RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 B5MCH6 92 aa8.38□□□□□ -1.07
SKA3-203ENST00000400018 RIGQ13278 110 aa8.38□□□□□ -1.07
SKA3-203ENST00000400018 C9orf85Q96MD7 179 aa8.38□□□□□ -1.07
SKA3-203ENST00000400018 DNAH9Q9NYC9 4486 aa8.38□□□□□ -1.07
SKA3-203ENST00000400018 WIPF1O43516 503 aa8.38□□□□□ -1.07
SKA3-203ENST00000400018 NPYP01303 97 aa8.38□□□□□ -1.07
SKA3-203ENST00000400018 OR5AL1P0C617 328 aa8.38□□□□□ -1.07
SKA3-203ENST00000400018 SMIM20Q8N5G0 67 aa8.38□□□□□ -1.07
SKA3-203ENST00000400018 C18orf15Q96N68 181 aa8.38□□□□□ -1.07
SKA3-203ENST00000400018 MAP1LC3CQ9BXW4 147 aa8.38□□□□□ -1.07
SKA3-203ENST00000400018 RRN3P1Q2M238 152 aa8.38□□□□□ -1.07
SKA3-203ENST00000400018 SIVA1O15304 175 aa8.37□□□□□ -1.07
SKA3-203ENST00000400018 SPINK8P0C7L1 97 aa8.37□□□□□ -1.07
SKA3-203ENST00000400018 FGF6P10767 208 aa8.37□□□□□ -1.07
SKA3-203ENST00000400018 C20orf78Q9BR46 151 aa8.37□□□□□ -1.07
SKA3-203ENST00000400018 FAM104BQ5XKR9 115 aa8.37□□□□□ -1.07
SKA3-203ENST00000400018 BOD1L2Q8IYS8 172 aa8.37□□□□□ -1.07
SKA3-203ENST00000400018 IGHV4-28A0A0C4DH34 117 aa8.36□□□□□ -1.07
SKA3-203ENST00000400018 LOC100131303A0A0U1RQF7 123 aa8.36□□□□□ -1.07
SKA3-203ENST00000400018 ZNF56Q15929 161 aa8.36□□□□□ -1.07
SKA3-203ENST00000400018 HSPB8Q9UJY1 196 aa8.36□□□□□ -1.07
SKA3-203ENST00000400018 CRYGDP07320 174 aa8.36□□□□□ -1.07
SKA3-203ENST00000400018 CKS2P33552 79 aa8.36□□□□□ -1.07
SKA3-203ENST00000400018 GATD1Q8NB37 220 aa8.36□□□□□ -1.07
SKA3-203ENST00000400018 ERG28Q9UKR5 140 aa8.36□□□□□ -1.07
SKA3-203ENST00000400018 MT-ATP8P03928 68 aa8.35□□□□□ -1.07
SKA3-203ENST00000400018 HTN3P15516 51 aa8.35□□□□□ -1.07
SKA3-203ENST00000400018 LINC00315P59091 139 aa8.35□□□□□ -1.07
SKA3-203ENST00000400018 FBN3Q75N90 2809 aa8.35□□□□□ -1.07
SKA3-203ENST00000400018 IGHV3-38A0A0C4DH36 116 aa8.35□□□□□ -1.07
SKA3-203ENST00000400018 IFI27P40305 119 aaPredicted RBP8.35□□□□□ -1.07
SKA3-203ENST00000400018 TRGV11A0A075B6L2 103 aa8.34□□□□□ -1.07
SKA3-203ENST00000400018 A0A096LPF7 62 aa8.34□□□□□ -1.07
SKA3-203ENST00000400018 K7ERJ3 54 aa8.34□□□□□ -1.07
SKA3-203ENST00000400018 ZNF415Q09FC8 603 aa8.34□□□□□ -1.07
SKA3-203ENST00000400018 GAGE5Q13069 117 aa8.34□□□□□ -1.07
SKA3-203ENST00000400018 GAGE6Q13070 117 aa8.34□□□□□ -1.07
SKA3-203ENST00000400018 FAM222AQ5U5X8 452 aa8.34□□□□□ -1.07
SKA3-203ENST00000400018 CNFNQ9BYD5 112 aa8.34□□□□□ -1.07
SKA3-203ENST00000400018 KIF25-AS1Q9Y6Z4 181 aa8.34□□□□□ -1.07
SKA3-203ENST00000400018 H3BMG7 143 aa8.34□□□□□ -1.07
SKA3-203ENST00000400018 RPL32P62910 135 aaKnown RBP8.34□□□□□ -1.07
SKA3-203ENST00000400018 LINC01545Q5VT33 79 aa8.34□□□□□ -1.07
SKA3-203ENST00000400018 SUMO4Q6EEV6 95 aa8.34□□□□□ -1.07
SKA3-203ENST00000400018 ATP5L2Q7Z4Y8 100 aa8.34□□□□□ -1.07
SKA3-203ENST00000400018 OVOL2Q9BRP0 275 aa8.34□□□□□ -1.07
SKA3-203ENST00000400018 TRGV2A0A075B6R0 118 aa8.33□□□□□ -1.08
SKA3-203ENST00000400018 CMC4P56277 68 aaPredicted RBP8.33□□□□□ -1.08
SKA3-203ENST00000400018 TMEM263Q8WUH6 116 aaKnown RBP8.33□□□□□ -1.08
SKA3-203ENST00000400018 ANAPC13Q9BS18 74 aa8.33□□□□□ -1.08
SKA3-203ENST00000400018 K7EMI3 77 aa8.33□□□□□ -1.08
SKA3-203ENST00000400018 SMIM13P0DJ93 91 aa8.33□□□□□ -1.08
SKA3-203ENST00000400018 CFAP126Q5VTH2 177 aa8.33□□□□□ -1.08
SKA3-203ENST00000400018 PRELID3AQ96N28 172 aa8.33□□□□□ -1.08
SKA3-203ENST00000400018 F8W1H4 67 aa8.32□□□□□ -1.08
SKA3-203ENST00000400018 M0R2P5 195 aa8.32□□□□□ -1.08
SKA3-203ENST00000400018 MORN3Q6PF18 240 aaPredicted RBP8.32□□□□□ -1.08
SKA3-203ENST00000400018 SYT8Q8NBV8 401 aa8.32□□□□□ -1.08
SKA3-203ENST00000400018 PHLDA1Q8WV24 401 aaPredicted RBP8.32□□□□□ -1.08
SKA3-203ENST00000400018 RASL10AQ92737 203 aa8.32□□□□□ -1.08
SKA3-203ENST00000400018 C1QTNF4Q9BXJ3 329 aa8.32□□□□□ -1.08
SKA3-203ENST00000400018 TNFRSF18Q9Y5U5 241 aa8.32□□□□□ -1.08
SKA3-203ENST00000400018 GCSHP23434 173 aa8.32□□□□□ -1.08
SKA3-203ENST00000400018 APOC4P55056 127 aa8.32□□□□□ -1.08
SKA3-203ENST00000400018 RASL11AQ6T310 242 aa8.32□□□□□ -1.08
SKA3-203ENST00000400018 CHCHD1Q96BP2 118 aaKnown RBP8.32□□□□□ -1.08
SKA3-203ENST00000400018 CYSLTR1Q9Y271 337 aa8.32□□□□□ -1.08
SKA3-203ENST00000400018 A0A0J9YY99 117 aa8.31□□□□□ -1.08
SKA3-203ENST00000400018 FXYD2P54710 66 aa8.31□□□□□ -1.08
SKA3-203ENST00000400018 ZNF493Q6ZR52 646 aa8.31□□□□□ -1.08
SKA3-203ENST00000400018 CDIP1Q9H305 208 aa8.31□□□□□ -1.08
SKA3-203ENST00000400018 TNFRSF6BO95407 300 aa8.31□□□□□ -1.08
SKA3-203ENST00000400018 PCP2Q8IVA1 136 aa8.31□□□□□ -1.08
SKA3-203ENST00000400018 Q8NAQ8 132 aa8.31□□□□□ -1.08
SKA3-203ENST00000400018 DPH3P1Q9H4G8 78 aa8.31□□□□□ -1.08
SKA3-203ENST00000400018 XGP55808 180 aa8.31□□□□□ -1.08
SKA3-203ENST00000400018 A0A0J9YWU9 116 aa8.3□□□□□ -1.08
SKA3-203ENST00000400018 ORMDL3Q8N138 153 aa8.3□□□□□ -1.08
SKA3-203ENST00000400018 NRACQ8N912 160 aa8.3□□□□□ -1.08
SKA3-203ENST00000400018 IGHV4-4A0A075B6R2 117 aa8.3□□□□□ -1.08
SKA3-203ENST00000400018 NMUP48645 174 aa8.3□□□□□ -1.08
SKA3-203ENST00000400018 CACNG7P62955 275 aa8.29□□□□□ -1.08
SKA3-203ENST00000400018 IL17DQ8TAD2 202 aa8.29□□□□□ -1.08
SKA3-203ENST00000400018 TM2D2Q9BX73 214 aa8.29□□□□□ -1.08
SKA3-203ENST00000400018 NXPH4O95158 308 aa8.29□□□□□ -1.08
SKA3-203ENST00000400018 Q6ZUT4 128 aa8.29□□□□□ -1.08
SKA3-203ENST00000400018 C16orf74Q96GX8 76 aa8.29□□□□□ -1.08
SKA3-203ENST00000400018 NHP2Q9NX24 153 aaKnown RBP8.28□□□□□ -1.08
SKA3-203ENST00000400018 A0A1B0GWB2 263 aa8.28□□□□□ -1.08
SKA3-203ENST00000400018 APOMO95445 188 aa8.28□□□□□ -1.08
SKA3-203ENST00000400018 NANOS2P60321 138 aaKnown RBP8.28□□□□□ -1.08
SKA3-203ENST00000400018 PRSS3P2Q8NHM4 247 aa8.28□□□□□ -1.08
SKA3-203ENST00000400018 DNAH7Q8WXX0 4024 aa8.27□□□□□ -1.08
SKA3-203ENST00000400018 GAGE12JA6NER3 117 aa8.27□□□□□ -1.09
SKA3-203ENST00000400018 GAGE4Q13068 117 aa8.27□□□□□ -1.09
SKA3-203ENST00000400018 GAGE13Q4V321 117 aa8.27□□□□□ -1.09
SKA3-203ENST00000400018 SLC25A29Q8N8R3 303 aa8.27□□□□□ -1.09
SKA3-203ENST00000400018 KIR2DL5BQ8NHK3 375 aa8.27□□□□□ -1.09
SKA3-203ENST00000400018 M0QY20 66 aa8.27□□□□□ -1.09
SKA3-203ENST00000400018 ZC2HC1BQ5TFG8 222 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms