RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 ZMAT4Q9H898 229 aa11.04□□□□□ -0.64
RPRD1A-202ENST00000399022 CELSR3Q9NYQ7 3312 aa11.03□□□□□ -0.64
RPRD1A-202ENST00000399022 HTN3P15516 51 aa11.03□□□□□ -0.64
RPRD1A-202ENST00000399022 RBMY1FQ15415 496 aaKnown RBP11.03□□□□□ -0.64
RPRD1A-202ENST00000399022 CEMP1Q6PRD7 247 aaPredicted RBP11.03□□□□□ -0.64
RPRD1A-202ENST00000399022 C20orf203Q8NBC4 194 aa11.03□□□□□ -0.64
RPRD1A-202ENST00000399022 JMJD1CQ15652 2540 aa11.02□□□□□ -0.64
RPRD1A-202ENST00000399022 HERVK_113P63121 156 aa11.02□□□□□ -0.64
RPRD1A-202ENST00000399022 SMAD5-AS1Q9Y6J3 95 aa11.02□□□□□ -0.64
RPRD1A-202ENST00000399022 LINC01619G3V211 115 aa11.02□□□□□ -0.65
RPRD1A-202ENST00000399022 CRIP2P52943 208 aaPredicted RBP11.02□□□□□ -0.65
RPRD1A-202ENST00000399022 UBE2D1P51668 147 aa11.02□□□□□ -0.65
RPRD1A-202ENST00000399022 FSTL3O95633 263 aa11.01□□□□□ -0.65
RPRD1A-202ENST00000399022 P0DMU3 169 aa11.01□□□□□ -0.65
RPRD1A-202ENST00000399022 FAM231AP0DMU4 169 aa11.01□□□□□ -0.65
RPRD1A-202ENST00000399022 FAM231CP0DMU5 169 aa11.01□□□□□ -0.65
RPRD1A-202ENST00000399022 MALP21145 153 aa11.01□□□□□ -0.65
RPRD1A-202ENST00000399022 MTORP42345 2549 aa11.01□□□□□ -0.65
RPRD1A-202ENST00000399022 TNFRSF13BO14836 293 aaPredicted RBP11□□□□□ -0.65
RPRD1A-202ENST00000399022 NXPH4O95158 308 aa11□□□□□ -0.65
RPRD1A-202ENST00000399022 SHISA2Q6UWI4 295 aa11□□□□□ -0.65
RPRD1A-202ENST00000399022 PCSK5Q92824 1860 aa11□□□□□ -0.65
RPRD1A-202ENST00000399022 IGHV1-58A0A0C4DH39 117 aa11□□□□□ -0.65
RPRD1A-202ENST00000399022 Q9HAA7 133 aa11□□□□□ -0.65
RPRD1A-202ENST00000399022 INSP01308 110 aa11□□□□□ -0.65
RPRD1A-202ENST00000399022 MGAQ8IWI9 3026 aa11□□□□□ -0.65
RPRD1A-202ENST00000399022 ZNF22P17026 224 aaPredicted RBP11□□□□□ -0.65
RPRD1A-202ENST00000399022 C5orf47Q569G3 176 aa11□□□□□ -0.65
RPRD1A-202ENST00000399022 C3orf22Q8N5N4 141 aa11□□□□□ -0.65
RPRD1A-202ENST00000399022 PRRC2AP48634 2157 aaKnown RBP10.99□□□□□ -0.65
RPRD1A-202ENST00000399022 C11orf71Q6IPW1 123 aa10.99□□□□□ -0.65
RPRD1A-202ENST00000399022 RBM3P98179 157 aaKnown RBP10.99□□□□□ -0.65
RPRD1A-202ENST00000399022 CFHR3Q02985 330 aa10.99□□□□□ -0.65
RPRD1A-202ENST00000399022 TRBV30A0A0K0K1B3 111 aa10.99□□□□□ -0.65
RPRD1A-202ENST00000399022 hADV29S1A0JD25 119 aa10.99□□□□□ -0.65
RPRD1A-202ENST00000399022 H3BUA1 57 aa10.99□□□□□ -0.65
RPRD1A-202ENST00000399022 M0QXV9 152 aa10.99□□□□□ -0.65
RPRD1A-202ENST00000399022 UBE2D3P61077 147 aa10.99□□□□□ -0.65
RPRD1A-202ENST00000399022 UBE2D2P62837 147 aa10.99□□□□□ -0.65
RPRD1A-202ENST00000399022 MIAQ16674 131 aa10.99□□□□□ -0.65
RPRD1A-202ENST00000399022 TMEM243Q9BU79 118 aa10.99□□□□□ -0.65
RPRD1A-202ENST00000399022 MDFICQ9P1T7 246 aa10.99□□□□□ -0.65
RPRD1A-202ENST00000399022 SPEGQ15772 3267 aa10.99□□□□□ -0.65
RPRD1A-202ENST00000399022 VPREB3Q9UKI3 123 aa10.98□□□□□ -0.65
RPRD1A-202ENST00000399022 FN1P02751 2386 aaKnown RBP10.98□□□□□ -0.65
RPRD1A-202ENST00000399022 SLURP1P55000 103 aa10.98□□□□□ -0.65
RPRD1A-202ENST00000399022 MED14OSP0DP75 135 aa10.98□□□□□ -0.65
RPRD1A-202ENST00000399022 DAZ2Q13117 558 aaKnown RBP10.98□□□□□ -0.65
RPRD1A-202ENST00000399022 DAZ4Q86SG3 579 aaKnown RBP10.98□□□□□ -0.65
RPRD1A-202ENST00000399022 CNFNQ9BYD5 112 aa10.98□□□□□ -0.65
RPRD1A-202ENST00000399022 DAZ3Q9NR90 486 aaKnown RBP10.98□□□□□ -0.65
RPRD1A-202ENST00000399022 IGHG2P01859 326 aa10.98□□□□□ -0.65
RPRD1A-202ENST00000399022 CRLF1O75462 422 aa10.97□□□□□ -0.65
RPRD1A-202ENST00000399022 NDUFA7O95182 113 aa10.97□□□□□ -0.65
RPRD1A-202ENST00000399022 ELANEP08246 267 aa10.97□□□□□ -0.65
RPRD1A-202ENST00000399022 SDIM1Q6ZPB5 146 aa10.97□□□□□ -0.65
RPRD1A-202ENST00000399022 TMEM223A0PJW6 202 aa10.96□□□□□ -0.65
RPRD1A-202ENST00000399022 ATP5G1P05496 136 aa10.96□□□□□ -0.65
RPRD1A-202ENST00000399022 SND1-IT1Q9HBX3 110 aa10.96□□□□□ -0.65
RPRD1A-202ENST00000399022 J3QLI3 93 aa10.95□□□□□ -0.66
RPRD1A-202ENST00000399022 APRG1Q8IVJ8 170 aa10.95□□□□□ -0.66
RPRD1A-202ENST00000399022 LINC00694P0DN24 101 aa10.95□□□□□ -0.66
RPRD1A-202ENST00000399022 EBI3Q14213 229 aa10.95□□□□□ -0.66
RPRD1A-202ENST00000399022 C14orf132Q9NPU4 83 aa10.95□□□□□ -0.66
RPRD1A-202ENST00000399022 ZNF462Q96JM2 2506 aa10.95□□□□□ -0.66
RPRD1A-202ENST00000399022 DEFB130BP0DP73 79 aa10.95□□□□□ -0.66
RPRD1A-202ENST00000399022 DEFB130AP0DP74 79 aa10.95□□□□□ -0.66
RPRD1A-202ENST00000399022 ZFAND3Q9H8U3 227 aa10.95□□□□□ -0.66
RPRD1A-202ENST00000399022 SMCPP49901 116 aaPredicted RBP10.94□□□□□ -0.66
RPRD1A-202ENST00000399022 Q6Q795 121 aa10.94□□□□□ -0.66
RPRD1A-202ENST00000399022 MRAPQ8TCY5 172 aa10.94□□□□□ -0.66
RPRD1A-202ENST00000399022 IGHV4OR15-8A0A075B7B6 117 aa10.94□□□□□ -0.66
RPRD1A-202ENST00000399022 A0A087WW49 117 aa10.94□□□□□ -0.66
RPRD1A-202ENST00000399022 A0A1W2PPR1 153 aa10.94□□□□□ -0.66
RPRD1A-202ENST00000399022 LECT2O14960 151 aa10.94□□□□□ -0.66
RPRD1A-202ENST00000399022 FAM110AQ9BQ89 295 aa10.94□□□□□ -0.66
RPRD1A-202ENST00000399022 GHRHP01286 108 aa10.93□□□□□ -0.66
RPRD1A-202ENST00000399022 ZFAND2AQ8N6M9 145 aa10.93□□□□□ -0.66
RPRD1A-202ENST00000399022 VSIG2Q96IQ7 327 aa10.93□□□□□ -0.66
RPRD1A-202ENST00000399022 ORMDL1Q9P0S3 153 aa10.93□□□□□ -0.66
RPRD1A-202ENST00000399022 PRO0461Q9UI25 63 aa10.93□□□□□ -0.66
RPRD1A-202ENST00000399022 PKD1L2Q7Z442 2459 aa10.93□□□□□ -0.66
RPRD1A-202ENST00000399022 A8MZ25 164 aa10.93□□□□□ -0.66
RPRD1A-202ENST00000399022 COX7A2LO14548 114 aa10.93□□□□□ -0.66
RPRD1A-202ENST00000399022 TMEM263Q8WUH6 116 aaKnown RBP10.93□□□□□ -0.66
RPRD1A-202ENST00000399022 H7C423 109 aa10.93□□□□□ -0.66
RPRD1A-202ENST00000399022 PRR9Q5T870 116 aa10.93□□□□□ -0.66
RPRD1A-202ENST00000399022 RAI1Q7Z5J4 1906 aaPredicted RBP10.93□□□□□ -0.66
RPRD1A-202ENST00000399022 EPG5Q9HCE0 2579 aa10.92□□□□□ -0.66
RPRD1A-202ENST00000399022 A6NDX4 124 aa10.92□□□□□ -0.66
RPRD1A-202ENST00000399022 IGLV4-3A0A075B6K6 122 aa10.92□□□□□ -0.66
RPRD1A-202ENST00000399022 C20orf173Q96LM9 149 aa10.92□□□□□ -0.66
RPRD1A-202ENST00000399022 C10orf99Q6UWK7 81 aa10.91□□□□□ -0.66
RPRD1A-202ENST00000399022 H0YGX0 51 aa10.91□□□□□ -0.66
RPRD1A-202ENST00000399022 Q8N6K4 173 aa10.91□□□□□ -0.66
RPRD1A-202ENST00000399022 EYSQ5T1H1 3165 aa10.91□□□□□ -0.66
RPRD1A-202ENST00000399022 CDKN2A-AS1Q9UH64 79 aa10.91□□□□□ -0.66
RPRD1A-202ENST00000399022 TSPEAR-AS2P59090 65 aa10.9□□□□□ -0.66
RPRD1A-202ENST00000399022 LST1O00453 97 aa10.9□□□□□ -0.66
RPRD1A-202ENST00000399022 IGLV2-18A0A075B6J9 118 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms