RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 IGLV2-18A0A075B6J9 118 aa12.89□□□□□ -0.35
CDC42-204ENST00000411827 LOC389332A0A1B0GUA5 103 aa12.89□□□□□ -0.35
CDC42-204ENST00000411827 LINC01546A6NGU7 62 aa12.89□□□□□ -0.35
CDC42-204ENST00000411827 H7C423 109 aa12.89□□□□□ -0.35
CDC42-204ENST00000411827 TMEM18Q96B42 140 aa12.89□□□□□ -0.35
CDC42-204ENST00000411827 DNAH7Q8WXX0 4024 aa12.89□□□□□ -0.35
CDC42-204ENST00000411827 DYNC2H1Q8NCM8 4307 aaKnown RBP12.89□□□□□ -0.35
CDC42-204ENST00000411827 TSHBP01222 138 aa12.88□□□□□ -0.35
CDC42-204ENST00000411827 IFI27P40305 119 aaPredicted RBP12.88□□□□□ -0.35
CDC42-204ENST00000411827 ESRGQ1W209 222 aa12.88□□□□□ -0.35
CDC42-204ENST00000411827 CHCHD1Q96BP2 118 aaKnown RBP12.88□□□□□ -0.35
CDC42-204ENST00000411827 AP5S1Q9NUS5 200 aa12.88□□□□□ -0.35
CDC42-204ENST00000411827 MRPS16Q9Y3D3 137 aaKnown RBP12.88□□□□□ -0.35
CDC42-204ENST00000411827 IGHV3-38A0A0C4DH36 116 aa12.87□□□□□ -0.35
CDC42-204ENST00000411827 LINC00614P0C842 121 aa12.87□□□□□ -0.35
CDC42-204ENST00000411827 AMTP48728 403 aa12.87□□□□□ -0.35
CDC42-204ENST00000411827 LAGE3Q14657 143 aa12.87□□□□□ -0.35
CDC42-204ENST00000411827 BAGE3Q86Y29 109 aa12.87□□□□□ -0.35
CDC42-204ENST00000411827 UPK3BQ9BT76 320 aa12.87□□□□□ -0.35
CDC42-204ENST00000411827 TMEM243Q9BU79 118 aa12.87□□□□□ -0.35
CDC42-204ENST00000411827 HIST1H2BKO60814 126 aa12.86□□□□□ -0.35
CDC42-204ENST00000411827 HIST1H2BJP06899 126 aa12.86□□□□□ -0.35
CDC42-204ENST00000411827 HIST1H2BOP23527 126 aa12.86□□□□□ -0.35
CDC42-204ENST00000411827 HIST1H2BBP33778 126 aa12.86□□□□□ -0.35
CDC42-204ENST00000411827 HIST1H2BDP58876 126 aa12.86□□□□□ -0.35
CDC42-204ENST00000411827 HIST1H2BCP62807 126 aa12.86□□□□□ -0.35
CDC42-204ENST00000411827 HIST2H2BEQ16778 126 aa12.86□□□□□ -0.35
CDC42-204ENST00000411827 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.86□□□□□ -0.35
CDC42-204ENST00000411827 HIST1H2BHQ93079 126 aa12.86□□□□□ -0.35
CDC42-204ENST00000411827 HIST1H2BNQ99877 126 aa12.86□□□□□ -0.35
CDC42-204ENST00000411827 HIST1H2BMQ99879 126 aa12.86□□□□□ -0.35
CDC42-204ENST00000411827 ESDP10768 282 aa12.85□□□□□ -0.35
CDC42-204ENST00000411827 NTM-AS1Q6ZSK4 140 aa12.85□□□□□ -0.35
CDC42-204ENST00000411827 NIT1Q86X76 327 aa12.85□□□□□ -0.35
CDC42-204ENST00000411827 CHCHD7Q9BUK0 85 aa12.85□□□□□ -0.35
CDC42-204ENST00000411827 K7EP13 123 aa12.84□□□□□ -0.35
CDC42-204ENST00000411827 UBE2DNLQ8IWF7 75 aa12.84□□□□□ -0.35
CDC42-204ENST00000411827 UBE2L6O14933 153 aa12.83□□□□□ -0.36
CDC42-204ENST00000411827 LGALS9CQ6DKI2 356 aa12.83□□□□□ -0.36
CDC42-204ENST00000411827 CHCHD5Q9BSY4 110 aa12.83□□□□□ -0.36
CDC42-204ENST00000411827 RYR2Q92736 4967 aa12.82□□□□□ -0.36
CDC42-204ENST00000411827 COA6Q5JTJ3 125 aaKnown RBP12.82□□□□□ -0.36
CDC42-204ENST00000411827 C20orf203Q8NBC4 194 aa12.82□□□□□ -0.36
CDC42-204ENST00000411827 LINC00588Q9Y4M8 146 aa12.82□□□□□ -0.36
CDC42-204ENST00000411827 ZNF25P17030 456 aaPredicted RBP12.81□□□□□ -0.36
CDC42-204ENST00000411827 RNASEKQ6P5S7 137 aaKnown RBP12.81□□□□□ -0.36
CDC42-204ENST00000411827 TIMM21Q9BVV7 248 aa12.81□□□□□ -0.36
CDC42-204ENST00000411827 CYSLTR1Q9Y271 337 aa12.81□□□□□ -0.36
CDC42-204ENST00000411827 A0A1B0GUV1 79 aa12.8□□□□□ -0.36
CDC42-204ENST00000411827 HSBP1O75506 76 aa12.8□□□□□ -0.36
CDC42-204ENST00000411827 NPSP0C0P6 89 aa12.8□□□□□ -0.36
CDC42-204ENST00000411827 MRPL52Q86TS9 123 aaKnown RBP12.8□□□□□ -0.36
CDC42-204ENST00000411827 CSDC2Q9Y534 153 aaKnown RBP12.8□□□□□ -0.36
CDC42-204ENST00000411827 A0A087WX48 190 aa12.79□□□□□ -0.36
CDC42-204ENST00000411827 SIVA1O15304 175 aa12.79□□□□□ -0.36
CDC42-204ENST00000411827 SPANXA1Q9NS26 97 aa12.79□□□□□ -0.36
CDC42-204ENST00000411827 TRAV9-2A0A087WT02 112 aa12.78□□□□□ -0.36
CDC42-204ENST00000411827 DNAH10OSP0CZ25 163 aa12.78□□□□□ -0.36
CDC42-204ENST00000411827 LINC01556Q5JQF7 62 aa12.78□□□□□ -0.36
CDC42-204ENST00000411827 AMMECR1LQ6DCA0 310 aa12.78□□□□□ -0.36
CDC42-204ENST00000411827 TMEM262E9PQX1 116 aa12.77□□□□□ -0.37
CDC42-204ENST00000411827 SERF1AO75920 110 aa12.77□□□□□ -0.37
CDC42-204ENST00000411827 HBDP02042 147 aa12.77□□□□□ -0.37
CDC42-204ENST00000411827 PAPPA-AS1Q5QFB9 102 aa12.77□□□□□ -0.37
CDC42-204ENST00000411827 URB1-AS1Q96HZ7 61 aa12.77□□□□□ -0.37
CDC42-204ENST00000411827 TMEM101Q96IK0 257 aa12.77□□□□□ -0.37
CDC42-204ENST00000411827 PYGO1Q9Y3Y4 419 aa12.77□□□□□ -0.37
CDC42-204ENST00000411827 S100A6P06703 90 aa12.76□□□□□ -0.37
CDC42-204ENST00000411827 BTF3P20290 206 aaKnown RBP12.76□□□□□ -0.37
CDC42-204ENST00000411827 DGAT2L7PQ6IED9 249 aa12.76□□□□□ -0.37
CDC42-204ENST00000411827 C2orf66Q6UXQ4 117 aa12.76□□□□□ -0.37
CDC42-204ENST00000411827 C10orf126Q8N4M7 172 aa12.76□□□□□ -0.37
CDC42-204ENST00000411827 TOMM6Q96B49 74 aa12.76□□□□□ -0.37
CDC42-204ENST00000411827 Q9H8V8 135 aa12.76□□□□□ -0.37
CDC42-204ENST00000411827 STARD9Q9P2P6 4700 aa12.76□□□□□ -0.37
CDC42-204ENST00000411827 FGF6P10767 208 aa12.75□□□□□ -0.37
CDC42-204ENST00000411827 NDUFA6P56556 154 aa12.75□□□□□ -0.37
CDC42-204ENST00000411827 GAGE6Q13070 117 aa12.74□□□□□ -0.37
CDC42-204ENST00000411827 TTC32Q5I0X7 151 aa12.74□□□□□ -0.37
CDC42-204ENST00000411827 ERASQ7Z444 233 aa12.74□□□□□ -0.37
CDC42-204ENST00000411827 WFDC10BQ8IUB3 73 aa12.74□□□□□ -0.37
CDC42-204ENST00000411827 OR5A1Q8NGJ0 315 aa12.74□□□□□ -0.37
CDC42-204ENST00000411827 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.73□□□□□ -0.37
CDC42-204ENST00000411827 IGKV2-29A2NJV5 120 aaPredicted RBP12.73□□□□□ -0.37
CDC42-204ENST00000411827 MRPS36P82909 103 aaKnown RBP12.73□□□□□ -0.37
CDC42-204ENST00000411827 DEFB104AQ8WTQ1 72 aa12.73□□□□□ -0.37
CDC42-204ENST00000411827 TMEM141Q96I45 108 aa12.73□□□□□ -0.37
CDC42-204ENST00000411827 PACRGQ96M98 296 aaPredicted RBP12.73□□□□□ -0.37
CDC42-204ENST00000411827 TIMM17AQ99595 171 aa12.73□□□□□ -0.37
CDC42-204ENST00000411827 UBE2D4Q9Y2X8 147 aa12.73□□□□□ -0.37
CDC42-204ENST00000411827 ATP5LO75964 103 aa12.72□□□□□ -0.37
CDC42-204ENST00000411827 RBX1P62877 108 aa12.72□□□□□ -0.37
CDC42-204ENST00000411827 LINC00476Q8WZB0 136 aa12.72□□□□□ -0.37
CDC42-204ENST00000411827 TENM2Q9NT68 2774 aa12.72□□□□□ -0.37
CDC42-204ENST00000411827 DNAH1Q9P2D7 4330 aa12.71□□□□□ -0.37
CDC42-204ENST00000411827 SCGB3A1Q96QR1 104 aa12.71□□□□□ -0.37
CDC42-204ENST00000411827 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.7□□□□□ -0.38
CDC42-204ENST00000411827 LINC00310P59036 64 aa12.7□□□□□ -0.38
CDC42-204ENST00000411827 RPL39P62891 51 aaKnown RBP12.7□□□□□ -0.38
CDC42-204ENST00000411827 MPV17L2Q567V2 206 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms