RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 H3BMM0 161 aa6.42□□□□□ -1.38
LINC01139-201ENST00000400946 RPL39P62891 51 aaKnown RBP6.42□□□□□ -1.38
LINC01139-201ENST00000400946 MRPS36P82909 103 aaKnown RBP6.42□□□□□ -1.38
LINC01139-201ENST00000400946 C10orf126Q8N4M7 172 aa6.42□□□□□ -1.38
LINC01139-201ENST00000400946 C4orf3Q8WVX3 66 aa6.42□□□□□ -1.38
LINC01139-201ENST00000400946 RNF183Q96D59 192 aa6.42□□□□□ -1.38
LINC01139-201ENST00000400946 AGRNO00468 2067 aa6.42□□□□□ -1.38
LINC01139-201ENST00000400946 MED13LQ71F56 2210 aa6.42□□□□□ -1.38
LINC01139-201ENST00000400946 IGLV4-3A0A075B6K6 122 aa6.41□□□□□ -1.38
LINC01139-201ENST00000400946 TRAV12-2A0A075B6T6 113 aa6.41□□□□□ -1.38
LINC01139-201ENST00000400946 IGHV4-31P0DP07 118 aa6.41□□□□□ -1.38
LINC01139-201ENST00000400946 WFDC2Q14508 124 aa6.41□□□□□ -1.38
LINC01139-201ENST00000400946 BEAN1Q3B7T3 259 aa6.41□□□□□ -1.38
LINC01139-201ENST00000400946 SBSPONQ8IVN8 264 aa6.41□□□□□ -1.38
LINC01139-201ENST00000400946 KLHL30-AS1Q8NEE0 82 aa6.41□□□□□ -1.38
LINC01139-201ENST00000400946 LINC01600Q96MT4 127 aa6.41□□□□□ -1.38
LINC01139-201ENST00000400946 DUX5Q96PT3 197 aa6.41□□□□□ -1.38
LINC01139-201ENST00000400946 SPATA25Q9BR10 227 aa6.41□□□□□ -1.38
LINC01139-201ENST00000400946 TIMM21Q9BVV7 248 aa6.41□□□□□ -1.38
LINC01139-201ENST00000400946 PRO1854Q9UHT4 67 aa6.41□□□□□ -1.38
LINC01139-201ENST00000400946 TACC2O95359 2948 aa6.41□□□□□ -1.38
LINC01139-201ENST00000400946 TSPAN13O95857 204 aa6.4□□□□□ -1.38
LINC01139-201ENST00000400946 ZNF22P17026 224 aaPredicted RBP6.4□□□□□ -1.38
LINC01139-201ENST00000400946 CMC4P56277 68 aaPredicted RBP6.4□□□□□ -1.38
LINC01139-201ENST00000400946 CFAP126Q5VTH2 177 aa6.4□□□□□ -1.38
LINC01139-201ENST00000400946 C10orf99Q6UWK7 81 aa6.4□□□□□ -1.38
LINC01139-201ENST00000400946 SIGMAR1Q99720 223 aa6.4□□□□□ -1.38
LINC01139-201ENST00000400946 TNFRSF18Q9Y5U5 241 aa6.4□□□□□ -1.38
LINC01139-201ENST00000400946 TINCRA0A1B0GVN0 87 aa6.4□□□□□ -1.39
LINC01139-201ENST00000400946 IGHV3-53P01767 116 aa6.4□□□□□ -1.39
LINC01139-201ENST00000400946 DEFB131AP59861 70 aa6.4□□□□□ -1.39
LINC01139-201ENST00000400946 SMAGPQ0VAQ4 97 aa6.4□□□□□ -1.39
LINC01139-201ENST00000400946 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.4□□□□□ -1.39
LINC01139-201ENST00000400946 RAX2Q96IS3 184 aa6.4□□□□□ -1.39
LINC01139-201ENST00000400946 OTOGQ6ZRI0 2925 aa6.39□□□□□ -1.39
LINC01139-201ENST00000400946 CREBBPQ92793 2442 aa6.39□□□□□ -1.39
LINC01139-201ENST00000400946 POLQO75417 2590 aa6.39□□□□□ -1.39
LINC01139-201ENST00000400946 GAGE12HA6NDE8 117 aa6.39□□□□□ -1.39
LINC01139-201ENST00000400946 TIMM17BO60830 172 aa6.39□□□□□ -1.39
LINC01139-201ENST00000400946 IGKV3-20P01619 116 aa6.39□□□□□ -1.39
LINC01139-201ENST00000400946 CFC1BP0CG36 223 aa6.39□□□□□ -1.39
LINC01139-201ENST00000400946 CFC1P0CG37 223 aa6.39□□□□□ -1.39
LINC01139-201ENST00000400946 TSPEAR-AS2P59090 65 aa6.39□□□□□ -1.39
LINC01139-201ENST00000400946 DEFB113Q30KQ7 82 aa6.39□□□□□ -1.39
LINC01139-201ENST00000400946 DUX3Q96PT4 197 aa6.39□□□□□ -1.39
LINC01139-201ENST00000400946 C1QTNF4Q9BXJ3 329 aa6.39□□□□□ -1.39
LINC01139-201ENST00000400946 AKAP9Q99996 3911 aa6.38□□□□□ -1.39
LINC01139-201ENST00000400946 IGHV1-58A0A0C4DH39 117 aa6.38□□□□□ -1.39
LINC01139-201ENST00000400946 A0A0J9YXY3 114 aa6.38□□□□□ -1.39
LINC01139-201ENST00000400946 RS1O15537 224 aa6.38□□□□□ -1.39
LINC01139-201ENST00000400946 INSP01308 110 aa6.38□□□□□ -1.39
LINC01139-201ENST00000400946 TIRAPP58753 221 aa6.38□□□□□ -1.39
LINC01139-201ENST00000400946 ETDBQ3ZM63 59 aa6.38□□□□□ -1.39
LINC01139-201ENST00000400946 PRRC2AP48634 2157 aaKnown RBP6.38□□□□□ -1.39
LINC01139-201ENST00000400946 ANKRD17O75179 2603 aaKnown RBP6.38□□□□□ -1.39
LINC01139-201ENST00000400946 APOMO95445 188 aa6.37□□□□□ -1.39
LINC01139-201ENST00000400946 RBMY1A1P0DJD3 496 aaKnown RBP6.37□□□□□ -1.39
LINC01139-201ENST00000400946 RBMY1CP0DJD4 496 aa6.37□□□□□ -1.39
LINC01139-201ENST00000400946 CD28P10747 220 aa6.37□□□□□ -1.39
LINC01139-201ENST00000400946 FOXI1Q12951 378 aa6.37□□□□□ -1.39
LINC01139-201ENST00000400946 RBMY1FQ15415 496 aaKnown RBP6.37□□□□□ -1.39
LINC01139-201ENST00000400946 DEFB114Q30KQ6 69 aa6.37□□□□□ -1.39
LINC01139-201ENST00000400946 TEN1Q86WV5 123 aa6.37□□□□□ -1.39
LINC01139-201ENST00000400946 DYNLRB2Q8TF09 96 aa6.37□□□□□ -1.39
LINC01139-201ENST00000400946 PPDPFLQ8WWR9 84 aa6.37□□□□□ -1.39
LINC01139-201ENST00000400946 FAM110AQ9BQ89 295 aa6.37□□□□□ -1.39
LINC01139-201ENST00000400946 SPANXDQ9BXN6 97 aa6.37□□□□□ -1.39
LINC01139-201ENST00000400946 PPDPFQ9H3Y8 114 aa6.37□□□□□ -1.39
LINC01139-201ENST00000400946 MAP6D1Q9H9H5 199 aa6.37□□□□□ -1.39
LINC01139-201ENST00000400946 SPANXCQ9NY87 97 aa6.37□□□□□ -1.39
LINC01139-201ENST00000400946 SPG11Q96JI7 2443 aa6.37□□□□□ -1.39
LINC01139-201ENST00000400946 IGLV5-45A0A087WSX0 123 aa6.36□□□□□ -1.39
LINC01139-201ENST00000400946 LOC107984156A0A0G2JMH3 177 aa6.36□□□□□ -1.39
LINC01139-201ENST00000400946 A0A0J9YXV3 536 aa6.36□□□□□ -1.39
LINC01139-201ENST00000400946 TRBV10-1A0A0K0K1A3 114 aa6.36□□□□□ -1.39
LINC01139-201ENST00000400946 KNCNA6PVL3 124 aa6.36□□□□□ -1.39
LINC01139-201ENST00000400946 IGHV3-33P01772 117 aa6.36□□□□□ -1.39
LINC01139-201ENST00000400946 IFITM1P13164 125 aa6.36□□□□□ -1.39
LINC01139-201ENST00000400946 EMP1P54849 157 aa6.36□□□□□ -1.39
LINC01139-201ENST00000400946 SLURP1P55000 103 aa6.36□□□□□ -1.39
LINC01139-201ENST00000400946 FAM19A3Q7Z5A8 133 aa6.36□□□□□ -1.39
LINC01139-201ENST00000400946 ARL17AQ8IVW1 177 aa6.36□□□□□ -1.39
LINC01139-201ENST00000400946 TMEM61Q8N0U2 210 aa6.36□□□□□ -1.39
LINC01139-201ENST00000400946 C11orf72Q8NBR9 251 aa6.36□□□□□ -1.39
LINC01139-201ENST00000400946 TMEM263Q8WUH6 116 aaKnown RBP6.36□□□□□ -1.39
LINC01139-201ENST00000400946 YAE1D1Q9NRH1 226 aa6.36□□□□□ -1.39
LINC01139-201ENST00000400946 ERG28Q9UKR5 140 aa6.36□□□□□ -1.39
LINC01139-201ENST00000400946 UBE2D4Q9Y2X8 147 aa6.36□□□□□ -1.39
LINC01139-201ENST00000400946 CSDC2Q9Y534 153 aaKnown RBP6.36□□□□□ -1.39
LINC01139-201ENST00000400946 MYO9AB2RTY4 2548 aa6.36□□□□□ -1.39
LINC01139-201ENST00000400946 TRBV30A0A0K0K1B3 111 aa6.35□□□□□ -1.39
LINC01139-201ENST00000400946 RBMY1BA6NDE4 496 aaKnown RBP6.35□□□□□ -1.39
LINC01139-201ENST00000400946 RBMY1EA6NEQ0 496 aaKnown RBP6.35□□□□□ -1.39
LINC01139-201ENST00000400946 RBMY1DP0C7P1 496 aaKnown RBP6.35□□□□□ -1.39
LINC01139-201ENST00000400946 IGHV3-30-3P0DP02 117 aa6.35□□□□□ -1.39
LINC01139-201ENST00000400946 PSMB2P49721 201 aa6.35□□□□□ -1.39
LINC01139-201ENST00000400946 FAM104AQ969W3 186 aa6.35□□□□□ -1.39
LINC01139-201ENST00000400946 VSIG2Q96IQ7 327 aa6.35□□□□□ -1.39
LINC01139-201ENST00000400946 CHCHD7Q9BUK0 85 aa6.35□□□□□ -1.39
LINC01139-201ENST00000400946 TSSC4Q9Y5U2 329 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms