RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 WFDC9Q8NEX5 89 aa7.48□□□□□ -1.21
PTPRM-203ENST00000400060 NCOA6Q14686 2063 aaPredicted RBP7.48□□□□□ -1.21
PTPRM-203ENST00000400060 NDUFB1O75438 58 aa7.47□□□□□ -1.21
PTPRM-203ENST00000400060 SPINK13Q1W4C9 94 aa7.47□□□□□ -1.21
PTPRM-203ENST00000400060 IBA57-AS1B1ANH7 110 aa7.47□□□□□ -1.21
PTPRM-203ENST00000400060 FAM215AQ9Y5M1 114 aa7.47□□□□□ -1.21
PTPRM-203ENST00000400060 TRBV7-6A0A0J9YX20 115 aa7.47□□□□□ -1.21
PTPRM-203ENST00000400060 IGFL2Q6UWQ7 119 aa7.47□□□□□ -1.21
PTPRM-203ENST00000400060 PCDH15Q96QU1 1955 aa7.47□□□□□ -1.21
PTPRM-203ENST00000400060 KIAA1549Q9HCM3 1950 aa7.47□□□□□ -1.21
PTPRM-203ENST00000400060 ZNF561-AS1K7EIQ3 104 aa7.47□□□□□ -1.21
PTPRM-203ENST00000400060 M0QY20 66 aa7.47□□□□□ -1.21
PTPRM-203ENST00000400060 DOCK10Q96BY6 2186 aa7.47□□□□□ -1.21
PTPRM-203ENST00000400060 K7EMT4 169 aa7.46□□□□□ -1.21
PTPRM-203ENST00000400060 CTSZQ9UBR2 303 aa7.46□□□□□ -1.21
PTPRM-203ENST00000400060 SMAD5-AS1Q9Y6J3 95 aa7.46□□□□□ -1.21
PTPRM-203ENST00000400060 PCNX2A6NKB5 2137 aa7.46□□□□□ -1.21
PTPRM-203ENST00000400060 NCR3O14931 201 aa7.46□□□□□ -1.21
PTPRM-203ENST00000400060 GAS8-AS1O95177 125 aa7.46□□□□□ -1.21
PTPRM-203ENST00000400060 OVOL3O00110 214 aa7.46□□□□□ -1.22
PTPRM-203ENST00000400060 TSHBP01222 138 aa7.46□□□□□ -1.22
PTPRM-203ENST00000400060 IGHV7-81A0A0B4J1V7 117 aa7.46□□□□□ -1.22
PTPRM-203ENST00000400060 IGHV3-16A0A0C4DH30 117 aa7.46□□□□□ -1.22
PTPRM-203ENST00000400060 PLAC8L1A1L4L8 177 aa7.46□□□□□ -1.22
PTPRM-203ENST00000400060 POM121L12Q8N7R1 296 aa7.46□□□□□ -1.22
PTPRM-203ENST00000400060 PRSS33Q8NF86 280 aa7.45□□□□□ -1.22
PTPRM-203ENST00000400060 NDUFS5O43920 106 aa7.45□□□□□ -1.22
PTPRM-203ENST00000400060 PCNX1Q96RV3 2341 aa7.45□□□□□ -1.22
PTPRM-203ENST00000400060 RETNQ9HD89 108 aa7.45□□□□□ -1.22
PTPRM-203ENST00000400060 GTF3C1Q12789 2109 aa7.45□□□□□ -1.22
PTPRM-203ENST00000400060 CEMP1Q6PRD7 247 aaPredicted RBP7.44□□□□□ -1.22
PTPRM-203ENST00000400060 COL6A6A6NMZ7 2263 aa7.44□□□□□ -1.22
PTPRM-203ENST00000400060 ZFAND2AQ8N6M9 145 aa7.44□□□□□ -1.22
PTPRM-203ENST00000400060 IGHV3-38A0A0C4DH36 116 aa7.44□□□□□ -1.22
PTPRM-203ENST00000400060 K7ENP7 123 aa7.44□□□□□ -1.22
PTPRM-203ENST00000400060 FAM19A3Q7Z5A8 133 aa7.44□□□□□ -1.22
PTPRM-203ENST00000400060 SNURFQ9Y675 71 aa7.44□□□□□ -1.22
PTPRM-203ENST00000400060 ABCA1O95477 2261 aa7.44□□□□□ -1.22
PTPRM-203ENST00000400060 TRBV10-1A0A0K0K1A3 114 aa7.44□□□□□ -1.22
PTPRM-203ENST00000400060 DSCR9P59020 149 aa7.44□□□□□ -1.22
PTPRM-203ENST00000400060 K7EQD1 137 aa7.43□□□□□ -1.22
PTPRM-203ENST00000400060 ATRXP46100 2492 aa7.43□□□□□ -1.22
PTPRM-203ENST00000400060 GNLYP22749 145 aa7.43□□□□□ -1.22
PTPRM-203ENST00000400060 GPHB5Q86YW7 130 aa7.43□□□□□ -1.22
PTPRM-203ENST00000400060 USF3Q68DE3 2245 aa7.43□□□□□ -1.22
PTPRM-203ENST00000400060 C11orf21Q9P2W6 132 aa7.42□□□□□ -1.22
PTPRM-203ENST00000400060 CDKN2A-AS1Q9UH64 79 aa7.42□□□□□ -1.22
PTPRM-203ENST00000400060 SPTAN1Q13813 2472 aaKnown RBP7.42□□□□□ -1.22
PTPRM-203ENST00000400060 MALRD1Q5VYJ5 2156 aa7.42□□□□□ -1.22
PTPRM-203ENST00000400060 ABCA4P78363 2273 aa7.42□□□□□ -1.22
PTPRM-203ENST00000400060 HIGD2BQ4VC39 106 aa7.42□□□□□ -1.22
PTPRM-203ENST00000400060 PRYO14603 147 aa7.42□□□□□ -1.22
PTPRM-203ENST00000400060 ESRGQ1W209 222 aa7.42□□□□□ -1.22
PTPRM-203ENST00000400060 AMELXQ99217 191 aa7.42□□□□□ -1.22
PTPRM-203ENST00000400060 G3V318 75 aa7.41□□□□□ -1.22
PTPRM-203ENST00000400060 SAA4P35542 130 aa7.41□□□□□ -1.22
PTPRM-203ENST00000400060 FAM19A4Q96LR4 140 aa7.41□□□□□ -1.22
PTPRM-203ENST00000400060 A0A087WVE0 104 aa7.41□□□□□ -1.22
PTPRM-203ENST00000400060 C10orf142B7Z368 130 aa7.41□□□□□ -1.22
PTPRM-203ENST00000400060 LY6HO94772 140 aa7.41□□□□□ -1.22
PTPRM-203ENST00000400060 MUC7Q8TAX7 377 aa7.41□□□□□ -1.22
PTPRM-203ENST00000400060 B4DSR2 109 aa7.4□□□□□ -1.22
PTPRM-203ENST00000400060 RNASE3P12724 160 aaKnown RBP7.4□□□□□ -1.22
PTPRM-203ENST00000400060 CXCL6P80162 114 aa7.4□□□□□ -1.22
PTPRM-203ENST00000400060 CREBBPQ92793 2442 aa7.4□□□□□ -1.22
PTPRM-203ENST00000400060 HCFC1P51610 2035 aa7.4□□□□□ -1.23
PTPRM-203ENST00000400060 BPY2O14599 106 aa7.4□□□□□ -1.23
PTPRM-203ENST00000400060 SMIM11BQ8TCY0 68 aa7.4□□□□□ -1.23
PTPRM-203ENST00000400060 H3BUX3 64 aa7.39□□□□□ -1.23
PTPRM-203ENST00000400060 BRI3O95415 125 aa7.39□□□□□ -1.23
PTPRM-203ENST00000400060 Q8N9W7 124 aa7.39□□□□□ -1.23
PTPRM-203ENST00000400060 DIRC1Q969H9 104 aa7.39□□□□□ -1.23
PTPRM-203ENST00000400060 BPESC1Q9GZL8 116 aa7.39□□□□□ -1.23
PTPRM-203ENST00000400060 UBE2D4Q9Y2X8 147 aa7.39□□□□□ -1.23
PTPRM-203ENST00000400060 FREM1Q5H8C1 2179 aa7.39□□□□□ -1.23
PTPRM-203ENST00000400060 DEFB131AP59861 70 aa7.39□□□□□ -1.23
PTPRM-203ENST00000400060 SPTSSBQ8NFR3 76 aa7.38□□□□□ -1.23
PTPRM-203ENST00000400060 LINC00846Q9NV44 126 aa7.38□□□□□ -1.23
PTPRM-203ENST00000400060 GOLGB1Q14789 3259 aaKnown RBP7.38□□□□□ -1.23
PTPRM-203ENST00000400060 TTC28Q96AY4 2481 aa7.38□□□□□ -1.23
PTPRM-203ENST00000400060 LY6LH3BQJ8 138 aa7.38□□□□□ -1.23
PTPRM-203ENST00000400060 CD164Q04900 197 aa7.38□□□□□ -1.23
PTPRM-203ENST00000400060 CACNA1BQ00975 2339 aa7.37□□□□□ -1.23
PTPRM-203ENST00000400060 TMEM89A2RUT3 159 aa7.37□□□□□ -1.23
PTPRM-203ENST00000400060 KLLNB2CW77 178 aa7.37□□□□□ -1.23
PTPRM-203ENST00000400060 A0A1W2PRX2 142 aa7.37□□□□□ -1.23
PTPRM-203ENST00000400060 TNFRSF13BO14836 293 aaPredicted RBP7.37□□□□□ -1.23
PTPRM-203ENST00000400060 ADAMTSL4-AS1Q5T5F5 129 aa7.37□□□□□ -1.23
PTPRM-203ENST00000400060 BRD3OSQ6XYD6 125 aa7.37□□□□□ -1.23
PTPRM-203ENST00000400060 LINC00467Q9BRT7 94 aa7.37□□□□□ -1.23
PTPRM-203ENST00000400060 A0A1W2PNU3 283 aaPredicted RBP7.37□□□□□ -1.23
PTPRM-203ENST00000400060 ODF3BA8MYP8 253 aa7.37□□□□□ -1.23
PTPRM-203ENST00000400060 CCDC140Q96MF4 163 aa7.36□□□□□ -1.23
PTPRM-203ENST00000400060 IGHV3-53P01767 116 aa7.36□□□□□ -1.23
PTPRM-203ENST00000400060 CFHR3Q02985 330 aa7.36□□□□□ -1.23
PTPRM-203ENST00000400060 MED13Q9UHV7 2174 aa7.36□□□□□ -1.23
PTPRM-203ENST00000400060 ZGRF1Q86YA3 2104 aa7.36□□□□□ -1.23
PTPRM-203ENST00000400060 LRP4O75096 1905 aa7.36□□□□□ -1.23
PTPRM-203ENST00000400060 LINC01548A6NM66 108 aa7.36□□□□□ -1.23
PTPRM-203ENST00000400060 SIRPDQ9H106 197 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms