RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 IQCF6A8MYZ5 107 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 H3BPC8 53 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 CLPSP04118 112 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 CD24P25063 80 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 RPL28P46779 137 aaKnown RBP2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 ROMO1P60602 79 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 UBE2D3P61077 147 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 UBE2D2P62837 147 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 LYZL1Q6UWQ5 148 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 TOMM5Q8N4H5 51 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 NHP2Q9NX24 153 aaKnown RBP2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 FAM215AQ9Y5M1 114 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 MINOS1-NBL1R4GNA1 71 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 MAST1Q9Y2H9 1570 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 C5P01031 1676 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 CASP8AP2Q9UKL3 1982 aa2.43□□□□□ -2.02
HMGB1P13-201ENST00000406019 TOP2BQ02880 1626 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 WDR90Q96KV7 1748 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 HEATR5AQ86XA9 2040 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 A0A0D9SFI3 127 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 NPYP01303 97 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 CTSGP08311 255 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 KLKP1Q107X0 134 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 ZNF791Q3KP31 576 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 ASB16-AS1Q495Z4 193 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 SPANXN1Q5VSR9 72 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 C6orf201Q7Z4U5 140 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 VMO1Q7Z5L0 202 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 TMEM141Q96I45 108 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 XAGE1AQ9HD64 81 aa2.42□□□□□ -2.02
HMGB1P13-201ENST00000406019 ARHGAP32A7KAX9 2087 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 MYO16Q9Y6X6 1858 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 MUC22E2RYF6 1773 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 PLCH1Q4KWH8 1693 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 CD163L1Q9NR16 1453 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 TSC2P49815 1807 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 SLX4Q8IY92 1834 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 TRAV22A0A0B4J277 110 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 TEX49A0A1B0GTD5 131 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 ODF3BA8MYP8 253 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 HCG22E2RYF7 251 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 ACYP1P07311 99 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 Q5VV11 94 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 HCP5Q6MZN7 132 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 C20orf197Q8N268 126 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 DYNLRB2Q8TF09 96 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 PSORS1C2Q9UIG4 136 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 POLR1AO95602 1720 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 KIF21BO75037 1637 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 LRP5O75197 1615 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 EIF2AK4Q9P2K8 1649 aaKnown RBP2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 CPS1P31327 1500 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 MED12LQ86YW9 2145 aa2.41□□□□□ -2.02
HMGB1P13-201ENST00000406019 TJP1Q07157 1748 aa2.4□□□□□ -2.02
HMGB1P13-201ENST00000406019 TNS1Q9HBL0 1735 aaKnown RBP2.4□□□□□ -2.02
HMGB1P13-201ENST00000406019 PLXNA3P51805 1871 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 hDV103S1A0JD37 113 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 F8WEM9 126 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 NDUFC1O43677 76 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 S100A3P33764 101 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 SPINT3P49223 89 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 FXYD7P58549 80 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 MIAQ16674 131 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 GDF5OSQ5U4N7 250 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 SLC48A1Q6P1K1 146 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 PPP1R1CQ8WVI7 109 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 Q96M85 177 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 PSENENQ9NZ42 101 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 LOC285556D6RIA3 1793 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 ARHGEF5Q12774 1597 aa2.4□□□□□ -2.03
HMGB1P13-201ENST00000406019 USP32Q8NFA0 1604 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 COL14A1Q05707 1796 aaKnown RBP2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 A0A0J9YX75 114 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 LOC285095A0A1B0GVY8 99 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 H3BVH4 76 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 CRPP02741 224 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 C9orf116Q5BN46 136 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 Q6ZQT0 140 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 Q8N6K4 173 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 SMIM4Q8WVI0 70 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 C20orf166-AS1Q96NR2 134 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 MGAMO43451 1857 aa2.39□□□□□ -2.03
HMGB1P13-201ENST00000406019 SLIT2O94813 1529 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 TULP4Q9NRJ4 1543 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 IGKV1D-42A0A075B6H8 117 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 MYMXA0A1B0GTQ4 84 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 TMEM30CPA0ZSE6 113 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 C11orf86A6NJI1 115 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 HMGN2P05204 90 aaKnown RBP2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 MIFP14174 115 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 FAM27BQ5VT28 67 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 PKD1L3Q7Z443 1732 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 SMIM7Q9BQ49 75 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 TIMM21Q9BVV7 248 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 CDC42SE1Q9NRR8 79 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 PLXNA1Q9UIW2 1896 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 CCL26Q9Y258 94 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 KDM6BO15054 1643 aa2.38□□□□□ -2.03
HMGB1P13-201ENST00000406019 KIAA1549Q9HCM3 1950 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms