RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 TMEM262E9PQX1 116 aa13.51□□□□□ -0.25
CHRFAM7A-202ENST00000397827 TRAV4A0A0B4J268 109 aa13.51□□□□□ -0.25
CHRFAM7A-202ENST00000397827 IFITM1P13164 125 aa13.51□□□□□ -0.25
CHRFAM7A-202ENST00000397827 PRADC1Q9BSG0 188 aa13.51□□□□□ -0.25
CHRFAM7A-202ENST00000397827 TRBV27A0A0K0K1C4 114 aa13.5□□□□□ -0.25
CHRFAM7A-202ENST00000397827 MYMXA0A1B0GTQ4 84 aa13.5□□□□□ -0.25
CHRFAM7A-202ENST00000397827 SNCGO76070 127 aa13.5□□□□□ -0.25
CHRFAM7A-202ENST00000397827 WNK1Q9H4A3 2382 aa13.49□□□□□ -0.25
CHRFAM7A-202ENST00000397827 C11orf86A6NJI1 115 aa13.49□□□□□ -0.25
CHRFAM7A-202ENST00000397827 PPDPFQ9H3Y8 114 aa13.49□□□□□ -0.25
CHRFAM7A-202ENST00000397827 IGLV4-69A0A075B6H9 119 aa13.49□□□□□ -0.25
CHRFAM7A-202ENST00000397827 TMEM61Q8N0U2 210 aa13.49□□□□□ -0.25
CHRFAM7A-202ENST00000397827 TRBV6-5A0A0K0K1A5 114 aa13.49□□□□□ -0.25
CHRFAM7A-202ENST00000397827 LINC01619G3V211 115 aa13.49□□□□□ -0.25
CHRFAM7A-202ENST00000397827 CRLF1O75462 422 aa13.49□□□□□ -0.25
CHRFAM7A-202ENST00000397827 A8MWV9 139 aa13.48□□□□□ -0.25
CHRFAM7A-202ENST00000397827 KRTAP1-3Q8IUG1 177 aa13.48□□□□□ -0.25
CHRFAM7A-202ENST00000397827 ANKRD29Q8N6D5 301 aa13.48□□□□□ -0.25
CHRFAM7A-202ENST00000397827 SETD2Q9BYW2 2564 aaPredicted RBP13.48□□□□□ -0.25
CHRFAM7A-202ENST00000397827 IGHV3-73A0A0B4J1V6 119 aa13.48□□□□□ -0.25
CHRFAM7A-202ENST00000397827 KLHL30-AS1Q8NEE0 82 aa13.48□□□□□ -0.25
CHRFAM7A-202ENST00000397827 PMVKQ15126 192 aa13.47□□□□□ -0.25
CHRFAM7A-202ENST00000397827 Q8N2B8 174 aa13.47□□□□□ -0.25
CHRFAM7A-202ENST00000397827 OPRPNQ99935 248 aaPredicted RBP13.47□□□□□ -0.25
CHRFAM7A-202ENST00000397827 RBMY1BA6NDE4 496 aaKnown RBP13.47□□□□□ -0.25
CHRFAM7A-202ENST00000397827 RBMY1EA6NEQ0 496 aaKnown RBP13.47□□□□□ -0.25
CHRFAM7A-202ENST00000397827 M0QXV9 152 aa13.47□□□□□ -0.25
CHRFAM7A-202ENST00000397827 RBMY1DP0C7P1 496 aaKnown RBP13.47□□□□□ -0.25
CHRFAM7A-202ENST00000397827 FLNAP21333 2647 aaKnown RBP13.47□□□□□ -0.25
CHRFAM7A-202ENST00000397827 LRRC75A-AS1Q8N1F1 130 aa13.46□□□□□ -0.25
CHRFAM7A-202ENST00000397827 TRGV11A0A075B6L2 103 aa13.46□□□□□ -0.26
CHRFAM7A-202ENST00000397827 ZNF815PA8K554 130 aa13.46□□□□□ -0.26
CHRFAM7A-202ENST00000397827 H3BMM0 161 aa13.46□□□□□ -0.26
CHRFAM7A-202ENST00000397827 MEIG1Q5JSS6 88 aa13.46□□□□□ -0.26
CHRFAM7A-202ENST00000397827 TRPT1Q86TN4 253 aaKnown RBP13.45□□□□□ -0.26
CHRFAM7A-202ENST00000397827 TCL1BO95988 128 aa13.45□□□□□ -0.26
CHRFAM7A-202ENST00000397827 PROK1P58294 105 aa13.45□□□□□ -0.26
CHRFAM7A-202ENST00000397827 PLEKHB2Q96CS7 222 aa13.45□□□□□ -0.26
CHRFAM7A-202ENST00000397827 TIMM17AQ99595 171 aa13.45□□□□□ -0.26
CHRFAM7A-202ENST00000397827 P0DMU3 169 aa13.44□□□□□ -0.26
CHRFAM7A-202ENST00000397827 FAM231AP0DMU4 169 aa13.44□□□□□ -0.26
CHRFAM7A-202ENST00000397827 FAM231CP0DMU5 169 aa13.44□□□□□ -0.26
CHRFAM7A-202ENST00000397827 TMEM141Q96I45 108 aa13.44□□□□□ -0.26
CHRFAM7A-202ENST00000397827 C3orf56Q8N813 242 aa13.44□□□□□ -0.26
CHRFAM7A-202ENST00000397827 C4orf3Q8WVX3 66 aa13.44□□□□□ -0.26
CHRFAM7A-202ENST00000397827 SCGB1D4Q6XE38 83 aa13.43□□□□□ -0.26
CHRFAM7A-202ENST00000397827 C11orf44Q8N8P7 122 aa13.43□□□□□ -0.26
CHRFAM7A-202ENST00000397827 ZNRF2Q8NHG8 242 aa13.43□□□□□ -0.26
CHRFAM7A-202ENST00000397827 PEMTQ9UBM1 199 aa13.43□□□□□ -0.26
CHRFAM7A-202ENST00000397827 UBE2D3P61077 147 aa13.43□□□□□ -0.26
CHRFAM7A-202ENST00000397827 UBE2D2P62837 147 aa13.43□□□□□ -0.26
CHRFAM7A-202ENST00000397827 TMEM170BQ5T4T1 132 aa13.43□□□□□ -0.26
CHRFAM7A-202ENST00000397827 WFDC11Q8NEX6 87 aa13.43□□□□□ -0.26
CHRFAM7A-202ENST00000397827 DYNLRB2Q8TF09 96 aa13.42□□□□□ -0.26
CHRFAM7A-202ENST00000397827 HIST2H2BCQ6DN03 193 aa13.42□□□□□ -0.26
CHRFAM7A-202ENST00000397827 TENM4Q6N022 2769 aa13.41□□□□□ -0.26
CHRFAM7A-202ENST00000397827 MAP6D1Q9H9H5 199 aa13.41□□□□□ -0.26
CHRFAM7A-202ENST00000397827 ACANP16112 2415 aa13.41□□□□□ -0.26
CHRFAM7A-202ENST00000397827 NSUN5P1Q3KNT7 163 aa13.41□□□□□ -0.26
CHRFAM7A-202ENST00000397827 LYRM7Q5U5X0 104 aa13.41□□□□□ -0.26
CHRFAM7A-202ENST00000397827 Q6ZSV7 163 aa13.41□□□□□ -0.26
CHRFAM7A-202ENST00000397827 SBSPONQ8IVN8 264 aa13.41□□□□□ -0.26
CHRFAM7A-202ENST00000397827 I3L3M4 83 aa13.4□□□□□ -0.26
CHRFAM7A-202ENST00000397827 Q9UF83 564 aa13.4□□□□□ -0.26
CHRFAM7A-202ENST00000397827 PAPPA-AS1Q5QFB9 102 aa13.4□□□□□ -0.26
CHRFAM7A-202ENST00000397827 NIPBLQ6KC79 2804 aaeCLIP13.39□□□□□ -0.27
CHRFAM7A-202ENST00000397827 TSPEAR-AS2P59090 65 aa13.39□□□□□ -0.27
CHRFAM7A-202ENST00000397827 SRSF9Q13242 221 aaKnown RBP eCLIP13.39□□□□□ -0.27
CHRFAM7A-202ENST00000397827 RHOHQ15669 191 aa13.39□□□□□ -0.27
CHRFAM7A-202ENST00000397827 C20orf203Q8NBC4 194 aa13.39□□□□□ -0.27
CHRFAM7A-202ENST00000397827 NACAE9PAV3 2078 aa13.39□□□□□ -0.27
CHRFAM7A-202ENST00000397827 HERVK_113P61574 105 aa13.39□□□□□ -0.27
CHRFAM7A-202ENST00000397827 DEFB114Q30KQ6 69 aa13.39□□□□□ -0.27
CHRFAM7A-202ENST00000397827 NOTCH3Q9UM47 2321 aa13.38□□□□□ -0.27
CHRFAM7A-202ENST00000397827 A0A1W2PRX2 142 aa13.38□□□□□ -0.27
CHRFAM7A-202ENST00000397827 SCGB1C2P0DMR2 95 aa13.38□□□□□ -0.27
CHRFAM7A-202ENST00000397827 UBE2D1P51668 147 aa13.38□□□□□ -0.27
CHRFAM7A-202ENST00000397827 A8MTW9 85 aa13.38□□□□□ -0.27
CHRFAM7A-202ENST00000397827 DNAJC9-AS1A6NH13 148 aa13.37□□□□□ -0.27
CHRFAM7A-202ENST00000397827 Q6ZSN1 163 aa13.37□□□□□ -0.27
CHRFAM7A-202ENST00000397827 LINC01587Q99440 93 aa13.37□□□□□ -0.27
CHRFAM7A-202ENST00000397827 MTORP42345 2549 aa13.36□□□□□ -0.27
CHRFAM7A-202ENST00000397827 M0R2P5 195 aa13.36□□□□□ -0.27
CHRFAM7A-202ENST00000397827 Q6Q795 121 aa13.36□□□□□ -0.27
CHRFAM7A-202ENST00000397827 TRAV2A0A0B4J234 112 aa13.35□□□□□ -0.27
CHRFAM7A-202ENST00000397827 SLC25A20O43772 301 aa13.35□□□□□ -0.27
CHRFAM7A-202ENST00000397827 SPANXA1Q9NS26 97 aa13.35□□□□□ -0.27
CHRFAM7A-202ENST00000397827 IGLV4-3A0A075B6K6 122 aa13.34□□□□□ -0.27
CHRFAM7A-202ENST00000397827 IGHV3-64A0A075B6Q5 118 aa13.34□□□□□ -0.27
CHRFAM7A-202ENST00000397827 A0A0J9YY99 117 aa13.34□□□□□ -0.27
CHRFAM7A-202ENST00000397827 C9JAW5 83 aa13.34□□□□□ -0.27
CHRFAM7A-202ENST00000397827 CEMP1Q6PRD7 247 aaPredicted RBP13.34□□□□□ -0.27
CHRFAM7A-202ENST00000397827 C15orf53Q8NAA6 179 aa13.34□□□□□ -0.27
CHRFAM7A-202ENST00000397827 ESM1Q9NQ30 184 aa13.34□□□□□ -0.27
CHRFAM7A-202ENST00000397827 CSDC2Q9Y534 153 aaKnown RBP13.34□□□□□ -0.27
CHRFAM7A-202ENST00000397827 CD28P10747 220 aa13.34□□□□□ -0.27
CHRFAM7A-202ENST00000397827 ZNF415Q09FC8 603 aa13.34□□□□□ -0.27
CHRFAM7A-202ENST00000397827 NDUFA11Q86Y39 141 aa13.34□□□□□ -0.27
CHRFAM7A-202ENST00000397827 XCL2Q9UBD3 114 aa13.33□□□□□ -0.27
CHRFAM7A-202ENST00000397827 JMJD1CQ15652 2540 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms