RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 LINC00269Q8N2A0 174 aa8.41□□□□□ -1.06
CACNA1C-216ENST00000399638 CYYR1Q96J86 154 aa8.41□□□□□ -1.06
CACNA1C-216ENST00000399638 LINC01620Q4KN68 170 aa8.41□□□□□ -1.06
CACNA1C-216ENST00000399638 TMEM14CQ9P0S9 112 aa8.4□□□□□ -1.06
CACNA1C-216ENST00000399638 IGLC1P0CG04 106 aa8.4□□□□□ -1.06
CACNA1C-216ENST00000399638 Q8N1Y9 231 aa8.4□□□□□ -1.06
CACNA1C-216ENST00000399638 BPY2O14599 106 aa8.4□□□□□ -1.07
CACNA1C-216ENST00000399638 RSPO1Q2MKA7 263 aaPredicted RBP8.4□□□□□ -1.07
CACNA1C-216ENST00000399638 ATOX1O00244 68 aa8.39□□□□□ -1.07
CACNA1C-216ENST00000399638 IGLV2-11P01706 119 aa8.39□□□□□ -1.07
CACNA1C-216ENST00000399638 CFC1BP0CG36 223 aa8.39□□□□□ -1.07
CACNA1C-216ENST00000399638 CFC1P0CG37 223 aa8.39□□□□□ -1.07
CACNA1C-216ENST00000399638 IGFL2Q6UWQ7 119 aa8.39□□□□□ -1.07
CACNA1C-216ENST00000399638 LYRM9A8MSI8 78 aa8.39□□□□□ -1.07
CACNA1C-216ENST00000399638 C16orf54Q6UWD8 224 aa8.39□□□□□ -1.07
CACNA1C-216ENST00000399638 Q8NA96 180 aa8.39□□□□□ -1.07
CACNA1C-216ENST00000399638 AGPAT4-IT1Q9H0P7 198 aa8.39□□□□□ -1.07
CACNA1C-216ENST00000399638 ANAPC1Q9H1A4 1944 aa8.39□□□□□ -1.07
CACNA1C-216ENST00000399638 RPL39LQ96EH5 51 aaKnown RBP8.39□□□□□ -1.07
CACNA1C-216ENST00000399638 OTOGLQ3ZCN5 2332 aa8.39□□□□□ -1.07
CACNA1C-216ENST00000399638 A6NDX4 124 aa8.38□□□□□ -1.07
CACNA1C-216ENST00000399638 NPYP01303 97 aa8.38□□□□□ -1.07
CACNA1C-216ENST00000399638 ZNF706Q9Y5V0 76 aaPredicted RBP8.38□□□□□ -1.07
CACNA1C-216ENST00000399638 REG3AQ06141 175 aa8.38□□□□□ -1.07
CACNA1C-216ENST00000399638 RNASE8Q8TDE3 154 aaKnown RBP8.38□□□□□ -1.07
CACNA1C-216ENST00000399638 RITA1Q96K30 269 aa8.38□□□□□ -1.07
CACNA1C-216ENST00000399638 ADAMTS9Q9P2N4 1935 aa8.38□□□□□ -1.07
CACNA1C-216ENST00000399638 LINC00322Q6ZN03 302 aaPredicted RBP8.38□□□□□ -1.07
CACNA1C-216ENST00000399638 C15orf65H3BRN8 121 aa8.38□□□□□ -1.07
CACNA1C-216ENST00000399638 CXCL5P42830 114 aa8.38□□□□□ -1.07
CACNA1C-216ENST00000399638 NDUFC2-KCTD14E9PQ53 114 aa8.38□□□□□ -1.07
CACNA1C-216ENST00000399638 ENHOQ6UWT2 76 aa8.38□□□□□ -1.07
CACNA1C-216ENST00000399638 FGF23Q9GZV9 251 aaPredicted RBP8.38□□□□□ -1.07
CACNA1C-216ENST00000399638 SPANXCQ9NY87 97 aa8.38□□□□□ -1.07
CACNA1C-216ENST00000399638 C20orf197Q8N268 126 aa8.37□□□□□ -1.07
CACNA1C-216ENST00000399638 C20orf78Q9BR46 151 aa8.37□□□□□ -1.07
CACNA1C-216ENST00000399638 IGHV1-58A0A0C4DH39 117 aa8.37□□□□□ -1.07
CACNA1C-216ENST00000399638 NCOR2Q9Y618 2525 aa8.37□□□□□ -1.07
CACNA1C-216ENST00000399638 TIMM17BO60830 172 aa8.37□□□□□ -1.07
CACNA1C-216ENST00000399638 ZNF524Q96C55 264 aa8.37□□□□□ -1.07
CACNA1C-216ENST00000399638 MIFP14174 115 aa8.37□□□□□ -1.07
CACNA1C-216ENST00000399638 COX7BP24311 80 aa8.37□□□□□ -1.07
CACNA1C-216ENST00000399638 LGALS9O00182 355 aa8.36□□□□□ -1.07
CACNA1C-216ENST00000399638 DYSFO75923 2080 aa8.36□□□□□ -1.07
CACNA1C-216ENST00000399638 NACAE9PAV3 2078 aa8.36□□□□□ -1.07
CACNA1C-216ENST00000399638 Q6ZSV7 163 aa8.36□□□□□ -1.07
CACNA1C-216ENST00000399638 C1orf158Q8N1D5 194 aa8.35□□□□□ -1.07
CACNA1C-216ENST00000399638 A4D1N5 150 aa8.35□□□□□ -1.07
CACNA1C-216ENST00000399638 JMJD7-PLA2G4BH0Y9G9 81 aa8.35□□□□□ -1.07
CACNA1C-216ENST00000399638 TNFRSF13BO14836 293 aaPredicted RBP8.35□□□□□ -1.07
CACNA1C-216ENST00000399638 C1orf195Q5TG92 126 aa8.35□□□□□ -1.07
CACNA1C-216ENST00000399638 MED13Q9UHV7 2174 aa8.35□□□□□ -1.07
CACNA1C-216ENST00000399638 SMIM9A6NGZ8 99 aa8.35□□□□□ -1.07
CACNA1C-216ENST00000399638 DEFB1P60022 68 aa8.35□□□□□ -1.07
CACNA1C-216ENST00000399638 LINC00337Q8N6G1 96 aa8.35□□□□□ -1.07
CACNA1C-216ENST00000399638 KIF26AQ9ULI4 1882 aaPredicted RBP8.34□□□□□ -1.07
CACNA1C-216ENST00000399638 K7EN84 100 aa8.34□□□□□ -1.07
CACNA1C-216ENST00000399638 PRLHP81277 87 aa8.34□□□□□ -1.07
CACNA1C-216ENST00000399638 J3QL48 77 aa8.34□□□□□ -1.07
CACNA1C-216ENST00000399638 K7EMT4 169 aa8.34□□□□□ -1.07
CACNA1C-216ENST00000399638 SPINT4Q6UDR6 99 aa8.34□□□□□ -1.07
CACNA1C-216ENST00000399638 HIVEP3Q5T1R4 2406 aa8.34□□□□□ -1.07
CACNA1C-216ENST00000399638 LINC01545Q5VT33 79 aa8.34□□□□□ -1.07
CACNA1C-216ENST00000399638 H3BQ85 93 aa8.33□□□□□ -1.08
CACNA1C-216ENST00000399638 RBX1P62877 108 aa8.33□□□□□ -1.08
CACNA1C-216ENST00000399638 SPATA12Q7Z6I5 190 aa8.33□□□□□ -1.08
CACNA1C-216ENST00000399638 F8VRH5 84 aa8.33□□□□□ -1.08
CACNA1C-216ENST00000399638 CTRLP40313 264 aa8.33□□□□□ -1.08
CACNA1C-216ENST00000399638 C1orf134Q5TEV5 83 aa8.33□□□□□ -1.08
CACNA1C-216ENST00000399638 NUPR1O60356 82 aa8.33□□□□□ -1.08
CACNA1C-216ENST00000399638 HIGD1BQ9P298 99 aa8.33□□□□□ -1.08
CACNA1C-216ENST00000399638 EP400Q96L91 3159 aa8.33□□□□□ -1.08
CACNA1C-216ENST00000399638 PIK3CD-AS1Q5SR53 167 aa8.33□□□□□ -1.08
CACNA1C-216ENST00000399638 IGKV2-28A0A075B6P5 120 aa8.32□□□□□ -1.08
CACNA1C-216ENST00000399638 PLAC8L1A1L4L8 177 aa8.32□□□□□ -1.08
CACNA1C-216ENST00000399638 IGKV2D-28P01615 120 aa8.32□□□□□ -1.08
CACNA1C-216ENST00000399638 KPRPQ5T749 579 aaPredicted RBP8.32□□□□□ -1.08
CACNA1C-216ENST00000399638 CIRBP-AS1Q8TBR5 109 aa8.32□□□□□ -1.08
CACNA1C-216ENST00000399638 TRBV27A0A0K0K1C4 114 aa8.32□□□□□ -1.08
CACNA1C-216ENST00000399638 Q8N7P7 452 aa8.32□□□□□ -1.08
CACNA1C-216ENST00000399638 FXYD5Q96DB9 178 aa8.32□□□□□ -1.08
CACNA1C-216ENST00000399638 MED14OSP0DP75 135 aa8.32□□□□□ -1.08
CACNA1C-216ENST00000399638 Q6ZTI0 123 aa8.32□□□□□ -1.08
CACNA1C-216ENST00000399638 RPL37AP8A6NKH3 93 aa8.31□□□□□ -1.08
CACNA1C-216ENST00000399638 BEAN1Q3B7T3 259 aa8.31□□□□□ -1.08
CACNA1C-216ENST00000399638 Q8N9L7 120 aa8.31□□□□□ -1.08
CACNA1C-216ENST00000399638 CHCHD10Q8WYQ3 142 aaPredicted RBP8.31□□□□□ -1.08
CACNA1C-216ENST00000399638 CSDC2Q9Y534 153 aaKnown RBP8.31□□□□□ -1.08
CACNA1C-216ENST00000399638 HELZP42694 1942 aaKnown RBP8.31□□□□□ -1.08
CACNA1C-216ENST00000399638 P0C879 139 aa8.31□□□□□ -1.08
CACNA1C-216ENST00000399638 ZNF747Q9BV97 191 aa8.31□□□□□ -1.08
CACNA1C-216ENST00000399638 IGLV11-55A0A075B6I3 123 aa8.31□□□□□ -1.08
CACNA1C-216ENST00000399638 RPL39P62891 51 aaKnown RBP8.3□□□□□ -1.08
CACNA1C-216ENST00000399638 Q6ZUT4 128 aa8.3□□□□□ -1.08
CACNA1C-216ENST00000399638 LENEPQ9Y5L5 61 aa8.3□□□□□ -1.08
CACNA1C-216ENST00000399638 MIR7-3HGQ8N6C7 128 aa8.3□□□□□ -1.08
CACNA1C-216ENST00000399638 DOCK11Q5JSL3 2073 aa8.3□□□□□ -1.08
CACNA1C-216ENST00000399638 SOSTDC1Q6X4U4 206 aa8.3□□□□□ -1.08
CACNA1C-216ENST00000399638 HEATR5AQ86XA9 2040 aa8.3□□□□□ -1.08
CACNA1C-216ENST00000399638 TRBV6-1A0A0K0K1D8 114 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms