RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 DEFA3P59666 94 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 SSTP61278 116 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 SERF2P84101 59 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 SRSF3P84103 164 aaKnown RBP1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 FOXI1Q12951 378 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 COTL1Q14019 142 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 AMMECR1LQ6DCA0 310 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 EIF5AL1Q6IS14 154 aaKnown RBP1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 RNASEKQ6P5S7 137 aaKnown RBP1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 RASL11AQ6T310 242 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 PHF5AQ7RTV0 110 aaKnown RBP1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 OR5A1Q8NGJ0 315 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 PPP1R1CQ8WVI7 109 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 LINC00526Q96FQ7 95 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 FMC1Q96HJ9 113 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 BTF3L4Q96K17 158 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 CAMK2N2Q96S95 79 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 ACTR3CQ9C0K3 210 aaPredicted RBP1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 NIT2Q9NQR4 276 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 IGLV4-69A0A075B6H9 119 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 IGLV7-46A0A075B6I9 117 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 LINC00959A0A1B0GUT2 108 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 FAM240BA0A1B0GVZ2 78 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 CCDC160A6NGH7 325 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 H7C423 109 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 CCL25O15444 150 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 MPC2O95563 127 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 NCR2O95944 276 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 LTAP01374 205 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 BCL2P10415 239 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 CRYGAP11844 174 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 ZNF25P17030 456 aaPredicted RBP1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 MALP21145 153 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 ATP6V0CP27449 155 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 CAMPP49913 170 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 UBE2G2P60604 165 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 RPL18AQ02543 176 aaKnown RBP1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 SS18Q15532 418 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 TPRXLQ17RH7 258 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 SUMO4Q6EEV6 95 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 CD164L2Q6UWJ8 174 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 TMEM101Q96IK0 257 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 TCEAL7Q9BRU2 100 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 PSMG3Q9BT73 122 aaPredicted RBP1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 CCDC32Q9BV29 185 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 WFDC1Q9HC57 220 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 TNFSF18Q9UNG2 199 aa1.4□□□□□ -2.19
RNU4-53P-201ENST00000410828 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 CTXND1A0A1B0GTU2 59 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 IGKV2-29A2NJV5 120 aaPredicted RBP1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 C19orf71A6NCJ1 209 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 FAM74A7A6NL05 159 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 C1orf196B1AJZ1 125 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 COX7A2LO14548 114 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 ZNF861PO60384 105 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 APCSP02743 223 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 S100A9P06702 114 aaKnown RBP1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 TRGC1P0CF51 173 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 ESDP10768 282 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 NTF3P20783 257 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 AKR1C3P42330 323 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 FHITP49789 147 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 H2BFSP57053 126 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 RPS20P60866 119 aaKnown RBP1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 UBE2BP63146 152 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 MEF2BQ02080 365 aaPredicted RBP1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 TMEM241Q24JQ0 296 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 RNF151Q2KHN1 245 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 CST9LP1Q5W188 147 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 MZT2BQ6NZ67 158 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 BAGE2Q86Y30 109 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 KRTAP11-1Q8IUC1 163 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 NUP35Q8NFH5 326 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 OR2D3Q8NGH3 330 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 TYMSOSQ8TAI1 123 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 STOML3Q8TAV4 291 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 C2orf48Q96LS8 159 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 IMMP2LQ96T52 175 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 RETNLBQ9BQ08 111 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 TPPP3Q9BW30 176 aa1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 RPP21Q9H633 154 aaKnown RBP1.39□□□□□ -2.19
RNU4-53P-201ENST00000410828 A0A087X002 238 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 FAM168BA1KXE4 195 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 XKRY2A2RUG3 117 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 SDHAF1A6NFY7 115 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 KRTAP9-7A8MTY7 169 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 F2Z2F3 143 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 INMT-MINDY4F8WBC2 141 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 F8WDY8 70 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 G3V3Q6 166 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 M0QXV9 152 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 BCL2L11O43521 198 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 SSNA1O43805 119 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 NUPR1O60356 82 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 IGLC6P0CF74 106 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 CFC1BP0CG36 223 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 PMCHP20382 165 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 CTAG1AP78358 180 aa1.38□□□□□ -2.19
RNU4-53P-201ENST00000410828 SPAG11BQ08648 103 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms