RAB11FIP3-202ENST00000412256 PMCHP20382 165 aa8.72□□□□□ -1.01
RAB11FIP3-202ENST00000412256 FOXI1Q12951 378 aa8.72□□□□□ -1.01
RAB11FIP3-202ENST00000412256 OCC1Q8TAD7 63 aa8.72□□□□□ -1.01
RAB11FIP3-202ENST00000412256 LINC00526Q96FQ7 95 aa8.72□□□□□ -1.01
RAB11FIP3-202ENST00000412256 TMEM101Q96IK0 257 aa8.72□□□□□ -1.01
RAB11FIP3-202ENST00000412256 BTF3L4Q96K17 158 aa8.72□□□□□ -1.01
RAB11FIP3-202ENST00000412256 CNFNQ9BYD5 112 aa8.72□□□□□ -1.01
RAB11FIP3-202ENST00000412256 TEX261Q6UWH6 196 aa8.71□□□□□ -1.02
RAB11FIP3-202ENST00000412256 OR5A1Q8NGJ0 315 aa8.71□□□□□ -1.02
RAB11FIP3-202ENST00000412256 LINC00474Q9P2X8 69 aa8.71□□□□□ -1.02
RAB11FIP3-202ENST00000412256 I3L3M4 83 aa8.7□□□□□ -1.02
RAB11FIP3-202ENST00000412256 K7EN84 100 aa8.7□□□□□ -1.02
RAB11FIP3-202ENST00000412256 CCL25O15444 150 aa8.7□□□□□ -1.02
RAB11FIP3-202ENST00000412256 IGHV1-58A0A0C4DH39 117 aa8.69□□□□□ -1.02
RAB11FIP3-202ENST00000412256 LINC00959A0A1B0GUT2 108 aa8.69□□□□□ -1.02
RAB11FIP3-202ENST00000412256 FAM231BA6NCW3 169 aa8.69□□□□□ -1.02
RAB11FIP3-202ENST00000412256 ZNF25P17030 456 aaPredicted RBP8.69□□□□□ -1.02
RAB11FIP3-202ENST00000412256 REG3GQ6UW15 175 aa8.69□□□□□ -1.02
RAB11FIP3-202ENST00000412256 SPINK6Q6UWN8 80 aa8.69□□□□□ -1.02
RAB11FIP3-202ENST00000412256 CARD19Q96LW7 228 aa8.69□□□□□ -1.02
RAB11FIP3-202ENST00000412256 PKIGQ9Y2B9 76 aa8.69□□□□□ -1.02
RAB11FIP3-202ENST00000412256 A0A0J9YXV3 536 aa8.68□□□□□ -1.02
RAB11FIP3-202ENST00000412256 ZNF561-AS1K7EIQ3 104 aa8.68□□□□□ -1.02
RAB11FIP3-202ENST00000412256 GATCO43716 136 aaKnown RBP8.68□□□□□ -1.02
RAB11FIP3-202ENST00000412256 TAGLN2P37802 199 aaKnown RBP8.68□□□□□ -1.02
RAB11FIP3-202ENST00000412256 SS18Q15532 418 aa8.68□□□□□ -1.02
RAB11FIP3-202ENST00000412256 ST20Q9HBF5 79 aa8.67□□□□□ -1.02
RAB11FIP3-202ENST00000412256 A8MWL6 223 aa8.66□□□□□ -1.02
RAB11FIP3-202ENST00000412256 GAS8-AS1O95177 125 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms