RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TSC2P49815 1807 aa-0.51□□□□□ -2.49
PMS1-203ENST00000409593 PARP14Q460N5 1801 aa-0.51□□□□□ -2.49
PMS1-203ENST00000409593 MAP1BP46821 2468 aaKnown RBP-0.51□□□□□ -2.49
PMS1-203ENST00000409593 WDR7Q9Y4E6 1490 aa-0.51□□□□□ -2.49
PMS1-203ENST00000409593 LRRC37A3O60309 1634 aa-0.51□□□□□ -2.49
PMS1-203ENST00000409593 GNG14A0A1W2PPG7 69 aa-0.51□□□□□ -2.49
PMS1-203ENST00000409593 I3L2K1 104 aa-0.51□□□□□ -2.49
PMS1-203ENST00000409593 IGLC6P0CF74 106 aa-0.51□□□□□ -2.49
PMS1-203ENST00000409593 KLK9Q2XQG4 91 aa-0.51□□□□□ -2.49
PMS1-203ENST00000409593 CCDC153Q494R4 210 aa-0.51□□□□□ -2.49
PMS1-203ENST00000409593 VSTM2AQ8TAG5 236 aa-0.51□□□□□ -2.49
PMS1-203ENST00000409593 TP53AIP1Q9HCN2 124 aa-0.51□□□□□ -2.49
PMS1-203ENST00000409593 KDM5AP29375 1690 aaKnown RBP-0.52□□□□□ -2.49
PMS1-203ENST00000409593 ERCC6L2Q5T890 1561 aa-0.52□□□□□ -2.49
PMS1-203ENST00000409593 FXYD6-FXYD2A0A087WZ82 144 aa-0.52□□□□□ -2.49
PMS1-203ENST00000409593 APOC4-APOC2K7ER74 178 aa-0.52□□□□□ -2.49
PMS1-203ENST00000409593 DCDP81605 110 aaKnown RBP-0.52□□□□□ -2.49
PMS1-203ENST00000409593 Q5VV11 94 aa-0.52□□□□□ -2.49
PMS1-203ENST00000409593 SPAG11AQ6PDA7 123 aa-0.52□□□□□ -2.49
PMS1-203ENST00000409593 WNK1Q9H4A3 2382 aa-0.52□□□□□ -2.49
PMS1-203ENST00000409593 LRRC37A2A6NM11 1700 aa-0.52□□□□□ -2.49
PMS1-203ENST00000409593 MYH13Q9UKX3 1938 aa-0.52□□□□□ -2.49
PMS1-203ENST00000409593 TRBV6-1A0A0K0K1D8 114 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 NPFFO15130 113 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 UBE2G1P62253 170 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 HAMPP81172 84 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 HIST1H1AQ02539 215 aaPredicted RBP-0.53□□□□□ -2.49
PMS1-203ENST00000409593 SPANXN1Q5VSR9 72 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 SELENOSQ9BQE4 189 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 SCN3BQ9NY72 215 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 PRKDCP78527 4128 aaKnown RBP-0.53□□□□□ -2.49
PMS1-203ENST00000409593 ARHGEF10O15013 1369 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 CSPG4Q6UVK1 2322 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 PLCE1Q9P212 2302 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 SPTBN1Q01082 2364 aaKnown RBP-0.53□□□□□ -2.49
PMS1-203ENST00000409593 PRG4Q92954 1404 aaPredicted RBP-0.53□□□□□ -2.49
PMS1-203ENST00000409593 BIRC6Q9NR09 4857 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 WNK3Q9BYP7 1800 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 GVINP1Q7Z2Y8 2422 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 TEP1Q99973 2627 aaKnown RBP-0.53□□□□□ -2.49
PMS1-203ENST00000409593 BCE1O60756 84 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 LINC00694P0DN24 101 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 COX6B1P14854 86 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 SPRR1BP22528 89 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 B2MP61769 119 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 NCS1P62166 190 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 CFAP126Q5VTH2 177 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 TAC4Q86UU9 113 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 SDF2Q99470 211 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 PXDNQ92626 1479 aa-0.53□□□□□ -2.49
PMS1-203ENST00000409593 COL6A5A8TX70 2615 aa-0.54□□□□□ -2.5
PMS1-203ENST00000409593 ATRQ13535 2644 aa-0.54□□□□□ -2.5
PMS1-203ENST00000409593 OVOS2A0A0J9YW53 1432 aa-0.54□□□□□ -2.5
PMS1-203ENST00000409593 OVOS2Q6IE36 1432 aa-0.54□□□□□ -2.5
PMS1-203ENST00000409593 STARD9Q9P2P6 4700 aa-0.54□□□□□ -2.5
PMS1-203ENST00000409593 CDK5RAP2Q96SN8 1893 aa-0.54□□□□□ -2.5
PMS1-203ENST00000409593 DBIP07108 87 aaKnown RBP-0.54□□□□□ -2.5
PMS1-203ENST00000409593 TSPAN19P0C672 248 aa-0.54□□□□□ -2.5
PMS1-203ENST00000409593 PIGYQ3MUY2 71 aa-0.54□□□□□ -2.5
PMS1-203ENST00000409593 Q6ZUT4 128 aa-0.54□□□□□ -2.5
PMS1-203ENST00000409593 BAGE3Q86Y29 109 aa-0.54□□□□□ -2.5
PMS1-203ENST00000409593 RPRMQ9NS64 109 aa-0.54□□□□□ -2.5
PMS1-203ENST00000409593 CNOT1A5YKK6 2376 aaKnown RBP-0.54□□□□□ -2.5
PMS1-203ENST00000409593 PRDM2Q13029 1718 aa-0.55□□□□□ -2.5
PMS1-203ENST00000409593 S100A3P33764 101 aa-0.55□□□□□ -2.5
PMS1-203ENST00000409593 FXYD6Q9H0Q3 95 aa-0.55□□□□□ -2.5
PMS1-203ENST00000409593 NPVFQ9HCQ7 196 aa-0.55□□□□□ -2.5
PMS1-203ENST00000409593 MRPL40Q9NQ50 206 aaKnown RBP-0.55□□□□□ -2.5
PMS1-203ENST00000409593 TMEM2Q9UHN6 1383 aa-0.55□□□□□ -2.5
PMS1-203ENST00000409593 PCNX1Q96RV3 2341 aa-0.55□□□□□ -2.5
PMS1-203ENST00000409593 DAPK1P53355 1430 aa-0.55□□□□□ -2.5
PMS1-203ENST00000409593 CASKIN1Q8WXD9 1431 aa-0.55□□□□□ -2.5
PMS1-203ENST00000409593 GAPVD1Q14C86 1478 aa-0.55□□□□□ -2.5
PMS1-203ENST00000409593 PLXNB2O15031 1838 aa-0.55□□□□□ -2.5
PMS1-203ENST00000409593 DNHD1Q96M86 4753 aa-0.55□□□□□ -2.5
PMS1-203ENST00000409593 KIAA0556O60303 1618 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 FAM92AA1XBS5 289 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 SPINK4O60575 86 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 SMIM6P0DI80 62 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 CCL18P55774 89 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 SPTSSBQ8NFR3 76 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 SPRR2FQ96RM1 72 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 AGPAT4-IT1Q9H0P7 198 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 SAR1AQ9NR31 198 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 SPANXCQ9NY87 97 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 LINC00312Q9Y6C7 94 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 MXRA5Q9NR99 2828 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 USF3Q68DE3 2245 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 DISP2A7MBM2 1401 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 SVEP1Q4LDE5 3571 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 MRC1P22897 1456 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 SPTA1P02549 2419 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 FASNP49327 2511 aaKnown RBP-0.56□□□□□ -2.5
PMS1-203ENST00000409593 NWD2Q9ULI1 1742 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 DEFB135Q30KP9 77 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 MMGT1Q8N4V1 131 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 DEFB123Q8N688 67 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 SMIM3Q9BZL3 60 aa-0.56□□□□□ -2.5
PMS1-203ENST00000409593 PKD1P98161 4303 aa-0.57□□□□□ -2.5
PMS1-203ENST00000409593 MYH6P13533 1939 aa-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms