RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 A0A1B0GUV1 79 aa12.76□□□□□ -0.37
RTN4-207ENST00000402434 NCR2O95944 276 aa12.76□□□□□ -0.37
RTN4-207ENST00000402434 ANGP03950 147 aaKnown RBP12.76□□□□□ -0.37
RTN4-207ENST00000402434 ADCYAP1P18509 176 aa12.76□□□□□ -0.37
RTN4-207ENST00000402434 MAPKAPK5-AS1Q8N8E1 139 aa12.76□□□□□ -0.37
RTN4-207ENST00000402434 PRR34Q9NV39 138 aa12.76□□□□□ -0.37
RTN4-207ENST00000402434 AMTP48728 403 aa12.75□□□□□ -0.37
RTN4-207ENST00000402434 POLR2KP53803 58 aaKnown RBP12.75□□□□□ -0.37
RTN4-207ENST00000402434 HBBP68871 147 aa12.75□□□□□ -0.37
RTN4-207ENST00000402434 CDPF1Q6NVV7 123 aa12.75□□□□□ -0.37
RTN4-207ENST00000402434 MRPL54Q6P161 138 aaKnown RBP12.75□□□□□ -0.37
RTN4-207ENST00000402434 TMEM70Q9BUB7 260 aa12.75□□□□□ -0.37
RTN4-207ENST00000402434 ST20Q9HBF5 79 aa12.75□□□□□ -0.37
RTN4-207ENST00000402434 I3L3M4 83 aa12.74□□□□□ -0.37
RTN4-207ENST00000402434 S100A8P05109 93 aa12.74□□□□□ -0.37
RTN4-207ENST00000402434 MRPL51Q4U2R6 128 aaKnown RBP12.74□□□□□ -0.37
RTN4-207ENST00000402434 TRBV27A0A0K0K1C4 114 aa12.73□□□□□ -0.37
RTN4-207ENST00000402434 LINC00862A6NCI5 91 aa12.73□□□□□ -0.37
RTN4-207ENST00000402434 PPP1R17O96001 155 aa12.73□□□□□ -0.37
RTN4-207ENST00000402434 ATP5L2Q7Z4Y8 100 aa12.73□□□□□ -0.37
RTN4-207ENST00000402434 COMMD7Q86VX2 200 aa12.73□□□□□ -0.37
RTN4-207ENST00000402434 NRACQ8N912 160 aa12.73□□□□□ -0.37
RTN4-207ENST00000402434 IGKV2D-24A0A075B6R9 120 aa12.72□□□□□ -0.37
RTN4-207ENST00000402434 F8W036 122 aa12.72□□□□□ -0.37
RTN4-207ENST00000402434 SMKR1H3BMG3 65 aa12.72□□□□□ -0.37
RTN4-207ENST00000402434 PMCHP20382 165 aa12.72□□□□□ -0.37
RTN4-207ENST00000402434 C20orf203Q8NBC4 194 aa12.72□□□□□ -0.37
RTN4-207ENST00000402434 SEC11CQ9BY50 192 aa12.72□□□□□ -0.37
RTN4-207ENST00000402434 KIAA1109Q2LD37 5005 aa12.72□□□□□ -0.37
RTN4-207ENST00000402434 CRPP02741 224 aa12.72□□□□□ -0.37
RTN4-207ENST00000402434 MIAQ16674 131 aa12.72□□□□□ -0.37
RTN4-207ENST00000402434 LINC00269Q8N2A0 174 aa12.72□□□□□ -0.37
RTN4-207ENST00000402434 IGLV4-60A0A075B6I1 120 aa12.71□□□□□ -0.38
RTN4-207ENST00000402434 H7C423 109 aa12.71□□□□□ -0.38
RTN4-207ENST00000402434 UBE2L6O14933 153 aa12.71□□□□□ -0.38
RTN4-207ENST00000402434 FUSP35637 526 aaKnown RBP eCLIP12.71□□□□□ -0.381e-8■□□□□ 8.2
RTN4-207ENST00000402434 Q8N814 137 aa12.71□□□□□ -0.38
RTN4-207ENST00000402434 TRBV24-1A0A075B6N3 115 aa12.7□□□□□ -0.38
RTN4-207ENST00000402434 TSHBP01222 138 aa12.7□□□□□ -0.38
RTN4-207ENST00000402434 APCSP02743 223 aa12.7□□□□□ -0.38
RTN4-207ENST00000402434 SUMO2P61956 95 aaKnown RBP12.7□□□□□ -0.38
RTN4-207ENST00000402434 WFDC2Q14508 124 aa12.7□□□□□ -0.38
RTN4-207ENST00000402434 C1orf43Q9BWL3 253 aa12.7□□□□□ -0.38
RTN4-207ENST00000402434 VCYO14598 125 aa12.69□□□□□ -0.38
RTN4-207ENST00000402434 ESDP10768 282 aa12.69□□□□□ -0.38
RTN4-207ENST00000402434 NTN5Q8WTR8 489 aaPredicted RBP12.69□□□□□ -0.38
RTN4-207ENST00000402434 DYNC1H1Q14204 4646 aaKnown RBP12.69□□□□□ -0.38
RTN4-207ENST00000402434 CKS2P33552 79 aa12.68□□□□□ -0.38
RTN4-207ENST00000402434 REG3AQ06141 175 aa12.68□□□□□ -0.38
RTN4-207ENST00000402434 BAALCQ8WXS3 180 aa12.68□□□□□ -0.38
RTN4-207ENST00000402434 IMMP2LQ96T52 175 aa12.68□□□□□ -0.38
RTN4-207ENST00000402434 C10orf91Q5T1B1 145 aa12.67□□□□□ -0.38
RTN4-207ENST00000402434 BTF3L4Q96K17 158 aa12.67□□□□□ -0.38
RTN4-207ENST00000402434 C20orf78Q9BR46 151 aa12.67□□□□□ -0.38
RTN4-207ENST00000402434 TMEM242Q9NWH2 141 aa12.67□□□□□ -0.38
RTN4-207ENST00000402434 CDK2AP2O75956 126 aa12.66□□□□□ -0.38
RTN4-207ENST00000402434 PPBPP02775 128 aa12.66□□□□□ -0.38
RTN4-207ENST00000402434 KRTAP26-1Q6PEX3 210 aa12.66□□□□□ -0.38
RTN4-207ENST00000402434 CLPSL2Q6UWE3 100 aa12.66□□□□□ -0.38
RTN4-207ENST00000402434 CTDSP1Q9GZU7 261 aa12.66□□□□□ -0.38
RTN4-207ENST00000402434 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.65□□□□□ -0.38
RTN4-207ENST00000402434 IGKV2-29A2NJV5 120 aaPredicted RBP12.65□□□□□ -0.38
RTN4-207ENST00000402434 D6R8Y8 96 aa12.65□□□□□ -0.38
RTN4-207ENST00000402434 LECT2O14960 151 aa12.65□□□□□ -0.38
RTN4-207ENST00000402434 FGF6P10767 208 aa12.65□□□□□ -0.38
RTN4-207ENST00000402434 RPL32P62910 135 aaKnown RBP12.65□□□□□ -0.38
RTN4-207ENST00000402434 TRAV8-4A0A0B4J246 113 aa12.65□□□□□ -0.38
RTN4-207ENST00000402434 TNFRSF6BO95407 300 aa12.65□□□□□ -0.38
RTN4-207ENST00000402434 AMMECR1LQ6DCA0 310 aa12.65□□□□□ -0.38
RTN4-207ENST00000402434 PHOX2AO14813 284 aa12.64□□□□□ -0.39
RTN4-207ENST00000402434 ZNF25P17030 456 aaPredicted RBP12.64□□□□□ -0.39
RTN4-207ENST00000402434 KIR2DL4Q99706 377 aa12.64□□□□□ -0.39
RTN4-207ENST00000402434 CARHSP1Q9Y2V2 147 aaKnown RBP12.64□□□□□ -0.39
RTN4-207ENST00000402434 IGLV5-52A0A0A0MRZ9 124 aa12.63□□□□□ -0.39
RTN4-207ENST00000402434 LRP1BQ9NZR2 4599 aa12.62□□□□□ -0.39
RTN4-207ENST00000402434 GCSHP23434 173 aa12.62□□□□□ -0.39
RTN4-207ENST00000402434 RNASEKQ6P5S7 137 aaKnown RBP12.62□□□□□ -0.39
RTN4-207ENST00000402434 MRPL52Q86TS9 123 aaKnown RBP12.62□□□□□ -0.39
RTN4-207ENST00000402434 ORMDL3Q8N138 153 aa12.62□□□□□ -0.39
RTN4-207ENST00000402434 C7orf77A4D0Y5 90 aa12.61□□□□□ -0.39
RTN4-207ENST00000402434 NPYP01303 97 aa12.61□□□□□ -0.39
RTN4-207ENST00000402434 FCER1GP30273 86 aa12.61□□□□□ -0.39
RTN4-207ENST00000402434 KRTAP10-1P60331 282 aa12.61□□□□□ -0.39
RTN4-207ENST00000402434 TMEM136Q6ZRR5 245 aa12.61□□□□□ -0.39
RTN4-207ENST00000402434 HERC2O95714 4834 aa12.61□□□□□ -0.39
RTN4-207ENST00000402434 IGLV10-54A0A075B6I4 117 aa12.6□□□□□ -0.39
RTN4-207ENST00000402434 SMIM2Q9BVW6 85 aa12.6□□□□□ -0.39
RTN4-207ENST00000402434 TRAV9-1A0A075B6T8 112 aa12.59□□□□□ -0.39
RTN4-207ENST00000402434 PRELID3AQ96N28 172 aa12.59□□□□□ -0.39
RTN4-207ENST00000402434 DNAH5Q8TE73 4624 aa12.59□□□□□ -0.39
RTN4-207ENST00000402434 TCAPO15273 167 aa12.59□□□□□ -0.39
RTN4-207ENST00000402434 HLA-DQA1P01909 254 aa12.59□□□□□ -0.39
RTN4-207ENST00000402434 C14orf177Q52M58 125 aa12.59□□□□□ -0.39
RTN4-207ENST00000402434 TMEM101Q96IK0 257 aa12.59□□□□□ -0.39
RTN4-207ENST00000402434 LAMTOR2Q9Y2Q5 125 aa12.59□□□□□ -0.39
RTN4-207ENST00000402434 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.58□□□□□ -0.4
RTN4-207ENST00000402434 USP17L23D6RBM5 183 aa12.58□□□□□ -0.4
RTN4-207ENST00000402434 CLRN3Q8NCR9 226 aa12.58□□□□□ -0.4
RTN4-207ENST00000402434 OR5A1Q8NGJ0 315 aa12.58□□□□□ -0.4
RTN4-207ENST00000402434 CSDC2Q9Y534 153 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms