RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 SP5Q6BEB4 398 aaPredicted RBP7.97□□□□□ -1.13
COL4A4-201ENST00000396625 IGKV2-24A0A0C4DH68 120 aa7.96□□□□□ -1.13
COL4A4-201ENST00000396625 LRRC75A-AS1Q8N1F1 130 aa7.96□□□□□ -1.13
COL4A4-201ENST00000396625 C3orf84H3BNL1 204 aa7.96□□□□□ -1.13
COL4A4-201ENST00000396625 VWCEQ96DN2 955 aa7.96□□□□□ -1.13
COL4A4-201ENST00000396625 SPATA12Q7Z6I5 190 aa7.96□□□□□ -1.14
COL4A4-201ENST00000396625 HIGD2AQ9BW72 106 aa7.96□□□□□ -1.14
COL4A4-201ENST00000396625 SERP2Q8N6R1 65 aa7.96□□□□□ -1.14
COL4A4-201ENST00000396625 IGHV4-30-4P0DP06 118 aa7.95□□□□□ -1.14
COL4A4-201ENST00000396625 IGHV4-31P0DP07 118 aa7.95□□□□□ -1.14
COL4A4-201ENST00000396625 DEFB135Q30KP9 77 aa7.95□□□□□ -1.14
COL4A4-201ENST00000396625 PKD1L2Q7Z442 2459 aa7.95□□□□□ -1.14
COL4A4-201ENST00000396625 CENPVL3A0A0U1RRI6 287 aa7.95□□□□□ -1.14
COL4A4-201ENST00000396625 Q6ZR03 302 aa7.95□□□□□ -1.14
COL4A4-201ENST00000396625 DEFB4AO15263 64 aa7.95□□□□□ -1.14
COL4A4-201ENST00000396625 FHL1Q13642 323 aa7.95□□□□□ -1.14
COL4A4-201ENST00000396625 SIRPDQ9H106 197 aa7.94□□□□□ -1.14
COL4A4-201ENST00000396625 MDFICQ9P1T7 246 aa7.94□□□□□ -1.14
COL4A4-201ENST00000396625 TRBV27A0A0K0K1C4 114 aa7.94□□□□□ -1.14
COL4A4-201ENST00000396625 UFSP1Q6NVU6 142 aa7.94□□□□□ -1.14
COL4A4-201ENST00000396625 KLK5Q9Y337 293 aaPredicted RBP7.94□□□□□ -1.14
COL4A4-201ENST00000396625 Q8N9L7 120 aa7.94□□□□□ -1.14
COL4A4-201ENST00000396625 MED14OSP0DP75 135 aa7.94□□□□□ -1.14
COL4A4-201ENST00000396625 Q6ZS92 163 aa7.94□□□□□ -1.14
COL4A4-201ENST00000396625 C1orf158Q8N1D5 194 aa7.93□□□□□ -1.14
COL4A4-201ENST00000396625 Q8N9W7 124 aa7.93□□□□□ -1.14
COL4A4-201ENST00000396625 A0A087WZ39 114 aa7.93□□□□□ -1.14
COL4A4-201ENST00000396625 IGKV1-17P01599 117 aa7.93□□□□□ -1.14
COL4A4-201ENST00000396625 CCKP06307 115 aa7.93□□□□□ -1.14
COL4A4-201ENST00000396625 CRIPAKQ8N1N5 446 aa7.93□□□□□ -1.14
COL4A4-201ENST00000396625 A0A096LNI7 61 aa7.93□□□□□ -1.14
COL4A4-201ENST00000396625 WT1P19544 449 aaPredicted RBP7.93□□□□□ -1.14
COL4A4-201ENST00000396625 A0A0J9YXY3 114 aa7.93□□□□□ -1.14
COL4A4-201ENST00000396625 SLPIP03973 132 aa7.93□□□□□ -1.14
COL4A4-201ENST00000396625 GPHB5Q86YW7 130 aa7.93□□□□□ -1.14
COL4A4-201ENST00000396625 DEFB112Q30KQ8 113 aa7.92□□□□□ -1.14
COL4A4-201ENST00000396625 C1orf147Q96MC9 270 aaPredicted RBP7.92□□□□□ -1.14
COL4A4-201ENST00000396625 FAM19A1Q7Z5A9 133 aa7.91□□□□□ -1.14
COL4A4-201ENST00000396625 IGKV1D-37A0A075B6S9 117 aa7.91□□□□□ -1.14
COL4A4-201ENST00000396625 FAM222AQ5U5X8 452 aa7.91□□□□□ -1.14
COL4A4-201ENST00000396625 ZFAND2AQ8N6M9 145 aa7.91□□□□□ -1.14
COL4A4-201ENST00000396625 CCDC179H3BU77 68 aa7.91□□□□□ -1.14
COL4A4-201ENST00000396625 COL4A6Q14031 1691 aa7.91□□□□□ -1.14
COL4A4-201ENST00000396625 I3L2K1 104 aa7.91□□□□□ -1.14
COL4A4-201ENST00000396625 C2orf70A6NJV1 201 aa7.91□□□□□ -1.14
COL4A4-201ENST00000396625 K7EIM0 57 aa7.91□□□□□ -1.14
COL4A4-201ENST00000396625 LINC00269Q8N2A0 174 aa7.91□□□□□ -1.14
COL4A4-201ENST00000396625 SPTBN4Q9H254 2564 aa7.91□□□□□ -1.14
COL4A4-201ENST00000396625 TRIAP1O43715 76 aa7.91□□□□□ -1.14
COL4A4-201ENST00000396625 TRBV6-1A0A0K0K1D8 114 aa7.9□□□□□ -1.14
COL4A4-201ENST00000396625 KAAG1Q9UBP8 84 aa7.9□□□□□ -1.14
COL4A4-201ENST00000396625 C4orf3Q8WVX3 66 aa7.9□□□□□ -1.14
COL4A4-201ENST00000396625 IGHV4-38-2P0DP08 117 aa7.9□□□□□ -1.14
COL4A4-201ENST00000396625 TMEM223A0PJW6 202 aa7.9□□□□□ -1.14
COL4A4-201ENST00000396625 C17orf82Q86X59 251 aaPredicted RBP7.9□□□□□ -1.15
COL4A4-201ENST00000396625 AJUBAQ96IF1 538 aa7.9□□□□□ -1.15
COL4A4-201ENST00000396625 RITA1Q96K30 269 aa7.9□□□□□ -1.15
COL4A4-201ENST00000396625 LINC00694P0DN24 101 aa7.9□□□□□ -1.15
COL4A4-201ENST00000396625 IGHV7-81A0A0B4J1V7 117 aa7.89□□□□□ -1.15
COL4A4-201ENST00000396625 IGLV11-55A0A075B6I3 123 aa7.89□□□□□ -1.15
COL4A4-201ENST00000396625 REG3AQ06141 175 aa7.89□□□□□ -1.15
COL4A4-201ENST00000396625 WFDC13Q8IUB5 93 aa7.89□□□□□ -1.15
COL4A4-201ENST00000396625 CEMP1Q6PRD7 247 aaPredicted RBP7.89□□□□□ -1.15
COL4A4-201ENST00000396625 FAM30AQ9NZY2 134 aa7.89□□□□□ -1.15
COL4A4-201ENST00000396625 P0DMU3 169 aa7.89□□□□□ -1.15
COL4A4-201ENST00000396625 FAM231AP0DMU4 169 aa7.89□□□□□ -1.15
COL4A4-201ENST00000396625 FAM231CP0DMU5 169 aa7.89□□□□□ -1.15
COL4A4-201ENST00000396625 UBE2D4Q9Y2X8 147 aa7.89□□□□□ -1.15
COL4A4-201ENST00000396625 CRYGDP07320 174 aa7.88□□□□□ -1.15
COL4A4-201ENST00000396625 ZFAND3Q9H8U3 227 aa7.88□□□□□ -1.15
COL4A4-201ENST00000396625 IGHV4-61A0A0C4DH41 118 aa7.88□□□□□ -1.15
COL4A4-201ENST00000396625 ZNF503-AS2A6NEH8 195 aa7.88□□□□□ -1.15
COL4A4-201ENST00000396625 PRSS33Q8NF86 280 aa7.88□□□□□ -1.15
COL4A4-201ENST00000396625 HRCT1Q6UXD1 115 aa7.88□□□□□ -1.15
COL4A4-201ENST00000396625 SPRY4Q9C004 299 aa7.88□□□□□ -1.15
COL4A4-201ENST00000396625 ANKRD17O75179 2603 aaKnown RBP7.88□□□□□ -1.15
COL4A4-201ENST00000396625 SPINK6Q6UWN8 80 aa7.88□□□□□ -1.15
COL4A4-201ENST00000396625 C5orf56Q8N8D9 126 aa7.88□□□□□ -1.15
COL4A4-201ENST00000396625 IGLV1-44P01699 117 aa7.87□□□□□ -1.15
COL4A4-201ENST00000396625 THSD7BQ9C0I4 1608 aa7.87□□□□□ -1.15
COL4A4-201ENST00000396625 FAM167A-AS1Q96KT0 104 aa7.87□□□□□ -1.15
COL4A4-201ENST00000396625 ABCA12Q86UK0 2595 aa7.87□□□□□ -1.15
COL4A4-201ENST00000396625 UBE2D3P61077 147 aa7.87□□□□□ -1.15
COL4A4-201ENST00000396625 FAM19A5Q7Z5A7 132 aaPredicted RBP7.87□□□□□ -1.15
COL4A4-201ENST00000396625 DCANP1Q8TF63 244 aa7.87□□□□□ -1.15
COL4A4-201ENST00000396625 RBX1P62877 108 aa7.87□□□□□ -1.15
COL4A4-201ENST00000396625 PRAC2D3DTV9 90 aa7.87□□□□□ -1.15
COL4A4-201ENST00000396625 C20orf203Q8NBC4 194 aa7.87□□□□□ -1.15
COL4A4-201ENST00000396625 COX7CP15954 63 aa7.86□□□□□ -1.15
COL4A4-201ENST00000396625 MIFP14174 115 aa7.86□□□□□ -1.15
COL4A4-201ENST00000396625 PRYO14603 147 aa7.86□□□□□ -1.15
COL4A4-201ENST00000396625 CHCHD10Q8WYQ3 142 aaPredicted RBP7.86□□□□□ -1.15
COL4A4-201ENST00000396625 TRBV6-5A0A0K0K1A5 114 aa7.86□□□□□ -1.15
COL4A4-201ENST00000396625 K7ENP7 123 aa7.86□□□□□ -1.15
COL4A4-201ENST00000396625 M0QXV9 152 aa7.86□□□□□ -1.15
COL4A4-201ENST00000396625 UBE2D1P51668 147 aa7.86□□□□□ -1.15
COL4A4-201ENST00000396625 C22orf34Q6ZV56 151 aa7.86□□□□□ -1.15
COL4A4-201ENST00000396625 LINC00467Q9BRT7 94 aa7.86□□□□□ -1.15
COL4A4-201ENST00000396625 WFDC10AQ9H1F0 79 aa7.85□□□□□ -1.15
COL4A4-201ENST00000396625 H7C423 109 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms