RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 H3BMM0 161 aa11.15□□□□□ -0.62
SCAMP4-202ENST00000409472 TMEM86BQ8N661 226 aa11.15□□□□□ -0.62
SCAMP4-202ENST00000409472 MAP6D1Q9H9H5 199 aa11.15□□□□□ -0.62
SCAMP4-202ENST00000409472 CRYGDP07320 174 aa11.14□□□□□ -0.63
SCAMP4-202ENST00000409472 NDUFV3P56181 108 aaKnown RBP11.14□□□□□ -0.63
SCAMP4-202ENST00000409472 GAGE2BQ13066 116 aa11.14□□□□□ -0.63
SCAMP4-202ENST00000409472 GAGE2EQ4V326 116 aa11.14□□□□□ -0.63
SCAMP4-202ENST00000409472 ORMDL2Q53FV1 153 aa11.14□□□□□ -0.63
SCAMP4-202ENST00000409472 SCGB3A1Q96QR1 104 aa11.14□□□□□ -0.63
SCAMP4-202ENST00000409472 GAGE2DQ9UEU5 116 aa11.14□□□□□ -0.63
SCAMP4-202ENST00000409472 TRBV7-3A0A075B6L6 115 aa11.14□□□□□ -0.63
SCAMP4-202ENST00000409472 DYNLRB2Q8TF09 96 aa11.14□□□□□ -0.63
SCAMP4-202ENST00000409472 YAE1D1Q9NRH1 226 aa11.14□□□□□ -0.63
SCAMP4-202ENST00000409472 PEMTQ9UBM1 199 aa11.14□□□□□ -0.63
SCAMP4-202ENST00000409472 A0A087WX48 190 aa11.13□□□□□ -0.63
SCAMP4-202ENST00000409472 ZNF56Q15929 161 aa11.13□□□□□ -0.63
SCAMP4-202ENST00000409472 DEFB114Q30KQ6 69 aa11.13□□□□□ -0.63
SCAMP4-202ENST00000409472 SNCGO76070 127 aa11.13□□□□□ -0.63
SCAMP4-202ENST00000409472 PSMB2P49721 201 aa11.13□□□□□ -0.63
SCAMP4-202ENST00000409472 POLR2KP53803 58 aaKnown RBP11.13□□□□□ -0.63
SCAMP4-202ENST00000409472 RPL39P62891 51 aaKnown RBP11.13□□□□□ -0.63
SCAMP4-202ENST00000409472 ZNF876PQ49A33 203 aa11.13□□□□□ -0.63
SCAMP4-202ENST00000409472 TTC32Q5I0X7 151 aa11.13□□□□□ -0.63
SCAMP4-202ENST00000409472 CARD19Q96LW7 228 aa11.13□□□□□ -0.63
SCAMP4-202ENST00000409472 SMR3AQ99954 134 aa11.12□□□□□ -0.63
SCAMP4-202ENST00000409472 NACAE9PAV3 2078 aa11.12□□□□□ -0.63
SCAMP4-202ENST00000409472 SDHAF1A6NFY7 115 aa11.12□□□□□ -0.63
SCAMP4-202ENST00000409472 A8MWV9 139 aa11.12□□□□□ -0.63
SCAMP4-202ENST00000409472 IFITM1P13164 125 aa11.12□□□□□ -0.63
SCAMP4-202ENST00000409472 MAPKAPK5-AS1Q8N8E1 139 aa11.12□□□□□ -0.63
SCAMP4-202ENST00000409472 BAALCQ8WXS3 180 aa11.12□□□□□ -0.63
SCAMP4-202ENST00000409472 CITED2Q99967 270 aaPredicted RBP11.12□□□□□ -0.63
SCAMP4-202ENST00000409472 ZNF256Q9Y2P7 627 aaPredicted RBP11.12□□□□□ -0.63
SCAMP4-202ENST00000409472 IGHV3-73A0A0B4J1V6 119 aa11.11□□□□□ -0.63
SCAMP4-202ENST00000409472 A8MTW9 85 aa11.11□□□□□ -0.63
SCAMP4-202ENST00000409472 M0QY20 66 aa11.11□□□□□ -0.63
SCAMP4-202ENST00000409472 TSHBP01222 138 aa11.11□□□□□ -0.63
SCAMP4-202ENST00000409472 NEXN-AS1Q8NBZ9 246 aa11.11□□□□□ -0.63
SCAMP4-202ENST00000409472 OTOGQ6ZRI0 2925 aa11.11□□□□□ -0.63
SCAMP4-202ENST00000409472 ZFP2Q6ZN57 461 aa11.11□□□□□ -0.63
SCAMP4-202ENST00000409472 TP53TG1Q9Y2A0 90 aa11.11□□□□□ -0.63
SCAMP4-202ENST00000409472 NOTCH2Q04721 2471 aa11.1□□□□□ -0.63
SCAMP4-202ENST00000409472 TRBV20-1A0A075B6N2 111 aa11.1□□□□□ -0.63
SCAMP4-202ENST00000409472 LOC107984156A0A0G2JMH3 177 aa11.1□□□□□ -0.63
SCAMP4-202ENST00000409472 CCDC179H3BU77 68 aa11.1□□□□□ -0.63
SCAMP4-202ENST00000409472 PROK1P58294 105 aa11.1□□□□□ -0.63
SCAMP4-202ENST00000409472 ODF3L2Q3SX64 289 aa11.1□□□□□ -0.63
SCAMP4-202ENST00000409472 ARL17AQ8IVW1 177 aa11.1□□□□□ -0.63
SCAMP4-202ENST00000409472 F8VRH5 84 aa11.1□□□□□ -0.63
SCAMP4-202ENST00000409472 PLNP26678 52 aa11.1□□□□□ -0.63
SCAMP4-202ENST00000409472 Q6Q795 121 aa11.1□□□□□ -0.63
SCAMP4-202ENST00000409472 MYMXA0A1B0GTQ4 84 aa11.09□□□□□ -0.63
SCAMP4-202ENST00000409472 P0DMU3 169 aa11.09□□□□□ -0.63
SCAMP4-202ENST00000409472 FAM231AP0DMU4 169 aa11.09□□□□□ -0.63
SCAMP4-202ENST00000409472 FAM231CP0DMU5 169 aa11.09□□□□□ -0.63
SCAMP4-202ENST00000409472 EMP1P54849 157 aa11.09□□□□□ -0.63
SCAMP4-202ENST00000409472 LINC01006Q8NI28 216 aa11.09□□□□□ -0.63
SCAMP4-202ENST00000409472 PTH2Q96A98 100 aa11.09□□□□□ -0.63
SCAMP4-202ENST00000409472 Q9UF83 564 aa11.09□□□□□ -0.63
SCAMP4-202ENST00000409472 SBSPONQ8IVN8 264 aa11.09□□□□□ -0.63
SCAMP4-202ENST00000409472 TRGV11A0A075B6L2 103 aa11.08□□□□□ -0.64
SCAMP4-202ENST00000409472 TRAV12-1A0A0B4J245 112 aa11.08□□□□□ -0.64
SCAMP4-202ENST00000409472 CCL24O00175 119 aa11.08□□□□□ -0.64
SCAMP4-202ENST00000409472 PPP1R17O96001 155 aa11.08□□□□□ -0.64
SCAMP4-202ENST00000409472 UBE2D3P61077 147 aa11.08□□□□□ -0.64
SCAMP4-202ENST00000409472 UBE2D2P62837 147 aa11.08□□□□□ -0.64
SCAMP4-202ENST00000409472 FLNBO75369 2602 aaKnown RBP11.08□□□□□ -0.64
SCAMP4-202ENST00000409472 NOTCH3Q9UM47 2321 aa11.08□□□□□ -0.64
SCAMP4-202ENST00000409472 H7C1H1 209 aa11.08□□□□□ -0.64
SCAMP4-202ENST00000409472 TRAV2A0A0B4J234 112 aa11.07□□□□□ -0.64
SCAMP4-202ENST00000409472 TRBV27A0A0K0K1C4 114 aa11.07□□□□□ -0.64
SCAMP4-202ENST00000409472 LINC01549A6NIU2 74 aa11.07□□□□□ -0.64
SCAMP4-202ENST00000409472 IGIPA6NJ69 53 aa11.06□□□□□ -0.64
SCAMP4-202ENST00000409472 TRBV6-5A0A0K0K1A5 114 aa11.06□□□□□ -0.64
SCAMP4-202ENST00000409472 VCYO14598 125 aa11.06□□□□□ -0.64
SCAMP4-202ENST00000409472 ANKRD29Q8N6D5 301 aa11.06□□□□□ -0.64
SCAMP4-202ENST00000409472 KIR2DL4Q99706 377 aa11.06□□□□□ -0.64
SCAMP4-202ENST00000409472 OPRPNQ99935 248 aaPredicted RBP11.06□□□□□ -0.64
SCAMP4-202ENST00000409472 RNASE1P07998 156 aaKnown RBP11.05□□□□□ -0.64
SCAMP4-202ENST00000409472 Q6ZSN1 163 aa11.05□□□□□ -0.64
SCAMP4-202ENST00000409472 TMEM126AQ9H061 195 aa11.05□□□□□ -0.64
SCAMP4-202ENST00000409472 XCL2Q9UBD3 114 aa11.05□□□□□ -0.64
SCAMP4-202ENST00000409472 VWFP04275 2813 aa11.05□□□□□ -0.64
SCAMP4-202ENST00000409472 HIVEP2P31629 2446 aa11.04□□□□□ -0.64
SCAMP4-202ENST00000409472 IGLV4-69A0A075B6H9 119 aa11.04□□□□□ -0.64
SCAMP4-202ENST00000409472 M0QXV9 152 aa11.04□□□□□ -0.64
SCAMP4-202ENST00000409472 SCGB1C2P0DMR2 95 aa11.04□□□□□ -0.64
SCAMP4-202ENST00000409472 UBE2D1P51668 147 aa11.04□□□□□ -0.64
SCAMP4-202ENST00000409472 C11orf72Q8NBR9 251 aa11.04□□□□□ -0.64
SCAMP4-202ENST00000409472 WFDC10AQ9H1F0 79 aa11.04□□□□□ -0.64
SCAMP4-202ENST00000409472 LINC01587Q99440 93 aa11.03□□□□□ -0.64
SCAMP4-202ENST00000409472 C11orf86A6NJI1 115 aa11.03□□□□□ -0.64
SCAMP4-202ENST00000409472 TRPT1Q86TN4 253 aaKnown RBP11.03□□□□□ -0.64
SCAMP4-202ENST00000409472 IGHV3OR16-12A0A075B7B8 117 aa11.02□□□□□ -0.65
SCAMP4-202ENST00000409472 TRAV4A0A0B4J268 109 aa11.02□□□□□ -0.65
SCAMP4-202ENST00000409472 TCL1BO95988 128 aa11.02□□□□□ -0.65
SCAMP4-202ENST00000409472 INSP01308 110 aa11.01□□□□□ -0.65
SCAMP4-202ENST00000409472 MEIG1Q5JSS6 88 aa11.01□□□□□ -0.65
SCAMP4-202ENST00000409472 ADARB2-AS1A8MUL3 147 aa11.01□□□□□ -0.65
SCAMP4-202ENST00000409472 M0R2P5 195 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms