RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 IGKV4-1P06312 121 aa13.81□□□□□ -0.2
HCG11-201ENST00000411553 A0A0J9YXY3 114 aa13.8□□□□□ -0.2
HCG11-201ENST00000411553 HIST2H2BDQ6DRA6 164 aa13.8□□□□□ -0.2
HCG11-201ENST00000411553 LINC00467Q9BRT7 94 aa13.8□□□□□ -0.2
HCG11-201ENST00000411553 FAM110AQ9BQ89 295 aa13.8□□□□□ -0.2
HCG11-201ENST00000411553 FSTL3O95633 263 aa13.79□□□□□ -0.2
HCG11-201ENST00000411553 TAX1BP3O14907 124 aa13.79□□□□□ -0.2
HCG11-201ENST00000411553 Q6ZSV7 163 aa13.79□□□□□ -0.2
HCG11-201ENST00000411553 BDP1A6H8Y1 2624 aa13.79□□□□□ -0.2
HCG11-201ENST00000411553 MIFP14174 115 aa13.79□□□□□ -0.2
HCG11-201ENST00000411553 BPY2O14599 106 aa13.78□□□□□ -0.2
HCG11-201ENST00000411553 A0A1B0GXF2 115 aa13.78□□□□□ -0.2
HCG11-201ENST00000411553 C20orf173Q96LM9 149 aa13.78□□□□□ -0.2
HCG11-201ENST00000411553 IGLC6P0CF74 106 aa13.78□□□□□ -0.2
HCG11-201ENST00000411553 A0A096LNI7 61 aa13.77□□□□□ -0.2
HCG11-201ENST00000411553 LINC00482Q8N8I6 264 aa13.77□□□□□ -0.2
HCG11-201ENST00000411553 LINC00322Q6ZN03 302 aaPredicted RBP13.77□□□□□ -0.21
HCG11-201ENST00000411553 PLXNB3Q9ULL4 1909 aa13.77□□□□□ -0.21
HCG11-201ENST00000411553 NEXN-AS1Q8NBZ9 246 aa13.77□□□□□ -0.21
HCG11-201ENST00000411553 TNRC6BQ9UPQ9 1833 aaKnown RBP13.77□□□□□ -0.21
HCG11-201ENST00000411553 ADAMTS9Q9P2N4 1935 aa13.76□□□□□ -0.21
HCG11-201ENST00000411553 TECTAO75443 2155 aa13.76□□□□□ -0.21
HCG11-201ENST00000411553 NDUFC2O95298 119 aa13.75□□□□□ -0.21
HCG11-201ENST00000411553 IGLV2-8P01709 118 aa13.75□□□□□ -0.21
HCG11-201ENST00000411553 C22orf34Q6ZV56 151 aa13.75□□□□□ -0.21
HCG11-201ENST00000411553 BRWD1-AS2P59051 145 aa13.75□□□□□ -0.21
HCG11-201ENST00000411553 ZNF843Q8N446 348 aa13.75□□□□□ -0.21
HCG11-201ENST00000411553 NOTCH2Q04721 2471 aa13.74□□□□□ -0.21
HCG11-201ENST00000411553 EBI3Q14213 229 aa13.74□□□□□ -0.21
HCG11-201ENST00000411553 SPATA12Q7Z6I5 190 aa13.74□□□□□ -0.21
HCG11-201ENST00000411553 CDKN2A-AS1Q9UH64 79 aa13.74□□□□□ -0.21
HCG11-201ENST00000411553 ACACBO00763 2458 aa13.74□□□□□ -0.21
HCG11-201ENST00000411553 CFAP126Q5VTH2 177 aa13.73□□□□□ -0.21
HCG11-201ENST00000411553 ATRXP46100 2492 aa13.73□□□□□ -0.21
HCG11-201ENST00000411553 TRBV6-8A0A0A6YYG3 113 aa13.73□□□□□ -0.21
HCG11-201ENST00000411553 C1orf229Q6ZS94 237 aaPredicted RBP13.73□□□□□ -0.21
HCG11-201ENST00000411553 TMEM131Q92545 1883 aa13.73□□□□□ -0.21
HCG11-201ENST00000411553 TCL1BO95988 128 aa13.72□□□□□ -0.21
HCG11-201ENST00000411553 CASC2Q6XLA1 102 aa13.72□□□□□ -0.21
HCG11-201ENST00000411553 LY6G6DO95868 133 aa13.72□□□□□ -0.21
HCG11-201ENST00000411553 FAM19A5Q7Z5A7 132 aaPredicted RBP13.72□□□□□ -0.21
HCG11-201ENST00000411553 UPK3BQ9BT76 320 aa13.72□□□□□ -0.21
HCG11-201ENST00000411553 TRBV6-4A0A1B0GX49 114 aa13.72□□□□□ -0.21
HCG11-201ENST00000411553 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.72□□□□□ -0.21
HCG11-201ENST00000411553 TRAV10A0A0B4J240 114 aa13.72□□□□□ -0.21
HCG11-201ENST00000411553 LY6LH3BQJ8 138 aa13.72□□□□□ -0.21
HCG11-201ENST00000411553 PTH2Q96A98 100 aa13.72□□□□□ -0.21
HCG11-201ENST00000411553 ZFAND3Q9H8U3 227 aa13.71□□□□□ -0.21
HCG11-201ENST00000411553 IBA57-AS1B1ANH7 110 aa13.71□□□□□ -0.21
HCG11-201ENST00000411553 LINC00643Q86TS7 51 aa13.71□□□□□ -0.21
HCG11-201ENST00000411553 C11orf71Q6IPW1 123 aa13.7□□□□□ -0.22
HCG11-201ENST00000411553 MLST8Q9BVC4 326 aa13.7□□□□□ -0.22
HCG11-201ENST00000411553 IGLV4-3A0A075B6K6 122 aa13.7□□□□□ -0.22
HCG11-201ENST00000411553 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.7□□□□□ -0.22
HCG11-201ENST00000411553 C7orf33Q8WU49 177 aa13.7□□□□□ -0.22
HCG11-201ENST00000411553 J3KT08 172 aa13.7□□□□□ -0.22
HCG11-201ENST00000411553 C10orf99Q6UWK7 81 aa13.69□□□□□ -0.22
HCG11-201ENST00000411553 TMEM223A0PJW6 202 aa13.69□□□□□ -0.22
HCG11-201ENST00000411553 SYCNQ0VAF6 134 aa13.69□□□□□ -0.22
HCG11-201ENST00000411553 ZNF22P17026 224 aaPredicted RBP13.68□□□□□ -0.22
HCG11-201ENST00000411553 GDF5OSQ5U4N7 250 aa13.68□□□□□ -0.22
HCG11-201ENST00000411553 PSMG3-AS1Q96PY0 264 aa13.68□□□□□ -0.22
HCG11-201ENST00000411553 XAGE1AQ9HD64 81 aa13.68□□□□□ -0.22
HCG11-201ENST00000411553 SPG11Q96JI7 2443 aa13.68□□□□□ -0.22
HCG11-201ENST00000411553 TRAV23DV6A0A075B6W5 121 aa13.68□□□□□ -0.22
HCG11-201ENST00000411553 M0QY20 66 aa13.68□□□□□ -0.22
HCG11-201ENST00000411553 Q6ZPA2 131 aa13.67□□□□□ -0.22
HCG11-201ENST00000411553 SPANXB1Q9NS25 103 aaPredicted RBP13.67□□□□□ -0.22
HCG11-201ENST00000411553 C2orf16Q68DN1 1984 aa13.67□□□□□ -0.22
HCG11-201ENST00000411553 TTC28Q96AY4 2481 aa13.67□□□□□ -0.22
HCG11-201ENST00000411553 OBSL1O75147 1896 aa13.67□□□□□ -0.22
HCG11-201ENST00000411553 COL4A3Q01955 1670 aa13.66□□□□□ -0.22
HCG11-201ENST00000411553 BBC3Q96PG8 261 aaPredicted RBP13.66□□□□□ -0.22
HCG11-201ENST00000411553 ZNF702PQ9H963 129 aa13.66□□□□□ -0.22
HCG11-201ENST00000411553 OTOGLQ3ZCN5 2332 aa13.66□□□□□ -0.22
HCG11-201ENST00000411553 EIF4EBP1Q13541 118 aaPredicted RBP13.66□□□□□ -0.22
HCG11-201ENST00000411553 USP17L23D6RBM5 183 aa13.66□□□□□ -0.22
HCG11-201ENST00000411553 LINC00308Q8TCZ7 52 aa13.65□□□□□ -0.22
HCG11-201ENST00000411553 ANKHD1Q8IWZ3 2542 aaKnown RBP13.65□□□□□ -0.22
HCG11-201ENST00000411553 Q8N976 141 aa13.65□□□□□ -0.22
HCG11-201ENST00000411553 WNK1Q9H4A3 2382 aa13.64□□□□□ -0.23
HCG11-201ENST00000411553 SLPIP03973 132 aa13.64□□□□□ -0.23
HCG11-201ENST00000411553 PROK1P58294 105 aa13.63□□□□□ -0.23
HCG11-201ENST00000411553 PIK3CD-AS1Q5SR53 167 aa13.63□□□□□ -0.23
HCG11-201ENST00000411553 LINC01006Q8NI28 216 aa13.63□□□□□ -0.23
HCG11-201ENST00000411553 G3V4G9 280 aa13.63□□□□□ -0.23
HCG11-201ENST00000411553 CUL9Q8IWT3 2517 aa13.63□□□□□ -0.23
HCG11-201ENST00000411553 IGLV2-18A0A075B6J9 118 aa13.63□□□□□ -0.23
HCG11-201ENST00000411553 RNASE8Q8TDE3 154 aaKnown RBP13.63□□□□□ -0.23
HCG11-201ENST00000411553 FREM1Q5H8C1 2179 aa13.62□□□□□ -0.23
HCG11-201ENST00000411553 ZNF295-AS1Q8N0V1 137 aa13.62□□□□□ -0.23
HCG11-201ENST00000411553 CSPG4Q6UVK1 2322 aa13.61□□□□□ -0.23
HCG11-201ENST00000411553 DENND4AQ7Z401 1863 aa13.61□□□□□ -0.23
HCG11-201ENST00000411553 RBX1P62877 108 aa13.61□□□□□ -0.23
HCG11-201ENST00000411553 CRIP1P50238 77 aa13.6□□□□□ -0.23
HCG11-201ENST00000411553 KPRPQ5T749 579 aaPredicted RBP13.6□□□□□ -0.23
HCG11-201ENST00000411553 SCXQ7RTU7 201 aa13.6□□□□□ -0.23
HCG11-201ENST00000411553 MBD6Q96DN6 1003 aa13.6□□□□□ -0.23
HCG11-201ENST00000411553 UBE2D1P51668 147 aa13.6□□□□□ -0.23
HCG11-201ENST00000411553 DCANP1Q8TF63 244 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 226.5 ms