RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 MAP1LC3AQ9H492 121 aa7.1□□□□□ -1.27
NEDD8-202ENST00000396828 ST20Q9HBF5 79 aa7.1□□□□□ -1.27
NEDD8-202ENST00000396828 NIT2Q9NQR4 276 aa7.1□□□□□ -1.27
NEDD8-202ENST00000396828 HHLA3Q9XRX5 114 aa7.1□□□□□ -1.27
NEDD8-202ENST00000396828 TMA7Q9Y2S6 64 aaKnown RBP7.1□□□□□ -1.27
NEDD8-202ENST00000396828 TRBV10-1A0A0K0K1A3 114 aa7.09□□□□□ -1.27
NEDD8-202ENST00000396828 K7EQD1 137 aa7.09□□□□□ -1.27
NEDD8-202ENST00000396828 NPYP01303 97 aa7.09□□□□□ -1.27
NEDD8-202ENST00000396828 S100A6P06703 90 aa7.09□□□□□ -1.27
NEDD8-202ENST00000396828 GATA1P15976 413 aaPredicted RBP7.09□□□□□ -1.27
NEDD8-202ENST00000396828 NDUFA6P56556 154 aa7.09□□□□□ -1.27
NEDD8-202ENST00000396828 Q0VG73 95 aa7.09□□□□□ -1.27
NEDD8-202ENST00000396828 FHL2Q14192 279 aa7.09□□□□□ -1.27
NEDD8-202ENST00000396828 RHOHQ15669 191 aa7.09□□□□□ -1.27
NEDD8-202ENST00000396828 BAGE3Q86Y29 109 aa7.09□□□□□ -1.27
NEDD8-202ENST00000396828 NRACQ8N912 160 aa7.09□□□□□ -1.27
NEDD8-202ENST00000396828 PRSS3P2Q8NHM4 247 aa7.09□□□□□ -1.27
NEDD8-202ENST00000396828 C18orf32Q8TCD1 76 aa7.09□□□□□ -1.27
NEDD8-202ENST00000396828 RPL39LQ96EH5 51 aaKnown RBP7.09□□□□□ -1.27
NEDD8-202ENST00000396828 VSIG2Q96IQ7 327 aa7.09□□□□□ -1.27
NEDD8-202ENST00000396828 DNAJC30Q96LL9 226 aa7.09□□□□□ -1.27
NEDD8-202ENST00000396828 TNFRSF18Q9Y5U5 241 aa7.09□□□□□ -1.27
NEDD8-202ENST00000396828 VPS13BQ7Z7G8 4022 aa7.09□□□□□ -1.27
NEDD8-202ENST00000396828 TRBV6-5A0A0K0K1A5 114 aa7.08□□□□□ -1.28
NEDD8-202ENST00000396828 LOC389332A0A1B0GUA5 103 aa7.08□□□□□ -1.28
NEDD8-202ENST00000396828 GAS8-AS1O95177 125 aa7.08□□□□□ -1.28
NEDD8-202ENST00000396828 PMCHP20382 165 aa7.08□□□□□ -1.28
NEDD8-202ENST00000396828 SUMO2P61956 95 aaKnown RBP7.08□□□□□ -1.28
NEDD8-202ENST00000396828 Q6ZSN1 163 aa7.08□□□□□ -1.28
NEDD8-202ENST00000396828 Q8N1X5 172 aa7.08□□□□□ -1.28
NEDD8-202ENST00000396828 SLC25A29Q8N8R3 303 aa7.08□□□□□ -1.28
NEDD8-202ENST00000396828 UPK3BQ9BT76 320 aa7.08□□□□□ -1.28
NEDD8-202ENST00000396828 PRO0255Q9UI72 69 aa7.08□□□□□ -1.28
NEDD8-202ENST00000396828 A0A096LPF7 62 aa7.07□□□□□ -1.28
NEDD8-202ENST00000396828 PRSS47A8MTI9 375 aa7.07□□□□□ -1.28
NEDD8-202ENST00000396828 RPL36AP83881 106 aaKnown RBP7.07□□□□□ -1.28
NEDD8-202ENST00000396828 IQCJQ1A5X6 159 aa7.07□□□□□ -1.28
NEDD8-202ENST00000396828 RPL36ALQ969Q0 106 aaKnown RBP7.07□□□□□ -1.28
NEDD8-202ENST00000396828 NXT2Q9NPJ8 142 aaKnown RBP7.07□□□□□ -1.28
NEDD8-202ENST00000396828 MYCBP2O75592 4640 aa7.06□□□□□ -1.28
NEDD8-202ENST00000396828 TRBV7-3A0A075B6L6 115 aa7.06□□□□□ -1.28
NEDD8-202ENST00000396828 SDHAF1A6NFY7 115 aa7.06□□□□□ -1.28
NEDD8-202ENST00000396828 VCYO14598 125 aa7.06□□□□□ -1.28
NEDD8-202ENST00000396828 PAX4O43316 350 aa7.06□□□□□ -1.28
NEDD8-202ENST00000396828 CRYBA4P53673 196 aa7.06□□□□□ -1.28
NEDD8-202ENST00000396828 RPL32P62910 135 aaKnown RBP7.06□□□□□ -1.28
NEDD8-202ENST00000396828 RNASEKQ6P5S7 137 aaKnown RBP7.06□□□□□ -1.28
NEDD8-202ENST00000396828 Q6ZRN7 208 aaPredicted RBP7.06□□□□□ -1.28
NEDD8-202ENST00000396828 FA2HQ7L5A8 372 aa7.06□□□□□ -1.28
NEDD8-202ENST00000396828 NEXN-AS1Q8NBZ9 246 aa7.06□□□□□ -1.28
NEDD8-202ENST00000396828 CHCHD1Q96BP2 118 aaKnown RBP7.06□□□□□ -1.28
NEDD8-202ENST00000396828 KIR2DL4Q99706 377 aa7.06□□□□□ -1.28
NEDD8-202ENST00000396828 SMIM2Q9BVW6 85 aa7.06□□□□□ -1.28
NEDD8-202ENST00000396828 MRPS16Q9Y3D3 137 aaKnown RBP7.06□□□□□ -1.28
NEDD8-202ENST00000396828 I3L3M4 83 aa7.05□□□□□ -1.28
NEDD8-202ENST00000396828 K7EMI3 77 aa7.05□□□□□ -1.28
NEDD8-202ENST00000396828 TCAPO15273 167 aa7.05□□□□□ -1.28
NEDD8-202ENST00000396828 LINC00614P0C842 121 aa7.05□□□□□ -1.28
NEDD8-202ENST00000396828 IFI27P40305 119 aaPredicted RBP7.05□□□□□ -1.28
NEDD8-202ENST00000396828 NIT1Q86X76 327 aa7.05□□□□□ -1.28
NEDD8-202ENST00000396828 Q8N8P6 123 aa7.05□□□□□ -1.28
NEDD8-202ENST00000396828 TMEM70Q9BUB7 260 aa7.05□□□□□ -1.28
NEDD8-202ENST00000396828 AP5S1Q9NUS5 200 aa7.05□□□□□ -1.28
NEDD8-202ENST00000396828 SRRM2Q9UQ35 2752 aaKnown RBP7.05□□□□□ -1.28
NEDD8-202ENST00000396828 DNAH8Q96JB1 4490 aa7.05□□□□□ -1.28
NEDD8-202ENST00000396828 GAGE12JA6NER3 117 aa7.04□□□□□ -1.28
NEDD8-202ENST00000396828 H3BNG1 76 aa7.04□□□□□ -1.28
NEDD8-202ENST00000396828 HSBP1O75506 76 aa7.04□□□□□ -1.28
NEDD8-202ENST00000396828 SERF1AO75920 110 aa7.04□□□□□ -1.28
NEDD8-202ENST00000396828 GYPEP15421 78 aa7.04□□□□□ -1.28
NEDD8-202ENST00000396828 BTF3P20290 206 aaKnown RBP7.04□□□□□ -1.28
NEDD8-202ENST00000396828 FCER1GP30273 86 aa7.04□□□□□ -1.28
NEDD8-202ENST00000396828 POLR2KP53803 58 aaKnown RBP7.04□□□□□ -1.28
NEDD8-202ENST00000396828 GAGE1Q13065 139 aa7.04□□□□□ -1.28
NEDD8-202ENST00000396828 GAGE4Q13068 117 aa7.04□□□□□ -1.28
NEDD8-202ENST00000396828 GAGE5Q13069 117 aa7.04□□□□□ -1.28
NEDD8-202ENST00000396828 GAGE13Q4V321 117 aa7.04□□□□□ -1.28
NEDD8-202ENST00000396828 TTC32Q5I0X7 151 aa7.04□□□□□ -1.28
NEDD8-202ENST00000396828 COA6Q5JTJ3 125 aaKnown RBP7.04□□□□□ -1.28
NEDD8-202ENST00000396828 DAZ4Q86SG3 579 aaKnown RBP7.04□□□□□ -1.28
NEDD8-202ENST00000396828 DAZ3Q9NR90 486 aaKnown RBP7.04□□□□□ -1.28
NEDD8-202ENST00000396828 TRBV27A0A0K0K1C4 114 aa7.03□□□□□ -1.28
NEDD8-202ENST00000396828 G0S2P27469 103 aa7.03□□□□□ -1.28
NEDD8-202ENST00000396828 ORMDL2Q53FV1 153 aa7.03□□□□□ -1.28
NEDD8-202ENST00000396828 SH2D6Q7Z4S9 175 aa7.03□□□□□ -1.28
NEDD8-202ENST00000396828 LOC100131303A0A0U1RQF7 123 aa7.02□□□□□ -1.29
NEDD8-202ENST00000396828 LINC01546A6NGU7 62 aa7.02□□□□□ -1.29
NEDD8-202ENST00000396828 S100A2P29034 98 aa7.02□□□□□ -1.29
NEDD8-202ENST00000396828 UBE2D3P61077 147 aa7.02□□□□□ -1.29
NEDD8-202ENST00000396828 SNRPEP62304 92 aaKnown RBP7.02□□□□□ -1.29
NEDD8-202ENST00000396828 UBE2D2P62837 147 aa7.02□□□□□ -1.29
NEDD8-202ENST00000396828 LAGE3Q14657 143 aa7.02□□□□□ -1.29
NEDD8-202ENST00000396828 MRPL23Q16540 153 aaKnown RBP7.02□□□□□ -1.29
NEDD8-202ENST00000396828 Q9UF83 564 aa7.02□□□□□ -1.29
NEDD8-202ENST00000396828 ICOSQ9Y6W8 199 aa7.02□□□□□ -1.29
NEDD8-202ENST00000396828 IGHV3-38A0A0C4DH36 116 aa7.01□□□□□ -1.29
NEDD8-202ENST00000396828 C5orf52A6NGY3 159 aa7.01□□□□□ -1.29
NEDD8-202ENST00000396828 SIVA1O15304 175 aa7.01□□□□□ -1.29
NEDD8-202ENST00000396828 ESDP10768 282 aa7.01□□□□□ -1.29
NEDD8-202ENST00000396828 XGP55808 180 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms