RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 SCXQ7RTU7 201 aa8.42□□□□□ -1.06
SNORD88B-201ENST00000408454 RNF185Q96GF1 192 aa8.42□□□□□ -1.06
SNORD88B-201ENST00000408454 EIF5A2Q9GZV4 153 aaKnown RBP8.42□□□□□ -1.06
SNORD88B-201ENST00000408454 GFRA4Q9GZZ7 299 aa8.42□□□□□ -1.06
SNORD88B-201ENST00000408454 NTM-AS1Q6ZSK4 140 aa8.41□□□□□ -1.06
SNORD88B-201ENST00000408454 C9orf163Q8N9P6 203 aa8.41□□□□□ -1.06
SNORD88B-201ENST00000408454 IGHV3-64A0A075B6Q5 118 aa8.4□□□□□ -1.06
SNORD88B-201ENST00000408454 hDV102S1A0JD36 115 aa8.4□□□□□ -1.06
SNORD88B-201ENST00000408454 CNBPP62633 177 aaKnown RBP8.4□□□□□ -1.06
SNORD88B-201ENST00000408454 SMIM7Q9BQ49 75 aa8.4□□□□□ -1.06
SNORD88B-201ENST00000408454 FAM30AQ9NZY2 134 aa8.4□□□□□ -1.06
SNORD88B-201ENST00000408454 LRP1BQ9NZR2 4599 aa8.39□□□□□ -1.07
SNORD88B-201ENST00000408454 TRBV20OR9-2A0A075B6H5 130 aa8.39□□□□□ -1.07
SNORD88B-201ENST00000408454 I3L3M4 83 aa8.39□□□□□ -1.07
SNORD88B-201ENST00000408454 TCAPO15273 167 aa8.39□□□□□ -1.07
SNORD88B-201ENST00000408454 FAM74A3Q4VXF1 159 aa8.39□□□□□ -1.07
SNORD88B-201ENST00000408454 OCC1Q8TAD7 63 aa8.39□□□□□ -1.07
SNORD88B-201ENST00000408454 DPH3Q96FX2 82 aa8.39□□□□□ -1.07
SNORD88B-201ENST00000408454 HSPG2P98160 4391 aa8.38□□□□□ -1.07
SNORD88B-201ENST00000408454 A0A1B0GUT8 65 aa8.38□□□□□ -1.07
SNORD88B-201ENST00000408454 OXTP01178 125 aa8.38□□□□□ -1.07
SNORD88B-201ENST00000408454 PMCHP20382 165 aa8.38□□□□□ -1.07
SNORD88B-201ENST00000408454 CEBPGP53567 150 aa8.38□□□□□ -1.07
SNORD88B-201ENST00000408454 RNASEKQ6P5S7 137 aaKnown RBP8.38□□□□□ -1.07
SNORD88B-201ENST00000408454 CLPSL2Q6UWE3 100 aa8.38□□□□□ -1.07
SNORD88B-201ENST00000408454 CIRBP-AS1Q8TBR5 109 aa8.38□□□□□ -1.07
SNORD88B-201ENST00000408454 TMEM18Q96B42 140 aa8.38□□□□□ -1.07
SNORD88B-201ENST00000408454 MRAP2Q96G30 205 aa8.38□□□□□ -1.07
SNORD88B-201ENST00000408454 RNASE7Q9H1E1 156 aaKnown RBP8.38□□□□□ -1.07
SNORD88B-201ENST00000408454 LINC00474Q9P2X8 69 aa8.38□□□□□ -1.07
SNORD88B-201ENST00000408454 ZNF727A8MUV8 499 aa8.37□□□□□ -1.07
SNORD88B-201ENST00000408454 CCL25O15444 150 aa8.37□□□□□ -1.07
SNORD88B-201ENST00000408454 S100A8P05109 93 aa8.37□□□□□ -1.07
SNORD88B-201ENST00000408454 FOXA3P55318 350 aaPredicted RBP8.37□□□□□ -1.07
SNORD88B-201ENST00000408454 RIGQ13278 110 aa8.37□□□□□ -1.07
SNORD88B-201ENST00000408454 ALKAL2Q6UX46 152 aa8.37□□□□□ -1.07
SNORD88B-201ENST00000408454 Q6ZNX1 250 aa8.37□□□□□ -1.07
SNORD88B-201ENST00000408454 ST20Q9HBF5 79 aa8.37□□□□□ -1.07
SNORD88B-201ENST00000408454 DNAH5Q8TE73 4624 aa8.36□□□□□ -1.07
SNORD88B-201ENST00000408454 TRBV6-5A0A0K0K1A5 114 aa8.36□□□□□ -1.07
SNORD88B-201ENST00000408454 A0A1B0GW15 77 aa8.36□□□□□ -1.07
SNORD88B-201ENST00000408454 SDHAF1A6NFY7 115 aa8.36□□□□□ -1.07
SNORD88B-201ENST00000408454 KRTAP29-1A8MX34 341 aaPredicted RBP8.36□□□□□ -1.07
SNORD88B-201ENST00000408454 PPP1R2P9O14990 202 aa8.36□□□□□ -1.07
SNORD88B-201ENST00000408454 PRSS1P07477 247 aa8.36□□□□□ -1.07
SNORD88B-201ENST00000408454 RPL37AP61513 92 aaKnown RBP8.36□□□□□ -1.07
SNORD88B-201ENST00000408454 HAMPP81172 84 aa8.36□□□□□ -1.07
SNORD88B-201ENST00000408454 SERTAD4-AS1Q5TG53 156 aa8.36□□□□□ -1.07
SNORD88B-201ENST00000408454 C20orf203Q8NBC4 194 aa8.36□□□□□ -1.07
SNORD88B-201ENST00000408454 OR5A1Q8NGJ0 315 aa8.36□□□□□ -1.07
SNORD88B-201ENST00000408454 LYPD6BQ8NI32 183 aa8.36□□□□□ -1.07
SNORD88B-201ENST00000408454 C7orf33Q8WU49 177 aa8.36□□□□□ -1.07
SNORD88B-201ENST00000408454 TSKUQ8WUA8 353 aa8.36□□□□□ -1.07
SNORD88B-201ENST00000408454 SMDT1Q9H4I9 107 aa8.36□□□□□ -1.07
SNORD88B-201ENST00000408454 OSTCQ9NRP0 149 aa8.36□□□□□ -1.07
SNORD88B-201ENST00000408454 IGLV10-54A0A075B6I4 117 aa8.35□□□□□ -1.07
SNORD88B-201ENST00000408454 SS18Q15532 418 aa8.35□□□□□ -1.07
SNORD88B-201ENST00000408454 GATD1Q8NB37 220 aa8.35□□□□□ -1.07
SNORD88B-201ENST00000408454 KIR2DL4Q99706 377 aa8.35□□□□□ -1.07
SNORD88B-201ENST00000408454 TMEM191AQ9H0A3 160 aa8.35□□□□□ -1.07
SNORD88B-201ENST00000408454 DMBT1Q9UGM3 2413 aaPredicted RBP8.34□□□□□ -1.07
SNORD88B-201ENST00000408454 FCER1GP30273 86 aa8.34□□□□□ -1.07
SNORD88B-201ENST00000408454 HIGD1CA8MV81 97 aa8.33□□□□□ -1.08
SNORD88B-201ENST00000408454 K7EN84 100 aa8.33□□□□□ -1.08
SNORD88B-201ENST00000408454 FGF6P10767 208 aa8.33□□□□□ -1.08
SNORD88B-201ENST00000408454 RPS10P46783 165 aaKnown RBP8.33□□□□□ -1.08
SNORD88B-201ENST00000408454 LINC01620Q4KN68 170 aa8.33□□□□□ -1.08
SNORD88B-201ENST00000408454 ISOC2Q96AB3 205 aa8.33□□□□□ -1.08
SNORD88B-201ENST00000408454 NAT8BQ9UHF3 227 aa8.33□□□□□ -1.08
SNORD88B-201ENST00000408454 IGLV4-60A0A075B6I1 120 aa8.32□□□□□ -1.08
SNORD88B-201ENST00000408454 C7orf77A4D0Y5 90 aa8.32□□□□□ -1.08
SNORD88B-201ENST00000408454 VCYO14598 125 aa8.32□□□□□ -1.08
SNORD88B-201ENST00000408454 PEA15Q15121 130 aa8.32□□□□□ -1.08
SNORD88B-201ENST00000408454 TMEM241Q24JQ0 296 aa8.32□□□□□ -1.08
SNORD88B-201ENST00000408454 LINC01551Q86U37 167 aa8.32□□□□□ -1.08
SNORD88B-201ENST00000408454 GTSF1Q8WW33 167 aa8.32□□□□□ -1.08
SNORD88B-201ENST00000408454 IGHV1-58A0A0C4DH39 117 aa8.31□□□□□ -1.08
SNORD88B-201ENST00000408454 LINC00862A6NCI5 91 aa8.31□□□□□ -1.08
SNORD88B-201ENST00000408454 GAGE12HA6NDE8 117 aa8.31□□□□□ -1.08
SNORD88B-201ENST00000408454 F8W036 122 aa8.31□□□□□ -1.08
SNORD88B-201ENST00000408454 CHCHD10Q8WYQ3 142 aaPredicted RBP8.31□□□□□ -1.08
SNORD88B-201ENST00000408454 TRAV26-2A0A0B4J265 109 aa8.3□□□□□ -1.08
SNORD88B-201ENST00000408454 IGKV3OR2-268A0A0C4DH90 116 aa8.3□□□□□ -1.08
SNORD88B-201ENST00000408454 TRBV27A0A0K0K1C4 114 aa8.3□□□□□ -1.08
SNORD88B-201ENST00000408454 ZNF561-AS1K7EIQ3 104 aa8.3□□□□□ -1.08
SNORD88B-201ENST00000408454 KRTAP26-1Q6PEX3 210 aa8.3□□□□□ -1.08
SNORD88B-201ENST00000408454 SDIM1Q6ZPB5 146 aa8.3□□□□□ -1.08
SNORD88B-201ENST00000408454 MRPL52Q86TS9 123 aaKnown RBP8.3□□□□□ -1.08
SNORD88B-201ENST00000408454 APOBP04114 4563 aaKnown RBP8.3□□□□□ -1.08
SNORD88B-201ENST00000408454 ABCA13Q86UQ4 5058 aa8.3□□□□□ -1.08
SNORD88B-201ENST00000408454 hCG_2014768A0A024R1R8 64 aa8.29□□□□□ -1.08
SNORD88B-201ENST00000408454 GVQW2A0A096LPI5 108 aaPredicted RBP8.29□□□□□ -1.08
SNORD88B-201ENST00000408454 C1orf196B1AJZ1 125 aa8.29□□□□□ -1.08
SNORD88B-201ENST00000408454 APOMO95445 188 aa8.29□□□□□ -1.08
SNORD88B-201ENST00000408454 NAT8Q9UHE5 227 aa8.29□□□□□ -1.08
SNORD88B-201ENST00000408454 CSDC2Q9Y534 153 aaKnown RBP8.29□□□□□ -1.08
SNORD88B-201ENST00000408454 MALP21145 153 aa8.28□□□□□ -1.08
SNORD88B-201ENST00000408454 CIRBPQ14011 172 aaKnown RBP8.28□□□□□ -1.08
SNORD88B-201ENST00000408454 Q6ZRU5 148 aa8.28□□□□□ -1.08
SNORD88B-201ENST00000408454 RPL39LQ96EH5 51 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms