RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 ZNF22P17026 224 aaPredicted RBP14.61□□□□□ -0.07
CCDC47-202ENST00000403162 I3L3M4 83 aa14.61□□□□□ -0.07
CCDC47-202ENST00000403162 RHODO00212 210 aa14.61□□□□□ -0.07
CCDC47-202ENST00000403162 FHL3Q13643 280 aa14.61□□□□□ -0.07
CCDC47-202ENST00000403162 A4D1N5 150 aa14.6□□□□□ -0.07
CCDC47-202ENST00000403162 Q6YL49 198 aa14.6□□□□□ -0.07
CCDC47-202ENST00000403162 A0A0B4J2C4 111 aa14.6□□□□□ -0.07
CCDC47-202ENST00000403162 IGKV3-20P01619 116 aa14.6□□□□□ -0.07
CCDC47-202ENST00000403162 CRYBA4P53673 196 aa14.6□□□□□ -0.07
CCDC47-202ENST00000403162 TMEM95Q3KNT9 176 aa14.6□□□□□ -0.07
CCDC47-202ENST00000403162 SONP18583 2426 aaKnown RBP14.59□□□□□ -0.07
CCDC47-202ENST00000403162 SCGB1C2P0DMR2 95 aa14.59□□□□□ -0.07
CCDC47-202ENST00000403162 RNF152Q8N8N0 203 aa14.59□□□□□ -0.07
CCDC47-202ENST00000403162 IGLV4-3A0A075B6K6 122 aa14.58□□□□□ -0.07
CCDC47-202ENST00000403162 CYSRT1A8MQ03 144 aa14.58□□□□□ -0.07
CCDC47-202ENST00000403162 M0QXV9 152 aa14.58□□□□□ -0.07
CCDC47-202ENST00000403162 IGHV3-33P01772 117 aa14.58□□□□□ -0.07
CCDC47-202ENST00000403162 TMEM263Q8WUH6 116 aaKnown RBP14.58□□□□□ -0.07
CCDC47-202ENST00000403162 TMEM89A2RUT3 159 aa14.58□□□□□ -0.08
CCDC47-202ENST00000403162 EIF4EBP3O60516 100 aaPredicted RBP14.58□□□□□ -0.08
CCDC47-202ENST00000403162 SPINK13Q1W4C9 94 aa14.58□□□□□ -0.08
CCDC47-202ENST00000403162 CKS1BP61024 79 aa14.57□□□□□ -0.08
CCDC47-202ENST00000403162 EDA2RQ9HAV5 297 aa14.57□□□□□ -0.08
CCDC47-202ENST00000403162 Q6ZUT4 128 aa14.57□□□□□ -0.08
CCDC47-202ENST00000403162 TRGV11A0A075B6L2 103 aa14.56□□□□□ -0.08
CCDC47-202ENST00000403162 SPINK8P0C7L1 97 aa14.56□□□□□ -0.08
CCDC47-202ENST00000403162 ANKRD29Q8N6D5 301 aa14.56□□□□□ -0.08
CCDC47-202ENST00000403162 SETXQ7Z333 2677 aaKnown RBP14.56□□□□□ -0.08
CCDC47-202ENST00000403162 A0A0J9YXV3 536 aa14.56□□□□□ -0.08
CCDC47-202ENST00000403162 M0R2P5 195 aa14.56□□□□□ -0.08
CCDC47-202ENST00000403162 PYGO1Q9Y3Y4 419 aa14.56□□□□□ -0.08
CCDC47-202ENST00000403162 MXRA5Q9NR99 2828 aa14.55□□□□□ -0.08
CCDC47-202ENST00000403162 TRAV2A0A0B4J234 112 aa14.55□□□□□ -0.08
CCDC47-202ENST00000403162 MUSTN1Q8IVN3 82 aa14.55□□□□□ -0.08
CCDC47-202ENST00000403162 RAX2Q96IS3 184 aa14.55□□□□□ -0.08
CCDC47-202ENST00000403162 VPREB3Q9UKI3 123 aa14.55□□□□□ -0.08
CCDC47-202ENST00000403162 ERG28Q9UKR5 140 aa14.55□□□□□ -0.08
CCDC47-202ENST00000403162 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.54□□□□□ -0.08
CCDC47-202ENST00000403162 MT-ATP8P03928 68 aa14.54□□□□□ -0.08
CCDC47-202ENST00000403162 XGP55808 180 aa14.54□□□□□ -0.08
CCDC47-202ENST00000403162 DUX5Q96PT3 197 aa14.54□□□□□ -0.08
CCDC47-202ENST00000403162 IGHV3-64A0A075B6Q5 118 aa14.53□□□□□ -0.08
CCDC47-202ENST00000403162 SLC25A20O43772 301 aa14.53□□□□□ -0.08
CCDC47-202ENST00000403162 C10orf99Q6UWK7 81 aa14.53□□□□□ -0.08
CCDC47-202ENST00000403162 ANK3Q12955 4377 aaKnown RBP14.53□□□□□ -0.08
CCDC47-202ENST00000403162 A0A0J9YXY3 114 aa14.53□□□□□ -0.08
CCDC47-202ENST00000403162 HIVEP2P31629 2446 aa14.52□□□□□ -0.09
CCDC47-202ENST00000403162 MRPS36P82909 103 aaKnown RBP14.51□□□□□ -0.09
CCDC47-202ENST00000403162 HIVEP1P15822 2718 aa14.51□□□□□ -0.09
CCDC47-202ENST00000403162 INAFM1C9JVW0 142 aa14.51□□□□□ -0.09
CCDC47-202ENST00000403162 IGHV3-30-3P0DP02 117 aa14.51□□□□□ -0.09
CCDC47-202ENST00000403162 FAM104AQ969W3 186 aa14.51□□□□□ -0.09
CCDC47-202ENST00000403162 C9JAW5 83 aa14.5□□□□□ -0.09
CCDC47-202ENST00000403162 TMEM262E9PQX1 116 aa14.5□□□□□ -0.09
CCDC47-202ENST00000403162 SYNJ2BPP57105 145 aa14.5□□□□□ -0.09
CCDC47-202ENST00000403162 CD28P10747 220 aa14.5□□□□□ -0.09
CCDC47-202ENST00000403162 TIMM21Q9BVV7 248 aa14.5□□□□□ -0.09
CCDC47-202ENST00000403162 LITAFQ99732 161 aa14.49□□□□□ -0.09
CCDC47-202ENST00000403162 TMEM86BQ8N661 226 aa14.49□□□□□ -0.09
CCDC47-202ENST00000403162 LINC01600Q96MT4 127 aa14.49□□□□□ -0.09
CCDC47-202ENST00000403162 DNAJC9-AS1A6NH13 148 aa14.48□□□□□ -0.09
CCDC47-202ENST00000403162 RBMY1A1P0DJD3 496 aaKnown RBP14.48□□□□□ -0.09
CCDC47-202ENST00000403162 RBMY1CP0DJD4 496 aa14.48□□□□□ -0.09
CCDC47-202ENST00000403162 RBMY1FQ15415 496 aaKnown RBP14.48□□□□□ -0.09
CCDC47-202ENST00000403162 SPXQ9BT56 116 aa14.48□□□□□ -0.09
CCDC47-202ENST00000403162 GEMIN7Q9H840 131 aaKnown RBP14.48□□□□□ -0.09
CCDC47-202ENST00000403162 ATXN8Q156A1 80 aa14.47□□□□□ -0.09
CCDC47-202ENST00000403162 TRBV30A0A0K0K1B3 111 aa14.47□□□□□ -0.09
CCDC47-202ENST00000403162 H7C2G1 150 aa14.47□□□□□ -0.09
CCDC47-202ENST00000403162 ESM1Q9NQ30 184 aa14.46□□□□□ -0.09
CCDC47-202ENST00000403162 IGHV1-58A0A0C4DH39 117 aa14.46□□□□□ -0.1
CCDC47-202ENST00000403162 Q1RN00 199 aa14.46□□□□□ -0.1
CCDC47-202ENST00000403162 SPANXDQ9BXN6 97 aa14.46□□□□□ -0.1
CCDC47-202ENST00000403162 SPANXCQ9NY87 97 aa14.46□□□□□ -0.1
CCDC47-202ENST00000403162 MTORP42345 2549 aa14.45□□□□□ -0.1
CCDC47-202ENST00000403162 A8MTW9 85 aa14.45□□□□□ -0.1
CCDC47-202ENST00000403162 HOXD3P31249 432 aaPredicted RBP14.45□□□□□ -0.1
CCDC47-202ENST00000403162 LINC01620Q4KN68 170 aa14.45□□□□□ -0.1
CCDC47-202ENST00000403162 PIK3CD-AS1Q5SR53 167 aa14.45□□□□□ -0.1
CCDC47-202ENST00000403162 ELANEP08246 267 aa14.44□□□□□ -0.1
CCDC47-202ENST00000403162 TNFRSF18Q9Y5U5 241 aa14.44□□□□□ -0.1
CCDC47-202ENST00000403162 TINCRA0A1B0GVN0 87 aa14.44□□□□□ -0.1
CCDC47-202ENST00000403162 IGHV3-73A0A0B4J1V6 119 aa14.43□□□□□ -0.1
CCDC47-202ENST00000403162 PROK1P58294 105 aa14.43□□□□□ -0.1
CCDC47-202ENST00000403162 SPANXA1Q9NS26 97 aa14.43□□□□□ -0.1
CCDC47-202ENST00000403162 TRAV8-3A0A0A6YYJ7 113 aa14.43□□□□□ -0.1
CCDC47-202ENST00000403162 ADARB2-AS1A8MUL3 147 aa14.43□□□□□ -0.1
CCDC47-202ENST00000403162 TRIAP1O43715 76 aa14.42□□□□□ -0.1
CCDC47-202ENST00000403162 CEMP1Q6PRD7 247 aaPredicted RBP14.42□□□□□ -0.1
CCDC47-202ENST00000403162 UBE2E2Q96LR5 201 aa14.42□□□□□ -0.1
CCDC47-202ENST00000403162 NDUFA12Q9UI09 145 aa14.42□□□□□ -0.1
CCDC47-202ENST00000403162 KNCNA6PVL3 124 aa14.41□□□□□ -0.1
CCDC47-202ENST00000403162 VSIG2Q96IQ7 327 aa14.41□□□□□ -0.1
CCDC47-202ENST00000403162 CHCHD7Q9BUK0 85 aa14.41□□□□□ -0.1
CCDC47-202ENST00000403162 ZNF702PQ9H963 129 aa14.41□□□□□ -0.1
CCDC47-202ENST00000403162 F8P00451 2351 aa14.41□□□□□ -0.1
CCDC47-202ENST00000403162 MIAQ16674 131 aa14.41□□□□□ -0.1
CCDC47-202ENST00000403162 UBE2D4Q9Y2X8 147 aa14.41□□□□□ -0.1
CCDC47-202ENST00000403162 NACAE9PAV3 2078 aa14.4□□□□□ -0.1
CCDC47-202ENST00000403162 TRBV10-2A0A0K0K1G8 114 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms