RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 IFI27L1Q96BM0 104 aa7.1□□□□□ -1.27
LINC01643-201ENST00000412218 C14orf144Q96I85 54 aa7.1□□□□□ -1.27
LINC01643-201ENST00000412218 TRAV26-2A0A0B4J265 109 aa7.09□□□□□ -1.27
LINC01643-201ENST00000412218 PRSS29PA6NIE9 313 aa7.09□□□□□ -1.27
LINC01643-201ENST00000412218 LINC01549A6NIU2 74 aa7.09□□□□□ -1.27
LINC01643-201ENST00000412218 ATP5LO75964 103 aa7.09□□□□□ -1.27
LINC01643-201ENST00000412218 NUDT3O95989 172 aa7.09□□□□□ -1.27
LINC01643-201ENST00000412218 SUMO2P61956 95 aaKnown RBP7.09□□□□□ -1.27
LINC01643-201ENST00000412218 ZNF415Q09FC8 603 aa7.09□□□□□ -1.27
LINC01643-201ENST00000412218 DAZ2Q13117 558 aaKnown RBP7.09□□□□□ -1.27
LINC01643-201ENST00000412218 LAGE3Q14657 143 aa7.09□□□□□ -1.27
LINC01643-201ENST00000412218 ORMDL2Q53FV1 153 aa7.09□□□□□ -1.27
LINC01643-201ENST00000412218 PIK3CD-AS1Q5SR53 167 aa7.09□□□□□ -1.27
LINC01643-201ENST00000412218 C11orf72Q8NBR9 251 aa7.09□□□□□ -1.27
LINC01643-201ENST00000412218 KIF25-AS1Q9Y6Z4 181 aa7.09□□□□□ -1.27
LINC01643-201ENST00000412218 GAGE12BA1L429 117 aa7.08□□□□□ -1.28
LINC01643-201ENST00000412218 GAGE7O76087 117 aa7.08□□□□□ -1.28
LINC01643-201ENST00000412218 GAS8-AS1O95177 125 aa7.08□□□□□ -1.28
LINC01643-201ENST00000412218 GAGE12FP0CL80 117 aa7.08□□□□□ -1.28
LINC01643-201ENST00000412218 GAGE12GP0CL81 117 aa7.08□□□□□ -1.28
LINC01643-201ENST00000412218 GAGE12IP0CL82 117 aa7.08□□□□□ -1.28
LINC01643-201ENST00000412218 IGLC3P0DOY3 106 aa7.08□□□□□ -1.28
LINC01643-201ENST00000412218 G0S2P27469 103 aa7.08□□□□□ -1.28
LINC01643-201ENST00000412218 ATOH7Q8N100 152 aa7.08□□□□□ -1.28
LINC01643-201ENST00000412218 ZNRF2Q8NHG8 242 aa7.08□□□□□ -1.28
LINC01643-201ENST00000412218 RASL10AQ92737 203 aa7.08□□□□□ -1.28
LINC01643-201ENST00000412218 PTH2Q96A98 100 aa7.08□□□□□ -1.28
LINC01643-201ENST00000412218 TRAV26-1A0A087WT03 109 aa7.07□□□□□ -1.28
LINC01643-201ENST00000412218 H0Y8G0 127 aa7.07□□□□□ -1.28
LINC01643-201ENST00000412218 HNRNPA3P51991 378 aaKnown RBP7.07□□□□□ -1.28
LINC01643-201ENST00000412218 CCL18P55774 89 aa7.07□□□□□ -1.28
LINC01643-201ENST00000412218 Q6ZTI0 123 aa7.07□□□□□ -1.28
LINC01643-201ENST00000412218 MDFICQ9P1T7 246 aa7.07□□□□□ -1.28
LINC01643-201ENST00000412218 LINC00588Q9Y4M8 146 aa7.07□□□□□ -1.28
LINC01643-201ENST00000412218 HERC2O95714 4834 aa7.07□□□□□ -1.28
LINC01643-201ENST00000412218 FAT2Q9NYQ8 4349 aa7.06□□□□□ -1.28
LINC01643-201ENST00000412218 TRBV6-5A0A0K0K1A5 114 aa7.06□□□□□ -1.28
LINC01643-201ENST00000412218 M0R143 59 aa7.06□□□□□ -1.28
LINC01643-201ENST00000412218 LINC00315P59091 139 aa7.06□□□□□ -1.28
LINC01643-201ENST00000412218 C1orf134Q5TEV5 83 aa7.06□□□□□ -1.28
LINC01643-201ENST00000412218 SUMO4Q6EEV6 95 aa7.06□□□□□ -1.28
LINC01643-201ENST00000412218 C18orf15Q96N68 181 aa7.06□□□□□ -1.28
LINC01643-201ENST00000412218 DNAH2Q9P225 4427 aa7.06□□□□□ -1.28
LINC01643-201ENST00000412218 A0A0J9YY99 117 aa7.05□□□□□ -1.28
LINC01643-201ENST00000412218 NBDYA0A0U1RRE5 68 aa7.05□□□□□ -1.28
LINC01643-201ENST00000412218 A8MWV9 139 aa7.05□□□□□ -1.28
LINC01643-201ENST00000412218 F5H697 171 aa7.05□□□□□ -1.28
LINC01643-201ENST00000412218 H3BNG1 76 aa7.05□□□□□ -1.28
LINC01643-201ENST00000412218 H7C1H1 209 aa7.05□□□□□ -1.28
LINC01643-201ENST00000412218 M0R2P5 195 aa7.05□□□□□ -1.28
LINC01643-201ENST00000412218 TCAPO15273 167 aa7.05□□□□□ -1.28
LINC01643-201ENST00000412218 ZNF56Q15929 161 aa7.05□□□□□ -1.28
LINC01643-201ENST00000412218 ZNF876PQ49A33 203 aa7.05□□□□□ -1.28
LINC01643-201ENST00000412218 Q6ZN92 141 aa7.05□□□□□ -1.28
LINC01643-201ENST00000412218 RPL39LQ96EH5 51 aaKnown RBP7.05□□□□□ -1.28
LINC01643-201ENST00000412218 PMCHL2Q9BQD1 86 aa7.05□□□□□ -1.28
LINC01643-201ENST00000412218 C2orf88Q9BSF0 95 aa7.05□□□□□ -1.28
LINC01643-201ENST00000412218 SPXQ9BT56 116 aa7.05□□□□□ -1.28
LINC01643-201ENST00000412218 TRGV2A0A075B6R0 118 aa7.04□□□□□ -1.28
LINC01643-201ENST00000412218 A0A087WWL8 130 aa7.04□□□□□ -1.28
LINC01643-201ENST00000412218 TRGV1A0A0A0MS02 117 aa7.04□□□□□ -1.28
LINC01643-201ENST00000412218 RHODO00212 210 aa7.04□□□□□ -1.28
LINC01643-201ENST00000412218 VCYO14598 125 aa7.04□□□□□ -1.28
LINC01643-201ENST00000412218 TOMM6Q96B49 74 aa7.04□□□□□ -1.28
LINC01643-201ENST00000412218 KIR2DL4Q99706 377 aa7.04□□□□□ -1.28
LINC01643-201ENST00000412218 hDV102S1A0JD36 115 aa7.03□□□□□ -1.28
LINC01643-201ENST00000412218 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.03□□□□□ -1.28
LINC01643-201ENST00000412218 CRYGDP07320 174 aa7.03□□□□□ -1.28
LINC01643-201ENST00000412218 MAJINQ3KP22 176 aa7.03□□□□□ -1.28
LINC01643-201ENST00000412218 FAM74A4Q5TZK3 123 aa7.03□□□□□ -1.28
LINC01643-201ENST00000412218 SLC25A34Q6PIV7 304 aa7.03□□□□□ -1.28
LINC01643-201ENST00000412218 VSIG2Q96IQ7 327 aa7.03□□□□□ -1.28
LINC01643-201ENST00000412218 MRPS16Q9Y3D3 137 aaKnown RBP7.03□□□□□ -1.28
LINC01643-201ENST00000412218 NACAE9PAV3 2078 aa7.02□□□□□ -1.29
LINC01643-201ENST00000412218 DNAH17Q9UFH2 4485 aa7.02□□□□□ -1.29
LINC01643-201ENST00000412218 TRAV12-1A0A0B4J245 112 aa7.02□□□□□ -1.29
LINC01643-201ENST00000412218 TRBV27A0A0K0K1C4 114 aa7.02□□□□□ -1.29
LINC01643-201ENST00000412218 EREGO14944 169 aa7.02□□□□□ -1.29
LINC01643-201ENST00000412218 PRSS1P07477 247 aa7.02□□□□□ -1.29
LINC01643-201ENST00000412218 POLR2KP53803 58 aaKnown RBP7.02□□□□□ -1.29
LINC01643-201ENST00000412218 ODF1Q14990 250 aa7.02□□□□□ -1.29
LINC01643-201ENST00000412218 RHOHQ15669 191 aa7.02□□□□□ -1.29
LINC01643-201ENST00000412218 ESRGQ1W209 222 aa7.02□□□□□ -1.29
LINC01643-201ENST00000412218 C6orf223Q8N319 242 aa7.02□□□□□ -1.29
LINC01643-201ENST00000412218 UPK3BQ9BT76 320 aa7.02□□□□□ -1.29
LINC01643-201ENST00000412218 SNHG12Q9BXW3 62 aa7.02□□□□□ -1.29
LINC01643-201ENST00000412218 JPT2Q9H910 190 aa7.02□□□□□ -1.29
LINC01643-201ENST00000412218 MRPL16Q9NX20 251 aaKnown RBP7.02□□□□□ -1.29
LINC01643-201ENST00000412218 CYSLTR1Q9Y271 337 aa7.02□□□□□ -1.29
LINC01643-201ENST00000412218 KIAA1109Q2LD37 5005 aa7.01□□□□□ -1.29
LINC01643-201ENST00000412218 A0A096LPF7 62 aa7.01□□□□□ -1.29
LINC01643-201ENST00000412218 SDHAF1A6NFY7 115 aa7.01□□□□□ -1.29
LINC01643-201ENST00000412218 M0QY20 66 aa7.01□□□□□ -1.29
LINC01643-201ENST00000412218 DPM2O94777 84 aa7.01□□□□□ -1.29
LINC01643-201ENST00000412218 C2orf66Q6UXQ4 117 aa7.01□□□□□ -1.29
LINC01643-201ENST00000412218 SCGB3A1Q96QR1 104 aa7.01□□□□□ -1.29
LINC01643-201ENST00000412218 KRTAP1-5Q9BYS1 174 aa7.01□□□□□ -1.29
LINC01643-201ENST00000412218 Q9H8V8 135 aa7.01□□□□□ -1.29
LINC01643-201ENST00000412218 A0A087WX48 190 aa7□□□□□ -1.29
LINC01643-201ENST00000412218 IGHV3-53P01767 116 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms