RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 CHTOPQ9Y3Y2 248 aaKnown RBP10.72□□□□□ -0.69
TM9SF1-202ENST00000396854 SPCS1Q9Y6A9 102 aa10.72□□□□□ -0.69
TM9SF1-202ENST00000396854 RPL32P62910 135 aaKnown RBP10.7□□□□□ -0.7
TM9SF1-202ENST00000396854 C21orf62-AS1Q17RA5 79 aa10.7□□□□□ -0.7
TM9SF1-202ENST00000396854 LINC01587Q99440 93 aa10.7□□□□□ -0.7
TM9SF1-202ENST00000396854 C2orf66Q6UXQ4 117 aa10.7□□□□□ -0.7
TM9SF1-202ENST00000396854 KIF25-AS1Q9Y6Z4 181 aa10.7□□□□□ -0.7
TM9SF1-202ENST00000396854 DEFB135Q30KP9 77 aa10.69□□□□□ -0.7
TM9SF1-202ENST00000396854 BAALCQ8WXS3 180 aa10.69□□□□□ -0.7
TM9SF1-202ENST00000396854 LINC00315P59091 139 aa10.69□□□□□ -0.7
TM9SF1-202ENST00000396854 C9orf85Q96MD7 179 aa10.69□□□□□ -0.7
TM9SF1-202ENST00000396854 VPS25Q9BRG1 176 aa10.69□□□□□ -0.7
TM9SF1-202ENST00000396854 IGHV3OR16-12A0A075B7B8 117 aa10.68□□□□□ -0.7
TM9SF1-202ENST00000396854 IGHV3-16A0A0C4DH30 117 aa10.68□□□□□ -0.7
TM9SF1-202ENST00000396854 K7ERJ3 54 aa10.68□□□□□ -0.7
TM9SF1-202ENST00000396854 DEFB121Q5J5C9 76 aa10.68□□□□□ -0.7
TM9SF1-202ENST00000396854 NEGR1Q7Z3B1 354 aa10.68□□□□□ -0.7
TM9SF1-202ENST00000396854 RNF183Q96D59 192 aa10.68□□□□□ -0.7
TM9SF1-202ENST00000396854 NHP2Q9NX24 153 aaKnown RBP10.68□□□□□ -0.7
TM9SF1-202ENST00000396854 TP53TG1Q9Y2A0 90 aa10.68□□□□□ -0.7
TM9SF1-202ENST00000396854 TRGV11A0A075B6L2 103 aa10.67□□□□□ -0.7
TM9SF1-202ENST00000396854 OR11H2Q8NH07 326 aa10.67□□□□□ -0.7
TM9SF1-202ENST00000396854 MYMXA0A1B0GTQ4 84 aa10.67□□□□□ -0.7
TM9SF1-202ENST00000396854 LINC01549A6NIU2 74 aa10.67□□□□□ -0.7
TM9SF1-202ENST00000396854 MRAPQ8TCY5 172 aa10.67□□□□□ -0.7
TM9SF1-202ENST00000396854 TRBV7-3A0A075B6L6 115 aa10.66□□□□□ -0.7
TM9SF1-202ENST00000396854 X6R8D5 127 aa10.66□□□□□ -0.7
TM9SF1-202ENST00000396854 SMIM9A6NGZ8 99 aa10.65□□□□□ -0.7
TM9SF1-202ENST00000396854 PRSS29PA6NIE9 313 aa10.65□□□□□ -0.7
TM9SF1-202ENST00000396854 E9PLD3 99 aa10.65□□□□□ -0.7
TM9SF1-202ENST00000396854 PRM2P04554 102 aa10.65□□□□□ -0.7
TM9SF1-202ENST00000396854 HTN1P15515 57 aa10.65□□□□□ -0.7
TM9SF1-202ENST00000396854 SBSPONQ8IVN8 264 aa10.65□□□□□ -0.7
TM9SF1-202ENST00000396854 TMEM263Q8WUH6 116 aaKnown RBP10.65□□□□□ -0.7
TM9SF1-202ENST00000396854 POLR2KP53803 58 aaKnown RBP10.65□□□□□ -0.7
TM9SF1-202ENST00000396854 RRN3P1Q2M238 152 aa10.65□□□□□ -0.7
TM9SF1-202ENST00000396854 HIST1H4GQ99525 98 aa10.65□□□□□ -0.7
TM9SF1-202ENST00000396854 CYSLTR1Q9Y271 337 aa10.65□□□□□ -0.7
TM9SF1-202ENST00000396854 AZU1P20160 251 aa10.64□□□□□ -0.71
TM9SF1-202ENST00000396854 C12orf74Q32Q52 190 aa10.64□□□□□ -0.71
TM9SF1-202ENST00000396854 SUMO4Q6EEV6 95 aa10.64□□□□□ -0.71
TM9SF1-202ENST00000396854 C11orf72Q8NBR9 251 aa10.64□□□□□ -0.71
TM9SF1-202ENST00000396854 OVOL2Q9BRP0 275 aa10.64□□□□□ -0.71
TM9SF1-202ENST00000396854 A0A1B0GWB2 263 aa10.64□□□□□ -0.71
TM9SF1-202ENST00000396854 IGLL5B9A064 214 aa10.64□□□□□ -0.71
TM9SF1-202ENST00000396854 ZNF415Q09FC8 603 aa10.64□□□□□ -0.71
TM9SF1-202ENST00000396854 C16orf74Q96GX8 76 aa10.64□□□□□ -0.71
TM9SF1-202ENST00000396854 TM2D3Q9BRN9 247 aa10.64□□□□□ -0.71
TM9SF1-202ENST00000396854 MDFICQ9P1T7 246 aa10.64□□□□□ -0.71
TM9SF1-202ENST00000396854 IL17DQ8TAD2 202 aa10.63□□□□□ -0.71
TM9SF1-202ENST00000396854 PRADC1Q9BSG0 188 aa10.63□□□□□ -0.71
TM9SF1-202ENST00000396854 CRYGDP07320 174 aa10.62□□□□□ -0.71
TM9SF1-202ENST00000396854 ZFP2Q6ZN57 461 aa10.62□□□□□ -0.71
TM9SF1-202ENST00000396854 SYT8Q8NBV8 401 aa10.62□□□□□ -0.71
TM9SF1-202ENST00000396854 JPT2Q9H910 190 aa10.62□□□□□ -0.71
TM9SF1-202ENST00000396854 TRBV6-5A0A0K0K1A5 114 aa10.62□□□□□ -0.71
TM9SF1-202ENST00000396854 PLAC8L1A1L4L8 177 aa10.62□□□□□ -0.71
TM9SF1-202ENST00000396854 IGIPA6NJ69 53 aa10.62□□□□□ -0.71
TM9SF1-202ENST00000396854 VCYO14598 125 aa10.62□□□□□ -0.71
TM9SF1-202ENST00000396854 TSHBP01222 138 aa10.62□□□□□ -0.71
TM9SF1-202ENST00000396854 MIFP14174 115 aa10.62□□□□□ -0.71
TM9SF1-202ENST00000396854 NBEAL2Q6ZNJ1 2754 aa10.61□□□□□ -0.71
TM9SF1-202ENST00000396854 PAPPA-AS1Q5QFB9 102 aa10.61□□□□□ -0.71
TM9SF1-202ENST00000396854 TMEM141Q96I45 108 aa10.61□□□□□ -0.71
TM9SF1-202ENST00000396854 ZNF479Q96JC4 524 aa10.61□□□□□ -0.71
TM9SF1-202ENST00000396854 B9D2Q9BPU9 175 aa10.61□□□□□ -0.71
TM9SF1-202ENST00000396854 SPATA25Q9BR10 227 aa10.61□□□□□ -0.71
TM9SF1-202ENST00000396854 RETNQ9HD89 108 aa10.61□□□□□ -0.71
TM9SF1-202ENST00000396854 IGLV4-69A0A075B6H9 119 aa10.61□□□□□ -0.71
TM9SF1-202ENST00000396854 Q8NAQ8 132 aa10.61□□□□□ -0.71
TM9SF1-202ENST00000396854 TIMM17AQ99595 171 aa10.61□□□□□ -0.71
TM9SF1-202ENST00000396854 KIR2DL4Q99706 377 aa10.61□□□□□ -0.71
TM9SF1-202ENST00000396854 A0A087WWL8 130 aa10.6□□□□□ -0.71
TM9SF1-202ENST00000396854 TRBV27A0A0K0K1C4 114 aa10.6□□□□□ -0.71
TM9SF1-202ENST00000396854 PMVKQ15126 192 aa10.6□□□□□ -0.71
TM9SF1-202ENST00000396854 PTH2Q96A98 100 aa10.6□□□□□ -0.71
TM9SF1-202ENST00000396854 SPXQ9BT56 116 aa10.6□□□□□ -0.71
TM9SF1-202ENST00000396854 SDHAF1A6NFY7 115 aa10.59□□□□□ -0.71
TM9SF1-202ENST00000396854 MEGF8Q7Z7M0 2845 aa10.59□□□□□ -0.71
TM9SF1-202ENST00000396854 IGHV4-28A0A0C4DH34 117 aa10.59□□□□□ -0.71
TM9SF1-202ENST00000396854 C11orf86A6NJI1 115 aa10.59□□□□□ -0.71
TM9SF1-202ENST00000396854 ZNF815PA8K554 130 aa10.59□□□□□ -0.71
TM9SF1-202ENST00000396854 F5H697 171 aa10.59□□□□□ -0.71
TM9SF1-202ENST00000396854 DAZ2Q13117 558 aaKnown RBP10.59□□□□□ -0.71
TM9SF1-202ENST00000396854 COTL1Q14019 142 aa10.59□□□□□ -0.71
TM9SF1-202ENST00000396854 PIK3CD-AS1Q5SR53 167 aa10.59□□□□□ -0.71
TM9SF1-202ENST00000396854 NACAE9PAV3 2078 aa10.58□□□□□ -0.72
TM9SF1-202ENST00000396854 M0R2P5 195 aa10.57□□□□□ -0.72
TM9SF1-202ENST00000396854 HERVK_113P61574 105 aa10.57□□□□□ -0.72
TM9SF1-202ENST00000396854 RPL39P62891 51 aaKnown RBP10.57□□□□□ -0.72
TM9SF1-202ENST00000396854 F8W1H4 67 aa10.57□□□□□ -0.72
TM9SF1-202ENST00000396854 M0QY20 66 aa10.56□□□□□ -0.72
TM9SF1-202ENST00000396854 TMEM238LA0A1B0GVL6 79 aa10.56□□□□□ -0.72
TM9SF1-202ENST00000396854 A6NJY4 79 aa10.56□□□□□ -0.72
TM9SF1-202ENST00000396854 RHOHQ15669 191 aa10.56□□□□□ -0.72
TM9SF1-202ENST00000396854 ZNF876PQ49A33 203 aa10.56□□□□□ -0.72
TM9SF1-202ENST00000396854 FAM74A4Q5TZK3 123 aa10.56□□□□□ -0.72
TM9SF1-202ENST00000396854 PLEKHB2Q96CS7 222 aa10.56□□□□□ -0.72
TM9SF1-202ENST00000396854 C11orf68Q9H3H3 251 aaKnown RBP10.56□□□□□ -0.72
TM9SF1-202ENST00000396854 NOP10Q9NPE3 64 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms