RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 TRBV6-5A0A0K0K1A5 114 aa13.94□□□□□ -0.18
PDLIM2-204ENST00000397760 POLR2KP53803 58 aaKnown RBP13.94□□□□□ -0.18
PDLIM2-204ENST00000397760 OR11H2Q8NH07 326 aa13.94□□□□□ -0.18
PDLIM2-204ENST00000397760 TTTY13Q9BZ97 58 aa13.94□□□□□ -0.18
PDLIM2-204ENST00000397760 CYSLTR1Q9Y271 337 aa13.94□□□□□ -0.18
PDLIM2-204ENST00000397760 E9PLD3 99 aa13.93□□□□□ -0.18
PDLIM2-204ENST00000397760 VCYO14598 125 aa13.93□□□□□ -0.18
PDLIM2-204ENST00000397760 KRTAP21-3Q3LHN1 58 aa13.93□□□□□ -0.18
PDLIM2-204ENST00000397760 MAPKAPK5-AS1Q8N8E1 139 aa13.93□□□□□ -0.18
PDLIM2-204ENST00000397760 C11orf72Q8NBR9 251 aa13.93□□□□□ -0.18
PDLIM2-204ENST00000397760 PHLDA1Q8WV24 401 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-204ENST00000397760 MYMXA0A1B0GTQ4 84 aa13.92□□□□□ -0.18
PDLIM2-204ENST00000397760 A8MZ25 164 aa13.92□□□□□ -0.18
PDLIM2-204ENST00000397760 RAB37Q96AX2 223 aa13.92□□□□□ -0.18
PDLIM2-204ENST00000397760 TMEM141Q96I45 108 aa13.92□□□□□ -0.18
PDLIM2-204ENST00000397760 SPCS1Q9Y6A9 102 aa13.92□□□□□ -0.18
PDLIM2-204ENST00000397760 SYT8Q8NBV8 401 aa13.92□□□□□ -0.18
PDLIM2-204ENST00000397760 TMEM263Q8WUH6 116 aaKnown RBP13.91□□□□□ -0.18
PDLIM2-204ENST00000397760 KIR2DL4Q99706 377 aa13.91□□□□□ -0.18
PDLIM2-204ENST00000397760 PRSS29PA6NIE9 313 aa13.9□□□□□ -0.18
PDLIM2-204ENST00000397760 RRN3P1Q2M238 152 aa13.9□□□□□ -0.18
PDLIM2-204ENST00000397760 KPRPQ5T749 579 aaPredicted RBP13.9□□□□□ -0.18
PDLIM2-204ENST00000397760 TIMM17AQ99595 171 aa13.9□□□□□ -0.18
PDLIM2-204ENST00000397760 DNAH3Q8TD57 4116 aa13.9□□□□□ -0.18
PDLIM2-204ENST00000397760 TRBV27A0A0K0K1C4 114 aa13.9□□□□□ -0.18
PDLIM2-204ENST00000397760 DEFB135Q30KP9 77 aa13.9□□□□□ -0.18
PDLIM2-204ENST00000397760 ZNF876PQ49A33 203 aa13.9□□□□□ -0.18
PDLIM2-204ENST00000397760 SUMO4Q6EEV6 95 aa13.9□□□□□ -0.18
PDLIM2-204ENST00000397760 SPXQ9BT56 116 aa13.9□□□□□ -0.18
PDLIM2-204ENST00000397760 M0R2P5 195 aa13.89□□□□□ -0.19
PDLIM2-204ENST00000397760 PRB2P02812 416 aaPredicted RBP13.89□□□□□ -0.19
PDLIM2-204ENST00000397760 C16orf74Q96GX8 76 aa13.89□□□□□ -0.19
PDLIM2-204ENST00000397760 TRBV7-3A0A075B6L6 115 aa13.88□□□□□ -0.19
PDLIM2-204ENST00000397760 IGIPA6NJ69 53 aa13.88□□□□□ -0.19
PDLIM2-204ENST00000397760 PCP4P48539 62 aa13.88□□□□□ -0.19
PDLIM2-204ENST00000397760 ZFP2Q6ZN57 461 aa13.88□□□□□ -0.19
PDLIM2-204ENST00000397760 A0A1B0GWB2 263 aa13.87□□□□□ -0.19
PDLIM2-204ENST00000397760 NEGR1Q7Z3B1 354 aa13.87□□□□□ -0.19
PDLIM2-204ENST00000397760 HIST1H4GQ99525 98 aa13.87□□□□□ -0.19
PDLIM2-204ENST00000397760 NHP2Q9NX24 153 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-204ENST00000397760 MUC4Q99102 2169 aa13.87□□□□□ -0.19
PDLIM2-204ENST00000397760 PMVKQ15126 192 aa13.87□□□□□ -0.19
PDLIM2-204ENST00000397760 IL17DQ8TAD2 202 aa13.87□□□□□ -0.19
PDLIM2-204ENST00000397760 JPT2Q9H910 190 aa13.87□□□□□ -0.19
PDLIM2-204ENST00000397760 X6R8D5 127 aa13.87□□□□□ -0.19
PDLIM2-204ENST00000397760 PTH2Q96A98 100 aa13.86□□□□□ -0.19
PDLIM2-204ENST00000397760 SMIM9A6NGZ8 99 aa13.85□□□□□ -0.19
PDLIM2-204ENST00000397760 HERVK_113P61574 105 aa13.85□□□□□ -0.19
PDLIM2-204ENST00000397760 RHOHQ15669 191 aa13.85□□□□□ -0.19
PDLIM2-204ENST00000397760 C12orf74Q32Q52 190 aa13.85□□□□□ -0.19
PDLIM2-204ENST00000397760 TP53TG1Q9Y2A0 90 aa13.85□□□□□ -0.19
PDLIM2-204ENST00000397760 PLAC8L1A1L4L8 177 aa13.85□□□□□ -0.19
PDLIM2-204ENST00000397760 SDHAF1A6NFY7 115 aa13.85□□□□□ -0.19
PDLIM2-204ENST00000397760 CRYGDP07320 174 aa13.85□□□□□ -0.19
PDLIM2-204ENST00000397760 RNF151Q2KHN1 245 aa13.85□□□□□ -0.19
PDLIM2-204ENST00000397760 RNF183Q96D59 192 aa13.85□□□□□ -0.19
PDLIM2-204ENST00000397760 NAA38Q9BRA0 125 aaKnown RBP13.85□□□□□ -0.19
PDLIM2-204ENST00000397760 PRADC1Q9BSG0 188 aa13.85□□□□□ -0.19
PDLIM2-204ENST00000397760 MRPL16Q9NX20 251 aaKnown RBP13.85□□□□□ -0.19
PDLIM2-204ENST00000397760 IGLL5B9A064 214 aa13.84□□□□□ -0.19
PDLIM2-204ENST00000397760 F5H697 171 aa13.84□□□□□ -0.19
PDLIM2-204ENST00000397760 NOP10Q9NPE3 64 aaKnown RBP13.84□□□□□ -0.19
PDLIM2-204ENST00000397760 TSHBP01222 138 aa13.83□□□□□ -0.2
PDLIM2-204ENST00000397760 DAZ2Q13117 558 aaKnown RBP13.83□□□□□ -0.2
PDLIM2-204ENST00000397760 PIK3CD-AS1Q5SR53 167 aa13.83□□□□□ -0.2
PDLIM2-204ENST00000397760 VPS25Q9BRG1 176 aa13.83□□□□□ -0.2
PDLIM2-204ENST00000397760 EDA2RQ9HAV5 297 aa13.83□□□□□ -0.2
PDLIM2-204ENST00000397760 A0A087WWL8 130 aa13.83□□□□□ -0.2
PDLIM2-204ENST00000397760 K7EIL1 84 aa13.83□□□□□ -0.2
PDLIM2-204ENST00000397760 M0QY20 66 aa13.83□□□□□ -0.2
PDLIM2-204ENST00000397760 IGLV4-69A0A075B6H9 119 aa13.82□□□□□ -0.2
PDLIM2-204ENST00000397760 TRGV1A0A0A0MS02 117 aa13.82□□□□□ -0.2
PDLIM2-204ENST00000397760 TMEM238LA0A1B0GVL6 79 aa13.82□□□□□ -0.2
PDLIM2-204ENST00000397760 A6NJY4 79 aa13.82□□□□□ -0.2
PDLIM2-204ENST00000397760 C11orf86A6NJI1 115 aa13.81□□□□□ -0.2
PDLIM2-204ENST00000397760 K7ERJ3 54 aa13.81□□□□□ -0.2
PDLIM2-204ENST00000397760 EMP1P54849 157 aa13.81□□□□□ -0.2
PDLIM2-204ENST00000397760 FAM74A4Q5TZK3 123 aa13.8□□□□□ -0.2
PDLIM2-204ENST00000397760 ZNF479Q96JC4 524 aa13.8□□□□□ -0.2
PDLIM2-204ENST00000397760 OVOL2Q9BRP0 275 aa13.8□□□□□ -0.2
PDLIM2-204ENST00000397760 MGAM2Q2M2H8 2515 aa13.8□□□□□ -0.2
PDLIM2-204ENST00000397760 ZNF815PA8K554 130 aa13.8□□□□□ -0.2
PDLIM2-204ENST00000397760 A8MWV9 139 aa13.8□□□□□ -0.2
PDLIM2-204ENST00000397760 DEFB121Q5J5C9 76 aa13.8□□□□□ -0.2
PDLIM2-204ENST00000397760 Q6ZTI0 123 aa13.8□□□□□ -0.2
PDLIM2-204ENST00000397760 DNHD1Q96M86 4753 aa13.79□□□□□ -0.2
PDLIM2-204ENST00000397760 F8W1H4 67 aa13.78□□□□□ -0.2
PDLIM2-204ENST00000397760 MIFP14174 115 aa13.78□□□□□ -0.2
PDLIM2-204ENST00000397760 ZNF56Q15929 161 aa13.78□□□□□ -0.2
PDLIM2-204ENST00000397760 NOTCH1P46531 2555 aa13.78□□□□□ -0.2
PDLIM2-204ENST00000397760 IGHV4-28A0A0C4DH34 117 aa13.78□□□□□ -0.2
PDLIM2-204ENST00000397760 CFAP126Q5VTH2 177 aa13.78□□□□□ -0.2
PDLIM2-204ENST00000397760 NFE4Q86UQ8 179 aa13.78□□□□□ -0.2
PDLIM2-204ENST00000397760 RETNQ9HD89 108 aa13.77□□□□□ -0.21
PDLIM2-204ENST00000397760 SPANXB1Q9NS25 103 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-204ENST00000397760 RS1O15537 224 aa13.76□□□□□ -0.21
PDLIM2-204ENST00000397760 GAGE7O76087 117 aa13.76□□□□□ -0.21
PDLIM2-204ENST00000397760 GAGE12FP0CL80 117 aa13.76□□□□□ -0.21
PDLIM2-204ENST00000397760 GAGE12GP0CL81 117 aa13.76□□□□□ -0.21
PDLIM2-204ENST00000397760 GAGE12IP0CL82 117 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms