RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 TP73-AS1Q9UF72 201 aa9.85□□□□□ -0.83
LIMS1-205ENST00000410093 MYMXA0A1B0GTQ4 84 aa9.84□□□□□ -0.83
LIMS1-205ENST00000410093 SMAGPQ0VAQ4 97 aa9.84□□□□□ -0.83
LIMS1-205ENST00000410093 DAZ2Q13117 558 aaKnown RBP9.84□□□□□ -0.83
LIMS1-205ENST00000410093 RNASE8Q8TDE3 154 aaKnown RBP9.84□□□□□ -0.83
LIMS1-205ENST00000410093 C16orf74Q96GX8 76 aa9.84□□□□□ -0.83
LIMS1-205ENST00000410093 SPANXA1Q9NS26 97 aa9.84□□□□□ -0.83
LIMS1-205ENST00000410093 FBN3Q75N90 2809 aa9.83□□□□□ -0.84
LIMS1-205ENST00000410093 P0DMU3 169 aa9.83□□□□□ -0.84
LIMS1-205ENST00000410093 FAM231AP0DMU4 169 aa9.83□□□□□ -0.84
LIMS1-205ENST00000410093 FAM231CP0DMU5 169 aa9.83□□□□□ -0.84
LIMS1-205ENST00000410093 NACAE9PAV3 2078 aa9.83□□□□□ -0.84
LIMS1-205ENST00000410093 IGLV4-69A0A075B6H9 119 aa9.82□□□□□ -0.84
LIMS1-205ENST00000410093 TRAV8-6A0A0B4J262 113 aa9.82□□□□□ -0.84
LIMS1-205ENST00000410093 AZU1P20160 251 aa9.82□□□□□ -0.84
LIMS1-205ENST00000410093 RPL39P62891 51 aaKnown RBP9.82□□□□□ -0.84
LIMS1-205ENST00000410093 VCX2Q9H322 139 aa9.82□□□□□ -0.84
LIMS1-205ENST00000410093 TRAV4A0A0B4J268 109 aa9.82□□□□□ -0.84
LIMS1-205ENST00000410093 PF4P02776 101 aa9.82□□□□□ -0.84
LIMS1-205ENST00000410093 PTTG1IPP53801 180 aa9.82□□□□□ -0.84
LIMS1-205ENST00000410093 CEND1Q8N111 149 aa9.82□□□□□ -0.84
LIMS1-205ENST00000410093 OR4C5Q8NGB2 326 aa9.82□□□□□ -0.84
LIMS1-205ENST00000410093 PRADC1Q9BSG0 188 aa9.82□□□□□ -0.84
LIMS1-205ENST00000410093 C19orf73Q9NVV2 129 aa9.82□□□□□ -0.84
LIMS1-205ENST00000410093 C9orf118A6NHY6 69 aa9.81□□□□□ -0.84
LIMS1-205ENST00000410093 SMIM13P0DJ93 91 aa9.81□□□□□ -0.84
LIMS1-205ENST00000410093 COTL1Q14019 142 aa9.81□□□□□ -0.84
LIMS1-205ENST00000410093 VAMP3Q15836 100 aa9.81□□□□□ -0.84
LIMS1-205ENST00000410093 TIMM21Q9BVV7 248 aa9.81□□□□□ -0.84
LIMS1-205ENST00000410093 LINC00482Q8N8I6 264 aa9.8□□□□□ -0.84
LIMS1-205ENST00000410093 AMELXQ99217 191 aa9.8□□□□□ -0.84
LIMS1-205ENST00000410093 MRPL16Q9NX20 251 aaKnown RBP9.8□□□□□ -0.84
LIMS1-205ENST00000410093 IGLV4-3A0A075B6K6 122 aa9.79□□□□□ -0.84
LIMS1-205ENST00000410093 TCTAP57738 103 aa9.79□□□□□ -0.84
LIMS1-205ENST00000410093 DAZ4Q86SG3 579 aaKnown RBP9.79□□□□□ -0.84
LIMS1-205ENST00000410093 MAPKAPK5-AS1Q8N8E1 139 aa9.79□□□□□ -0.84
LIMS1-205ENST00000410093 OVOL2Q9BRP0 275 aa9.79□□□□□ -0.84
LIMS1-205ENST00000410093 DAZ3Q9NR90 486 aaKnown RBP9.79□□□□□ -0.84
LIMS1-205ENST00000410093 TRBV7-3A0A075B6L6 115 aa9.78□□□□□ -0.84
LIMS1-205ENST00000410093 TRGV1A0A0A0MS02 117 aa9.78□□□□□ -0.84
LIMS1-205ENST00000410093 GCSHP23434 173 aa9.78□□□□□ -0.84
LIMS1-205ENST00000410093 MRPS36P82909 103 aaKnown RBP9.78□□□□□ -0.84
LIMS1-205ENST00000410093 RPL36AP83881 106 aaKnown RBP9.78□□□□□ -0.84
LIMS1-205ENST00000410093 GTF2H5Q6ZYL4 71 aa9.78□□□□□ -0.84
LIMS1-205ENST00000410093 RPL36ALQ969Q0 106 aaKnown RBP9.78□□□□□ -0.84
LIMS1-205ENST00000410093 IGHV3-73A0A0B4J1V6 119 aa9.77□□□□□ -0.84
LIMS1-205ENST00000410093 TMEM238LA0A1B0GVL6 79 aa9.77□□□□□ -0.84
LIMS1-205ENST00000410093 A6NJY4 79 aa9.77□□□□□ -0.84
LIMS1-205ENST00000410093 ZNF815PA8K554 130 aa9.77□□□□□ -0.84
LIMS1-205ENST00000410093 RRN3P1Q2M238 152 aa9.77□□□□□ -0.84
LIMS1-205ENST00000410093 TMEM170BQ5T4T1 132 aa9.77□□□□□ -0.84
LIMS1-205ENST00000410093 C9orf66Q5T8R8 295 aa9.77□□□□□ -0.84
LIMS1-205ENST00000410093 PLEKHB2Q96CS7 222 aa9.77□□□□□ -0.84
LIMS1-205ENST00000410093 HIST1H4GQ99525 98 aa9.77□□□□□ -0.84
LIMS1-205ENST00000410093 IGHV3OR16-12A0A075B7B8 117 aa9.77□□□□□ -0.85
LIMS1-205ENST00000410093 GIG44P09565 113 aaPredicted RBP9.77□□□□□ -0.85
LIMS1-205ENST00000410093 HIST2H2BDQ6DRA6 164 aa9.77□□□□□ -0.85
LIMS1-205ENST00000410093 CSNK1G2-AS1Q8NCQ2 148 aa9.77□□□□□ -0.85
LIMS1-205ENST00000410093 WNK1Q9H4A3 2382 aa9.76□□□□□ -0.85
LIMS1-205ENST00000410093 K7EQD1 137 aa9.76□□□□□ -0.85
LIMS1-205ENST00000410093 LEPROTO15243 131 aa9.76□□□□□ -0.85
LIMS1-205ENST00000410093 SCGB1D4Q6XE38 83 aa9.76□□□□□ -0.85
LIMS1-205ENST00000410093 Q6ZSN1 163 aa9.76□□□□□ -0.85
LIMS1-205ENST00000410093 ZNRF2Q8NHG8 242 aa9.76□□□□□ -0.85
LIMS1-205ENST00000410093 CHCHD7Q9BUK0 85 aa9.76□□□□□ -0.85
LIMS1-205ENST00000410093 SPANXB1Q9NS25 103 aaPredicted RBP9.76□□□□□ -0.85
LIMS1-205ENST00000410093 CSDC2Q9Y534 153 aaKnown RBP9.76□□□□□ -0.85
LIMS1-205ENST00000410093 TINCRA0A1B0GVN0 87 aa9.75□□□□□ -0.85
LIMS1-205ENST00000410093 TMEM223A0PJW6 202 aa9.75□□□□□ -0.85
LIMS1-205ENST00000410093 SMIM9A6NGZ8 99 aa9.75□□□□□ -0.85
LIMS1-205ENST00000410093 CCL25O15444 150 aa9.75□□□□□ -0.85
LIMS1-205ENST00000410093 PRM2P04554 102 aa9.75□□□□□ -0.85
LIMS1-205ENST00000410093 LGALS3P17931 250 aaKnown RBP9.75□□□□□ -0.85
LIMS1-205ENST00000410093 TTTY13Q9BZ97 58 aa9.75□□□□□ -0.85
LIMS1-205ENST00000410093 UBE2D4Q9Y2X8 147 aa9.75□□□□□ -0.85
LIMS1-205ENST00000410093 TENM1Q9UKZ4 2725 aa9.75□□□□□ -0.85
LIMS1-205ENST00000410093 TRBV6-4A0A1B0GX49 114 aa9.74□□□□□ -0.85
LIMS1-205ENST00000410093 H7C423 109 aa9.74□□□□□ -0.85
LIMS1-205ENST00000410093 GTSF1LQ9H1H1 148 aa9.74□□□□□ -0.85
LIMS1-205ENST00000410093 A0A1B0GWB2 263 aa9.73□□□□□ -0.85
LIMS1-205ENST00000410093 J3QQQ9 107 aa9.73□□□□□ -0.85
LIMS1-205ENST00000410093 FXYD2P54710 66 aa9.73□□□□□ -0.85
LIMS1-205ENST00000410093 KRTAP10-3P60369 221 aa9.73□□□□□ -0.85
LIMS1-205ENST00000410093 AMMECR1LQ6DCA0 310 aa9.73□□□□□ -0.85
LIMS1-205ENST00000410093 GAGE10A6NGK3 116 aa9.72□□□□□ -0.85
LIMS1-205ENST00000410093 ZNF22P17026 224 aaPredicted RBP9.72□□□□□ -0.85
LIMS1-205ENST00000410093 RPL35AP18077 110 aaKnown RBP9.72□□□□□ -0.85
LIMS1-205ENST00000410093 Q6ZTI0 123 aa9.72□□□□□ -0.85
LIMS1-205ENST00000410093 Q6ZVH6 145 aa9.72□□□□□ -0.85
LIMS1-205ENST00000410093 OR5A1Q8NGJ0 315 aa9.72□□□□□ -0.85
LIMS1-205ENST00000410093 NOP10Q9NPE3 64 aaKnown RBP9.72□□□□□ -0.85
LIMS1-205ENST00000410093 A0A1W2PPM0 123 aa9.72□□□□□ -0.85
LIMS1-205ENST00000410093 PLAC8L1A1L4L8 177 aa9.72□□□□□ -0.85
LIMS1-205ENST00000410093 FABP2P12104 132 aa9.72□□□□□ -0.85
LIMS1-205ENST00000410093 TIRAPP58753 221 aa9.72□□□□□ -0.85
LIMS1-205ENST00000410093 UBE2D3P61077 147 aa9.72□□□□□ -0.85
LIMS1-205ENST00000410093 UBE2D2P62837 147 aa9.72□□□□□ -0.85
LIMS1-205ENST00000410093 DGAT2L7PQ6IED9 249 aa9.72□□□□□ -0.85
LIMS1-205ENST00000410093 KIR2DL5BQ8NHK3 375 aa9.72□□□□□ -0.85
LIMS1-205ENST00000410093 ZNF479Q96JC4 524 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms