RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 NDUFS6O75380 124 aaKnown RBP13.69□□□□□ -0.22
RHBDD3-202ENST00000406335 FOXA3P55318 350 aaPredicted RBP13.69□□□□□ -0.22
RHBDD3-202ENST00000406335 Q0VG73 95 aa13.69□□□□□ -0.22
RHBDD3-202ENST00000406335 PGLYRP4Q96LB8 373 aa13.69□□□□□ -0.22
RHBDD3-202ENST00000406335 NIT2Q9NQR4 276 aa13.69□□□□□ -0.22
RHBDD3-202ENST00000406335 IGHV1-24A0A0C4DH33 117 aa13.68□□□□□ -0.22
RHBDD3-202ENST00000406335 ZNF727A8MUV8 499 aa13.68□□□□□ -0.22
RHBDD3-202ENST00000406335 A8MWL6 223 aa13.68□□□□□ -0.22
RHBDD3-202ENST00000406335 IQCJQ1A5X6 159 aa13.68□□□□□ -0.22
RHBDD3-202ENST00000406335 LINC01551Q86U37 167 aa13.68□□□□□ -0.22
RHBDD3-202ENST00000406335 GATD1Q8NB37 220 aa13.68□□□□□ -0.22
RHBDD3-202ENST00000406335 C1orf43Q9BWL3 253 aa13.68□□□□□ -0.22
RHBDD3-202ENST00000406335 TRAV26-2A0A0B4J265 109 aa13.67□□□□□ -0.22
RHBDD3-202ENST00000406335 CRPP02741 224 aa13.67□□□□□ -0.22
RHBDD3-202ENST00000406335 PKIAP61925 76 aa13.67□□□□□ -0.22
RHBDD3-202ENST00000406335 RBX1P62877 108 aa13.67□□□□□ -0.22
RHBDD3-202ENST00000406335 CLPSL2Q6UWE3 100 aa13.66□□□□□ -0.22
RHBDD3-202ENST00000406335 CT83Q5H943 113 aa13.65□□□□□ -0.22
RHBDD3-202ENST00000406335 FAT3Q8TDW7 4589 aa13.63□□□□□ -0.23
RHBDD3-202ENST00000406335 C9JQL5 133 aa13.63□□□□□ -0.23
RHBDD3-202ENST00000406335 TEX261Q6UWH6 196 aa13.63□□□□□ -0.23
RHBDD3-202ENST00000406335 LINC00269Q8N2A0 174 aa13.63□□□□□ -0.23
RHBDD3-202ENST00000406335 RPL39LQ96EH5 51 aaKnown RBP13.63□□□□□ -0.23
RHBDD3-202ENST00000406335 TMEM243Q9BU79 118 aa13.63□□□□□ -0.23
RHBDD3-202ENST00000406335 OSTCQ9NRP0 149 aa13.63□□□□□ -0.23
RHBDD3-202ENST00000406335 HLA-DQA1P01909 254 aa13.62□□□□□ -0.23
RHBDD3-202ENST00000406335 SRSF3P84103 164 aaKnown RBP13.62□□□□□ -0.23
RHBDD3-202ENST00000406335 SMIM15Q7Z3B0 74 aa13.62□□□□□ -0.23
RHBDD3-202ENST00000406335 PRR34Q9NV39 138 aa13.62□□□□□ -0.23
RHBDD3-202ENST00000406335 HIGD1CA8MV81 97 aa13.61□□□□□ -0.23
RHBDD3-202ENST00000406335 HNRNPA3P51991 378 aaKnown RBP13.61□□□□□ -0.23
RHBDD3-202ENST00000406335 MIAQ16674 131 aa13.61□□□□□ -0.23
RHBDD3-202ENST00000406335 C20orf203Q8NBC4 194 aa13.61□□□□□ -0.23
RHBDD3-202ENST00000406335 TSKUQ8WUA8 353 aa13.61□□□□□ -0.23
RHBDD3-202ENST00000406335 IGLV4-60A0A075B6I1 120 aa13.6□□□□□ -0.23
RHBDD3-202ENST00000406335 COTL1Q14019 142 aa13.6□□□□□ -0.23
RHBDD3-202ENST00000406335 DPH3Q96FX2 82 aa13.6□□□□□ -0.23
RHBDD3-202ENST00000406335 V9GYV3 84 aa13.6□□□□□ -0.23
RHBDD3-202ENST00000406335 USP17L23D6RBM5 183 aa13.59□□□□□ -0.23
RHBDD3-202ENST00000406335 AMTP48728 403 aa13.59□□□□□ -0.23
RHBDD3-202ENST00000406335 RPL23P62829 140 aaKnown RBP13.59□□□□□ -0.23
RHBDD3-202ENST00000406335 TMEM241Q24JQ0 296 aa13.59□□□□□ -0.23
RHBDD3-202ENST00000406335 KRTAP26-1Q6PEX3 210 aa13.59□□□□□ -0.23
RHBDD3-202ENST00000406335 ISOC2Q96AB3 205 aa13.59□□□□□ -0.23
RHBDD3-202ENST00000406335 GFRA4Q9GZZ7 299 aa13.59□□□□□ -0.23
RHBDD3-202ENST00000406335 A0A1B0GUT8 65 aa13.58□□□□□ -0.24
RHBDD3-202ENST00000406335 GAS8-AS1O95177 125 aa13.58□□□□□ -0.24
RHBDD3-202ENST00000406335 BORCS7Q96B45 105 aa13.58□□□□□ -0.24
RHBDD3-202ENST00000406335 A0A1B0GUV1 79 aa13.57□□□□□ -0.24
RHBDD3-202ENST00000406335 REG3AQ06141 175 aa13.57□□□□□ -0.24
RHBDD3-202ENST00000406335 FAM74A3Q4VXF1 159 aa13.57□□□□□ -0.24
RHBDD3-202ENST00000406335 DGAT2L7PQ6IED9 249 aa13.57□□□□□ -0.24
RHBDD3-202ENST00000406335 IGLV10-54A0A075B6I4 117 aa13.56□□□□□ -0.24
RHBDD3-202ENST00000406335 FAM231BA6NCW3 169 aa13.56□□□□□ -0.24
RHBDD3-202ENST00000406335 UBE2L6O14933 153 aa13.56□□□□□ -0.24
RHBDD3-202ENST00000406335 ADIRFQ15847 76 aa13.56□□□□□ -0.24
RHBDD3-202ENST00000406335 SDHAF1A6NFY7 115 aa13.55□□□□□ -0.24
RHBDD3-202ENST00000406335 PRSS1P07477 247 aa13.55□□□□□ -0.24
RHBDD3-202ENST00000406335 PEA15Q15121 130 aa13.55□□□□□ -0.24
RHBDD3-202ENST00000406335 RNF185Q96GF1 192 aa13.55□□□□□ -0.24
RHBDD3-202ENST00000406335 Q6ZRU5 148 aa13.54□□□□□ -0.24
RHBDD3-202ENST00000406335 NUP35Q8NFH5 326 aa13.54□□□□□ -0.24
RHBDD3-202ENST00000406335 TMEM191AQ9H0A3 160 aa13.54□□□□□ -0.24
RHBDD3-202ENST00000406335 NAT8Q9UHE5 227 aa13.54□□□□□ -0.24
RHBDD3-202ENST00000406335 C9orf163Q8N9P6 203 aa13.53□□□□□ -0.24
RHBDD3-202ENST00000406335 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.53□□□□□ -0.24
RHBDD3-202ENST00000406335 RAB4AP20338 218 aa13.52□□□□□ -0.25
RHBDD3-202ENST00000406335 AMN1Q8IY45 258 aa13.52□□□□□ -0.25
RHBDD3-202ENST00000406335 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.51□□□□□ -0.25
RHBDD3-202ENST00000406335 TRBV6-5A0A0K0K1A5 114 aa13.51□□□□□ -0.25
RHBDD3-202ENST00000406335 IGKV2-29A2NJV5 120 aaPredicted RBP13.51□□□□□ -0.25
RHBDD3-202ENST00000406335 NCR2O95944 276 aa13.51□□□□□ -0.25
RHBDD3-202ENST00000406335 RPS10P46783 165 aaKnown RBP13.51□□□□□ -0.25
RHBDD3-202ENST00000406335 APCSP02743 223 aa13.5□□□□□ -0.25
RHBDD3-202ENST00000406335 PMCHP20382 165 aa13.5□□□□□ -0.25
RHBDD3-202ENST00000406335 RIGQ13278 110 aa13.5□□□□□ -0.25
RHBDD3-202ENST00000406335 SMDT1Q9H4I9 107 aa13.5□□□□□ -0.25
RHBDD3-202ENST00000406335 TRAV8-4A0A0B4J246 113 aa13.49□□□□□ -0.25
RHBDD3-202ENST00000406335 SMKR1H3BMG3 65 aa13.49□□□□□ -0.25
RHBDD3-202ENST00000406335 MT1HL1P0DM35 61 aa13.49□□□□□ -0.25
RHBDD3-202ENST00000406335 ST20Q9HBF5 79 aa13.49□□□□□ -0.25
RHBDD3-202ENST00000406335 NAT8BQ9UHF3 227 aa13.49□□□□□ -0.25
RHBDD3-202ENST00000406335 IGKV3OR2-268A0A0C4DH90 116 aa13.48□□□□□ -0.25
RHBDD3-202ENST00000406335 I3L3M4 83 aa13.48□□□□□ -0.25
RHBDD3-202ENST00000406335 MRAP2Q96G30 205 aa13.48□□□□□ -0.25
RHBDD3-202ENST00000406335 SMIM27A0A1W2PRY6 76 aa13.47□□□□□ -0.25
RHBDD3-202ENST00000406335 TSHBP01222 138 aa13.47□□□□□ -0.25
RHBDD3-202ENST00000406335 POLR2KP53803 58 aaKnown RBP13.47□□□□□ -0.25
RHBDD3-202ENST00000406335 AMMECR1LQ6DCA0 310 aa13.47□□□□□ -0.25
RHBDD3-202ENST00000406335 RNASEKQ6P5S7 137 aaKnown RBP13.47□□□□□ -0.25
RHBDD3-202ENST00000406335 SDIM1Q6ZPB5 146 aa13.47□□□□□ -0.25
RHBDD3-202ENST00000406335 TMEM242Q9NWH2 141 aa13.47□□□□□ -0.25
RHBDD3-202ENST00000406335 PANO1I0J062 215 aa13.46□□□□□ -0.25
RHBDD3-202ENST00000406335 FGF6P10767 208 aa13.46□□□□□ -0.25
RHBDD3-202ENST00000406335 CLRN3Q8NCR9 226 aa13.46□□□□□ -0.25
RHBDD3-202ENST00000406335 PKHD1L1Q86WI1 4243 aa13.45□□□□□ -0.26
RHBDD3-202ENST00000406335 hDV102S1A0JD36 115 aa13.45□□□□□ -0.26
RHBDD3-202ENST00000406335 AP5S1Q9NUS5 200 aa13.45□□□□□ -0.26
RHBDD3-202ENST00000406335 H7C423 109 aa13.44□□□□□ -0.26
RHBDD3-202ENST00000406335 ESDP10768 282 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms