RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 TRGV4A0A0C4DH28 118 aa8.92□□□□□ -0.98
TRIM39-204ENST00000396548 ZNRF2Q8NHG8 242 aa8.92□□□□□ -0.98
TRIM39-204ENST00000396548 HHLA3Q9XRX5 114 aa8.92□□□□□ -0.98
TRIM39-204ENST00000396548 C12orf74Q32Q52 190 aa8.92□□□□□ -0.98
TRIM39-204ENST00000396548 CHCHD7Q9BUK0 85 aa8.92□□□□□ -0.98
TRIM39-204ENST00000396548 PRKDCP78527 4128 aaKnown RBP8.92□□□□□ -0.98
TRIM39-204ENST00000396548 IGIPA6NJ69 53 aa8.91□□□□□ -0.98
TRIM39-204ENST00000396548 C2orf66Q6UXQ4 117 aa8.91□□□□□ -0.98
TRIM39-204ENST00000396548 DYNC2H1Q8NCM8 4307 aaKnown RBP8.91□□□□□ -0.98
TRIM39-204ENST00000396548 TEX48A0A1B0GUV7 120 aa8.91□□□□□ -0.98
TRIM39-204ENST00000396548 DAD1P61803 113 aa8.91□□□□□ -0.98
TRIM39-204ENST00000396548 IFI27L1Q96BM0 104 aa8.91□□□□□ -0.98
TRIM39-204ENST00000396548 MAP1LC3CQ9BXW4 147 aa8.91□□□□□ -0.98
TRIM39-204ENST00000396548 ZMAT4Q9H898 229 aa8.91□□□□□ -0.98
TRIM39-204ENST00000396548 RPL36AP83881 106 aaKnown RBP8.91□□□□□ -0.98
TRIM39-204ENST00000396548 PET117Q6UWS5 81 aa8.91□□□□□ -0.98
TRIM39-204ENST00000396548 C20orf203Q8NBC4 194 aa8.91□□□□□ -0.98
TRIM39-204ENST00000396548 RPL36ALQ969Q0 106 aaKnown RBP8.91□□□□□ -0.98
TRIM39-204ENST00000396548 FAM104AQ969W3 186 aa8.91□□□□□ -0.98
TRIM39-204ENST00000396548 C2orf88Q9BSF0 95 aa8.91□□□□□ -0.98
TRIM39-204ENST00000396548 LINC01545Q5VT33 79 aa8.9□□□□□ -0.98
TRIM39-204ENST00000396548 TEX43Q6ZNM6 134 aa8.9□□□□□ -0.98
TRIM39-204ENST00000396548 NTM-AS1Q6ZSK4 140 aa8.9□□□□□ -0.98
TRIM39-204ENST00000396548 DAZ4Q86SG3 579 aaKnown RBP8.9□□□□□ -0.98
TRIM39-204ENST00000396548 VSIG2Q96IQ7 327 aa8.9□□□□□ -0.98
TRIM39-204ENST00000396548 SPATA25Q9BR10 227 aa8.9□□□□□ -0.98
TRIM39-204ENST00000396548 DAZ3Q9NR90 486 aaKnown RBP8.9□□□□□ -0.98
TRIM39-204ENST00000396548 RPL39P62891 51 aaKnown RBP8.9□□□□□ -0.98
TRIM39-204ENST00000396548 IGHV3-38A0A0C4DH36 116 aa8.89□□□□□ -0.99
TRIM39-204ENST00000396548 GAGE12JA6NER3 117 aa8.89□□□□□ -0.99
TRIM39-204ENST00000396548 SCGB1D1O95968 90 aa8.89□□□□□ -0.99
TRIM39-204ENST00000396548 GAGE1Q13065 139 aa8.89□□□□□ -0.99
TRIM39-204ENST00000396548 GAGE4Q13068 117 aa8.89□□□□□ -0.99
TRIM39-204ENST00000396548 GAGE5Q13069 117 aa8.89□□□□□ -0.99
TRIM39-204ENST00000396548 GAGE13Q4V321 117 aa8.89□□□□□ -0.99
TRIM39-204ENST00000396548 PRO0255Q9UI72 69 aa8.89□□□□□ -0.99
TRIM39-204ENST00000396548 EREGO14944 169 aa8.89□□□□□ -0.99
TRIM39-204ENST00000396548 ZNF25P17030 456 aaPredicted RBP8.89□□□□□ -0.99
TRIM39-204ENST00000396548 DEFB121Q5J5C9 76 aa8.89□□□□□ -0.99
TRIM39-204ENST00000396548 PHLDA1Q8WV24 401 aaPredicted RBP8.89□□□□□ -0.99
TRIM39-204ENST00000396548 GTSF1LQ9H1H1 148 aa8.89□□□□□ -0.99
TRIM39-204ENST00000396548 A0A0J9YWU9 116 aa8.89□□□□□ -0.99
TRIM39-204ENST00000396548 ATP5G1P05496 136 aa8.89□□□□□ -0.99
TRIM39-204ENST00000396548 ERASQ7Z444 233 aa8.89□□□□□ -0.99
TRIM39-204ENST00000396548 PRADC1Q9BSG0 188 aa8.89□□□□□ -0.99
TRIM39-204ENST00000396548 CYSLTR1Q9Y271 337 aa8.89□□□□□ -0.99
TRIM39-204ENST00000396548 LINC01549A6NIU2 74 aa8.88□□□□□ -0.99
TRIM39-204ENST00000396548 ATP5LO75964 103 aa8.88□□□□□ -0.99
TRIM39-204ENST00000396548 CBY1Q9Y3M2 126 aa8.88□□□□□ -0.99
TRIM39-204ENST00000396548 LGALS9CQ6DKI2 356 aa8.87□□□□□ -0.99
TRIM39-204ENST00000396548 TIMM17AQ99595 171 aa8.87□□□□□ -0.99
TRIM39-204ENST00000396548 MEGF8Q7Z7M0 2845 aa8.87□□□□□ -0.99
TRIM39-204ENST00000396548 DNAH7Q8WXX0 4024 aa8.87□□□□□ -0.99
TRIM39-204ENST00000396548 SCGB3A1Q96QR1 104 aa8.87□□□□□ -0.99
TRIM39-204ENST00000396548 PYGO1Q9Y3Y4 419 aa8.87□□□□□ -0.99
TRIM39-204ENST00000396548 COTL1Q14019 142 aa8.86□□□□□ -0.99
TRIM39-204ENST00000396548 ODF1Q14990 250 aa8.86□□□□□ -0.99
TRIM39-204ENST00000396548 MRAPQ8TCY5 172 aa8.86□□□□□ -0.99
TRIM39-204ENST00000396548 BAALCQ8WXS3 180 aa8.86□□□□□ -0.99
TRIM39-204ENST00000396548 TRAV12-1A0A0B4J245 112 aa8.86□□□□□ -0.99
TRIM39-204ENST00000396548 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.86□□□□□ -0.99
TRIM39-204ENST00000396548 ZNF664Q8N3J9 261 aa8.86□□□□□ -0.99
TRIM39-204ENST00000396548 TMEM141Q96I45 108 aa8.86□□□□□ -0.99
TRIM39-204ENST00000396548 GYPEP15421 78 aa8.85□□□□□ -0.99
TRIM39-204ENST00000396548 B9D2Q9BPU9 175 aa8.85□□□□□ -0.99
TRIM39-204ENST00000396548 UBE2D4Q9Y2X8 147 aa8.85□□□□□ -0.99
TRIM39-204ENST00000396548 PAX4O43316 350 aa8.85□□□□□ -0.99
TRIM39-204ENST00000396548 NPSP0C0P6 89 aa8.85□□□□□ -0.99
TRIM39-204ENST00000396548 LBHQ53QV2 105 aaPredicted RBP8.84□□□□□ -0.99
TRIM39-204ENST00000396548 Q6ZTC4 211 aa8.84□□□□□ -0.99
TRIM39-204ENST00000396548 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.83□□□□□ -1
TRIM39-204ENST00000396548 TRAV26-1A0A087WT03 109 aa8.83□□□□□ -1
TRIM39-204ENST00000396548 A0A087WX48 190 aa8.83□□□□□ -1
TRIM39-204ENST00000396548 IGKV2-29A2NJV5 120 aaPredicted RBP8.83□□□□□ -1
TRIM39-204ENST00000396548 PMCHL2Q9BQD1 86 aa8.83□□□□□ -1
TRIM39-204ENST00000396548 IGLV4-3A0A075B6K6 122 aa8.83□□□□□ -1
TRIM39-204ENST00000396548 H0Y8G0 127 aa8.83□□□□□ -1
TRIM39-204ENST00000396548 OPRPNQ99935 248 aaPredicted RBP8.83□□□□□ -1
TRIM39-204ENST00000396548 TIMM21Q9BVV7 248 aa8.83□□□□□ -1
TRIM39-204ENST00000396548 F5H768 121 aa8.83□□□□□ -1
TRIM39-204ENST00000396548 H3BNG1 76 aa8.83□□□□□ -1
TRIM39-204ENST00000396548 MAJINQ3KP22 176 aa8.83□□□□□ -1
TRIM39-204ENST00000396548 MRPL52Q86TS9 123 aaKnown RBP8.83□□□□□ -1
TRIM39-204ENST00000396548 ATOH7Q8N100 152 aa8.83□□□□□ -1
TRIM39-204ENST00000396548 SNHG12Q9BXW3 62 aa8.83□□□□□ -1
TRIM39-204ENST00000396548 NANOS2P60321 138 aaKnown RBP8.82□□□□□ -1
TRIM39-204ENST00000396548 ATP6V0E2Q8NHE4 81 aa8.82□□□□□ -1
TRIM39-204ENST00000396548 AMELXQ99217 191 aa8.82□□□□□ -1
TRIM39-204ENST00000396548 TRBV6-8A0A0A6YYG3 113 aa8.82□□□□□ -1
TRIM39-204ENST00000396548 A0A0J9YY99 117 aa8.82□□□□□ -1
TRIM39-204ENST00000396548 PRSS1P07477 247 aa8.82□□□□□ -1
TRIM39-204ENST00000396548 CEMP1Q6PRD7 247 aaPredicted RBP8.82□□□□□ -1
TRIM39-204ENST00000396548 C11orf45Q8TAV5 145 aa8.82□□□□□ -1
TRIM39-204ENST00000396548 C20orf202A1L168 122 aa8.81□□□□□ -1
TRIM39-204ENST00000396548 Q6ZN92 141 aa8.81□□□□□ -1
TRIM39-204ENST00000396548 CST9LQ9H4G1 147 aa8.81□□□□□ -1
TRIM39-204ENST00000396548 SPANXA1Q9NS26 97 aa8.81□□□□□ -1
TRIM39-204ENST00000396548 CSDC2Q9Y534 153 aaKnown RBP8.81□□□□□ -1
TRIM39-204ENST00000396548 PRSS29PA6NIE9 313 aa8.81□□□□□ -1
TRIM39-204ENST00000396548 ZC2HC1BQ5TFG8 222 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms