RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 KRTDAPP60985 99 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 TDRG1Q3Y452 100 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 PRR9Q5T870 116 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 LCE3AQ5TA76 89 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 BRD3OSQ6XYD6 125 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 FAM223AQ8IWN6 122 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 FAM19A2Q8N3H0 131 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 CHCHD1Q96BP2 118 aaKnown RBP2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 USMG5Q96IX5 58 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 SLC50A1Q9BRV3 221 aa2.68□□□□□ -1.98
HMGB3P18-201ENST00000406327 ADGRG4Q8IZF6 3080 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 POLEQ07864 2286 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 MALRD1Q5VYJ5 2156 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 C2orf70A6NJV1 201 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 FABP5P3A8MUU1 101 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 C8orf87E5RJ46 101 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 H3BUA1 57 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 H3BUX3 64 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 M0QZK8 103 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 M0R2Z0 102 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 IGHG2P01859 326 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 TRGV3P03979 118 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 SLC25A16P16260 332 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 HLA-DMBP28068 263 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 ZNF80P51504 273 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 RPS20P60866 119 aaKnown RBP2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 BLCAPP62952 87 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 EBLN2Q6P2I7 272 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 LYZL1Q6UWQ5 148 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 Q6ZQT7 251 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 BORCS7Q96B45 105 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 MIEN1Q9BRT3 115 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 C2orf88Q9BSF0 95 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 TMEM208Q9BTX3 173 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 VAMP8Q9BV40 100 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 AGPAT4-IT1Q9H0P7 198 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 LINC00527Q9UJ94 153 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 PIEZO2Q9H5I5 2752 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 NOTCH2Q04721 2471 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 DSCAML1Q8TD84 2053 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 PTPRQQ9UMZ3 2332 aa2.67□□□□□ -1.98
HMGB3P18-201ENST00000406327 SPENQ96T58 3664 aaKnown RBP2.66□□□□□ -1.98
HMGB3P18-201ENST00000406327 DCHS1Q96JQ0 3298 aa2.66□□□□□ -1.98
HMGB3P18-201ENST00000406327 ARFGEF3Q5TH69 2177 aa2.66□□□□□ -1.98
HMGB3P18-201ENST00000406327 TMSB15BA0A087X1C1 80 aa2.66□□□□□ -1.98
HMGB3P18-201ENST00000406327 C20orf202A1L168 122 aa2.66□□□□□ -1.98
HMGB3P18-201ENST00000406327 NDUFA4O00483 81 aa2.66□□□□□ -1.98
HMGB3P18-201ENST00000406327 IGLC6P0CF74 106 aa2.66□□□□□ -1.98
HMGB3P18-201ENST00000406327 HIST1H1AQ02539 215 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P18-201ENST00000406327 PMCHL1Q16048 86 aa2.66□□□□□ -1.98
HMGB3P18-201ENST00000406327 KRTAP13-2Q52LG2 175 aa2.66□□□□□ -1.98
HMGB3P18-201ENST00000406327 ZNF705AQ6ZN79 300 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P18-201ENST00000406327 C1orf64Q8NEQ6 169 aa2.66□□□□□ -1.98
HMGB3P18-201ENST00000406327 Q8TAT8 98 aa2.66□□□□□ -1.98
HMGB3P18-201ENST00000406327 TMEM70Q9BUB7 260 aa2.66□□□□□ -1.98
HMGB3P18-201ENST00000406327 CNFNQ9BYD5 112 aa2.66□□□□□ -1.98
HMGB3P18-201ENST00000406327 ICOSQ9Y6W8 199 aa2.66□□□□□ -1.98
HMGB3P18-201ENST00000406327 U3KQK5 164 aa2.66□□□□□ -1.98
HMGB3P18-201ENST00000406327 DOCK11Q5JSL3 2073 aa2.65□□□□□ -1.98
HMGB3P18-201ENST00000406327 PLCE1Q9P212 2302 aa2.65□□□□□ -1.98
HMGB3P18-201ENST00000406327 YLPM1P49750 1951 aaKnown RBP2.65□□□□□ -1.98
HMGB3P18-201ENST00000406327 ZGRF1Q86YA3 2104 aa2.65□□□□□ -1.98
HMGB3P18-201ENST00000406327 CEP295Q9C0D2 2601 aa2.65□□□□□ -1.98
HMGB3P18-201ENST00000406327 ICE1Q9Y2F5 2266 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 A0A096LNT2 108 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 IGHV1-24A0A0C4DH33 117 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 SYS1-DBNDD2H3BUS1 97 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 M0R143 59 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 IGHV3-53P01767 116 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 PRB1P04280 392 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 COX6B1P14854 86 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 DEFB112Q30KQ8 113 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 MRPL51Q4U2R6 128 aaKnown RBP2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 SPATA45Q537H7 98 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 TMEM78Q5T7P6 136 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 SCGB1D4Q6XE38 83 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 FAM19A3Q7Z5A8 133 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 SPATA12Q7Z6I5 190 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 OR4X2Q8NGF9 303 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 PRELID3AQ96N28 172 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 SNHG12Q9BXW3 62 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 TMEM191AQ9H0A3 160 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 HSPB8Q9UJY1 196 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 TP53TG1Q9Y2A0 90 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 LENEPQ9Y5L5 61 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 ACACAQ13085 2346 aa2.65□□□□□ -1.99
HMGB3P18-201ENST00000406327 TLN1Q9Y490 2541 aaKnown RBP2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 MUC21A0A0G2JKD1 596 aa2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 MUC21A0A140T8X8 626 aa2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 A0A1B0GV90 55 aa2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 D6R8Y8 96 aa2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 H3BQ85 93 aa2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 OVOL1O14753 267 aa2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 LEPROTL1O95214 131 aa2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 PPBPP02775 128 aa2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 IGLC3P0DOY3 106 aa2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 IFI27P40305 119 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 DAD1P61803 113 aa2.64□□□□□ -1.99
HMGB3P18-201ENST00000406327 GPHB5Q86YW7 130 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms