RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 TP73-AS1Q9UF72 201 aa9.01□□□□□ -0.97
CHRNA1-205ENST00000409542 COX11Q9Y6N1 276 aa9.01□□□□□ -0.97
CHRNA1-205ENST00000409542 A0A0J9YX75 114 aa9□□□□□ -0.97
CHRNA1-205ENST00000409542 SIVA1O15304 175 aa9□□□□□ -0.97
CHRNA1-205ENST00000409542 GNRH2O43555 120 aa9□□□□□ -0.97
CHRNA1-205ENST00000409542 NUDT3O95989 172 aa9□□□□□ -0.97
CHRNA1-205ENST00000409542 SMIM17P0DL12 118 aa9□□□□□ -0.97
CHRNA1-205ENST00000409542 ORMDL2Q53FV1 153 aa9□□□□□ -0.97
CHRNA1-205ENST00000409542 RASL10AQ92737 203 aa9□□□□□ -0.97
CHRNA1-205ENST00000409542 C18orf15Q96N68 181 aa9□□□□□ -0.97
CHRNA1-205ENST00000409542 DKK2Q9UBU2 259 aa9□□□□□ -0.97
CHRNA1-205ENST00000409542 HERC1Q15751 4861 aa9□□□□□ -0.97
CHRNA1-205ENST00000409542 APOBP04114 4563 aaKnown RBP8.99□□□□□ -0.97
CHRNA1-205ENST00000409542 DUSP14O95147 198 aaKnown RBP8.99□□□□□ -0.97
CHRNA1-205ENST00000409542 SUMO2P61956 95 aaKnown RBP8.99□□□□□ -0.97
CHRNA1-205ENST00000409542 RPL32P62910 135 aaKnown RBP8.99□□□□□ -0.97
CHRNA1-205ENST00000409542 FAM159AQ6UWV7 190 aa8.99□□□□□ -0.97
CHRNA1-205ENST00000409542 NACAE9PAV3 2078 aa8.98□□□□□ -0.97
CHRNA1-205ENST00000409542 PRSS1P07477 247 aa8.98□□□□□ -0.97
CHRNA1-205ENST00000409542 C14orf178Q8N769 122 aaPredicted RBP8.98□□□□□ -0.97
CHRNA1-205ENST00000409542 KIF25-AS1Q9Y6Z4 181 aa8.98□□□□□ -0.97
CHRNA1-205ENST00000409542 DPM2O94777 84 aa8.97□□□□□ -0.97
CHRNA1-205ENST00000409542 IGKCP01834 107 aa8.97□□□□□ -0.97
CHRNA1-205ENST00000409542 MGPP08493 103 aa8.97□□□□□ -0.97
CHRNA1-205ENST00000409542 NPSP0C0P6 89 aa8.97□□□□□ -0.97
CHRNA1-205ENST00000409542 HLA-DRB4P13762 266 aa8.97□□□□□ -0.97
CHRNA1-205ENST00000409542 C9orf85Q96MD7 179 aa8.97□□□□□ -0.97
CHRNA1-205ENST00000409542 XCL2Q9UBD3 114 aa8.97□□□□□ -0.97
CHRNA1-205ENST00000409542 HLA-DRB4X5D2U9 266 aa8.97□□□□□ -0.97
CHRNA1-205ENST00000409542 TRAV12-1A0A0B4J245 112 aa8.96□□□□□ -0.97
CHRNA1-205ENST00000409542 LINC00315P59091 139 aa8.96□□□□□ -0.97
CHRNA1-205ENST00000409542 SEC11AP67812 179 aa8.96□□□□□ -0.97
CHRNA1-205ENST00000409542 FOXI2Q6ZQN5 318 aa8.96□□□□□ -0.97
CHRNA1-205ENST00000409542 TOMM6Q96B49 74 aa8.96□□□□□ -0.97
CHRNA1-205ENST00000409542 A0A087WX48 190 aa8.96□□□□□ -0.98
CHRNA1-205ENST00000409542 TAX1BP3O14907 124 aa8.96□□□□□ -0.98
CHRNA1-205ENST00000409542 TMEM97Q5BJF2 176 aa8.96□□□□□ -0.98
CHRNA1-205ENST00000409542 UBE2DNLQ8IWF7 75 aa8.96□□□□□ -0.98
CHRNA1-205ENST00000409542 RPL39LQ96EH5 51 aaKnown RBP8.96□□□□□ -0.98
CHRNA1-205ENST00000409542 HHLA3Q9XRX5 114 aa8.96□□□□□ -0.98
CHRNA1-205ENST00000409542 DNAH5Q8TE73 4624 aa8.96□□□□□ -0.98
CHRNA1-205ENST00000409542 TRAV12-3A0A0B4J271 114 aa8.95□□□□□ -0.98
CHRNA1-205ENST00000409542 IGHV3-16A0A0C4DH30 117 aa8.95□□□□□ -0.98
CHRNA1-205ENST00000409542 LINC01549A6NIU2 74 aa8.95□□□□□ -0.98
CHRNA1-205ENST00000409542 A8MTW9 85 aa8.95□□□□□ -0.98
CHRNA1-205ENST00000409542 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.95□□□□□ -0.98
CHRNA1-205ENST00000409542 CDKN1BP46527 198 aa8.95□□□□□ -0.98
CHRNA1-205ENST00000409542 EMP1P54849 157 aa8.95□□□□□ -0.98
CHRNA1-205ENST00000409542 TNP2Q05952 138 aa8.95□□□□□ -0.98
CHRNA1-205ENST00000409542 HSD52Q0P140 79 aa8.95□□□□□ -0.98
CHRNA1-205ENST00000409542 MAPKAPK5-AS1Q8N8E1 139 aa8.95□□□□□ -0.98
CHRNA1-205ENST00000409542 IGHV1OR15-1A0A075B7D0 117 aa8.94□□□□□ -0.98
CHRNA1-205ENST00000409542 H3BMM0 161 aa8.94□□□□□ -0.98
CHRNA1-205ENST00000409542 PLNP26678 52 aa8.94□□□□□ -0.98
CHRNA1-205ENST00000409542 C1orf134Q5TEV5 83 aa8.94□□□□□ -0.98
CHRNA1-205ENST00000409542 AMTNQ6UX39 209 aa8.94□□□□□ -0.98
CHRNA1-205ENST00000409542 SYT8Q8NBV8 401 aa8.94□□□□□ -0.98
CHRNA1-205ENST00000409542 HIGD1BQ9P298 99 aa8.94□□□□□ -0.98
CHRNA1-205ENST00000409542 C16orf90A8MZG2 172 aa8.93□□□□□ -0.98
CHRNA1-205ENST00000409542 H7C1H1 209 aa8.93□□□□□ -0.98
CHRNA1-205ENST00000409542 NMUP48645 174 aa8.93□□□□□ -0.98
CHRNA1-205ENST00000409542 UBE2V1Q13404 147 aa8.93□□□□□ -0.98
CHRNA1-205ENST00000409542 SCGB3A1Q96QR1 104 aa8.93□□□□□ -0.98
CHRNA1-205ENST00000409542 MRPL35Q9NZE8 188 aaKnown RBP8.93□□□□□ -0.98
CHRNA1-205ENST00000409542 TRBV6-5A0A0K0K1A5 114 aa8.92□□□□□ -0.98
CHRNA1-205ENST00000409542 CDK2AP2O75956 126 aa8.92□□□□□ -0.98
CHRNA1-205ENST00000409542 SPART-AS1P0CW21 52 aa8.92□□□□□ -0.98
CHRNA1-205ENST00000409542 SUMO4Q6EEV6 95 aa8.92□□□□□ -0.98
CHRNA1-205ENST00000409542 PCP2Q8IVA1 136 aa8.92□□□□□ -0.98
CHRNA1-205ENST00000409542 TRGV11A0A075B6L2 103 aa8.91□□□□□ -0.98
CHRNA1-205ENST00000409542 IGHV3OR16-12A0A075B7B8 117 aa8.91□□□□□ -0.98
CHRNA1-205ENST00000409542 F8VRH5 84 aa8.91□□□□□ -0.98
CHRNA1-205ENST00000409542 HTN3P15516 51 aa8.91□□□□□ -0.98
CHRNA1-205ENST00000409542 POLR2KP53803 58 aaKnown RBP8.91□□□□□ -0.98
CHRNA1-205ENST00000409542 ZC2HC1BQ5TFG8 222 aa8.91□□□□□ -0.98
CHRNA1-205ENST00000409542 FAM222AQ5U5X8 452 aa8.91□□□□□ -0.98
CHRNA1-205ENST00000409542 C2orf66Q6UXQ4 117 aa8.91□□□□□ -0.98
CHRNA1-205ENST00000409542 Q6ZVH6 145 aa8.91□□□□□ -0.98
CHRNA1-205ENST00000409542 TRAV12-2A0A075B6T6 113 aa8.9□□□□□ -0.98
CHRNA1-205ENST00000409542 IGKV2D-26A0A0A0MRZ7 120 aa8.9□□□□□ -0.98
CHRNA1-205ENST00000409542 A6NDN8 102 aa8.9□□□□□ -0.98
CHRNA1-205ENST00000409542 IGKV3-20P01619 116 aa8.9□□□□□ -0.98
CHRNA1-205ENST00000409542 SPINK13Q1W4C9 94 aa8.9□□□□□ -0.98
CHRNA1-205ENST00000409542 ERASQ7Z444 233 aa8.9□□□□□ -0.98
CHRNA1-205ENST00000409542 NEXN-AS1Q8NBZ9 246 aa8.9□□□□□ -0.98
CHRNA1-205ENST00000409542 C1QTNF4Q9BXJ3 329 aa8.9□□□□□ -0.98
CHRNA1-205ENST00000409542 CBY3A6NI87 242 aa8.89□□□□□ -0.99
CHRNA1-205ENST00000409542 VCYO14598 125 aa8.89□□□□□ -0.99
CHRNA1-205ENST00000409542 PTTG1IPP53801 180 aa8.89□□□□□ -0.99
CHRNA1-205ENST00000409542 JPT2Q9H910 190 aa8.89□□□□□ -0.99
CHRNA1-205ENST00000409542 MDFICQ9P1T7 246 aa8.89□□□□□ -0.99
CHRNA1-205ENST00000409542 CHTOPQ9Y3Y2 248 aaKnown RBP8.89□□□□□ -0.99
CHRNA1-205ENST00000409542 H3BRM9 83 aa8.89□□□□□ -0.99
CHRNA1-205ENST00000409542 CCL25O15444 150 aa8.89□□□□□ -0.99
CHRNA1-205ENST00000409542 Q8N1X5 172 aa8.89□□□□□ -0.99
CHRNA1-205ENST00000409542 BAALCQ8WXS3 180 aa8.89□□□□□ -0.99
CHRNA1-205ENST00000409542 CYSLTR1Q9Y271 337 aa8.89□□□□□ -0.99
CHRNA1-205ENST00000409542 A0A087WWL8 130 aa8.88□□□□□ -0.99
CHRNA1-205ENST00000409542 TRBV27A0A0K0K1C4 114 aa8.88□□□□□ -0.99
CHRNA1-205ENST00000409542 SMIM9A6NGZ8 99 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms