RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 ODF1Q14990 250 aa12.4□□□□□ -0.42
TNFSF13-205ENST00000396545 LBHQ53QV2 105 aaPredicted RBP12.4□□□□□ -0.42
TNFSF13-205ENST00000396545 VPS13DQ5THJ4 4388 aa12.4□□□□□ -0.42
TNFSF13-205ENST00000396545 DAZ2Q13117 558 aaKnown RBP12.39□□□□□ -0.43
TNFSF13-205ENST00000396545 SDHAF1A6NFY7 115 aa12.39□□□□□ -0.43
TNFSF13-205ENST00000396545 HERC2O95714 4834 aa12.39□□□□□ -0.43
TNFSF13-205ENST00000396545 SNHG12Q9BXW3 62 aa12.39□□□□□ -0.43
TNFSF13-205ENST00000396545 LINC01549A6NIU2 74 aa12.38□□□□□ -0.43
TNFSF13-205ENST00000396545 M0R143 59 aa12.38□□□□□ -0.43
TNFSF13-205ENST00000396545 EREGO14944 169 aa12.38□□□□□ -0.43
TNFSF13-205ENST00000396545 PRSS1P07477 247 aa12.38□□□□□ -0.43
TNFSF13-205ENST00000396545 AZU1P20160 251 aa12.38□□□□□ -0.43
TNFSF13-205ENST00000396545 G0S2P27469 103 aa12.38□□□□□ -0.43
TNFSF13-205ENST00000396545 Q6ZN92 141 aa12.38□□□□□ -0.43
TNFSF13-205ENST00000396545 C2orf88Q9BSF0 95 aa12.38□□□□□ -0.43
TNFSF13-205ENST00000396545 DKK2Q9UBU2 259 aa12.38□□□□□ -0.43
TNFSF13-205ENST00000396545 H7C1H1 209 aa12.37□□□□□ -0.43
TNFSF13-205ENST00000396545 RHODO00212 210 aa12.37□□□□□ -0.43
TNFSF13-205ENST00000396545 DEFB4AO15263 64 aa12.37□□□□□ -0.43
TNFSF13-205ENST00000396545 HNRNPA3P51991 378 aaKnown RBP12.37□□□□□ -0.43
TNFSF13-205ENST00000396545 C2orf66Q6UXQ4 117 aa12.37□□□□□ -0.43
TNFSF13-205ENST00000396545 NEGR1Q7Z3B1 354 aa12.37□□□□□ -0.43
TNFSF13-205ENST00000396545 KIR2DL4Q99706 377 aa12.37□□□□□ -0.43
TNFSF13-205ENST00000396545 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.36□□□□□ -0.43
TNFSF13-205ENST00000396545 RS1O15537 224 aa12.36□□□□□ -0.43
TNFSF13-205ENST00000396545 CFAP126Q5VTH2 177 aa12.36□□□□□ -0.43
TNFSF13-205ENST00000396545 ZFP2Q6ZN57 461 aa12.36□□□□□ -0.43
TNFSF13-205ENST00000396545 SCGB3A1Q96QR1 104 aa12.36□□□□□ -0.43
TNFSF13-205ENST00000396545 MRPS16Q9Y3D3 137 aaKnown RBP12.36□□□□□ -0.43
TNFSF13-205ENST00000396545 TRAV12-1A0A0B4J245 112 aa12.35□□□□□ -0.43
TNFSF13-205ENST00000396545 Q8NAQ8 132 aa12.35□□□□□ -0.43
TNFSF13-205ENST00000396545 KRTAP17-1Q9BYP8 105 aa12.35□□□□□ -0.43
TNFSF13-205ENST00000396545 A0A087WX48 190 aa12.35□□□□□ -0.43
TNFSF13-205ENST00000396545 CIDEAO60543 219 aa12.35□□□□□ -0.43
TNFSF13-205ENST00000396545 TCTAP57738 103 aa12.35□□□□□ -0.43
TNFSF13-205ENST00000396545 RHOHQ15669 191 aa12.35□□□□□ -0.43
TNFSF13-205ENST00000396545 ANKRD39Q53RE8 183 aa12.35□□□□□ -0.43
TNFSF13-205ENST00000396545 ERASQ7Z444 233 aa12.35□□□□□ -0.43
TNFSF13-205ENST00000396545 MRPL16Q9NX20 251 aaKnown RBP12.35□□□□□ -0.43
TNFSF13-205ENST00000396545 DNAH6Q9C0G6 4158 aa12.34□□□□□ -0.43
TNFSF13-205ENST00000396545 COX8AP10176 69 aa12.34□□□□□ -0.43
TNFSF13-205ENST00000396545 SLC25A34Q6PIV7 304 aa12.34□□□□□ -0.43
TNFSF13-205ENST00000396545 CYSLTR1Q9Y271 337 aa12.34□□□□□ -0.43
TNFSF13-205ENST00000396545 DPM2O94777 84 aa12.33□□□□□ -0.44
TNFSF13-205ENST00000396545 IGKCP01834 107 aa12.33□□□□□ -0.44
TNFSF13-205ENST00000396545 HHLA3Q9XRX5 114 aa12.33□□□□□ -0.44
TNFSF13-205ENST00000396545 PLAC8L1A1L4L8 177 aa12.32□□□□□ -0.44
TNFSF13-205ENST00000396545 TSHBP01222 138 aa12.32□□□□□ -0.44
TNFSF13-205ENST00000396545 IGHV3-53P01767 116 aa12.32□□□□□ -0.44
TNFSF13-205ENST00000396545 NEXN-AS1Q8NBZ9 246 aa12.32□□□□□ -0.44
TNFSF13-205ENST00000396545 TRGV1A0A0A0MS02 117 aa12.31□□□□□ -0.44
TNFSF13-205ENST00000396545 IGHV3-73A0A0B4J1V6 119 aa12.31□□□□□ -0.44
TNFSF13-205ENST00000396545 IGHV4-28A0A0C4DH34 117 aa12.31□□□□□ -0.44
TNFSF13-205ENST00000396545 IGIPA6NJ69 53 aa12.31□□□□□ -0.44
TNFSF13-205ENST00000396545 I3L3M4 83 aa12.31□□□□□ -0.44
TNFSF13-205ENST00000396545 STPG4Q8N801 248 aa12.31□□□□□ -0.44
TNFSF13-205ENST00000396545 BAALCQ8WXS3 180 aa12.31□□□□□ -0.44
TNFSF13-205ENST00000396545 MRPL35Q9NZE8 188 aaKnown RBP12.31□□□□□ -0.44
TNFSF13-205ENST00000396545 APLNQ9ULZ1 77 aa12.31□□□□□ -0.44
TNFSF13-205ENST00000396545 X6R8D5 127 aa12.31□□□□□ -0.44
TNFSF13-205ENST00000396545 Q6ZSN1 163 aa12.3□□□□□ -0.44
TNFSF13-205ENST00000396545 TIMM17AQ99595 171 aa12.3□□□□□ -0.44
TNFSF13-205ENST00000396545 NOP10Q9NPE3 64 aaKnown RBP12.3□□□□□ -0.44
TNFSF13-205ENST00000396545 TRAV4A0A0B4J268 109 aa12.3□□□□□ -0.44
TNFSF13-205ENST00000396545 IGLL5B9A064 214 aa12.3□□□□□ -0.44
TNFSF13-205ENST00000396545 F8VRH5 84 aa12.3□□□□□ -0.44
TNFSF13-205ENST00000396545 FGF6P10767 208 aa12.3□□□□□ -0.44
TNFSF13-205ENST00000396545 MIFP14174 115 aa12.3□□□□□ -0.44
TNFSF13-205ENST00000396545 TMEM141Q96I45 108 aa12.3□□□□□ -0.44
TNFSF13-205ENST00000396545 P0DMU3 169 aa12.29□□□□□ -0.44
TNFSF13-205ENST00000396545 FAM231AP0DMU4 169 aa12.29□□□□□ -0.44
TNFSF13-205ENST00000396545 FAM231CP0DMU5 169 aa12.29□□□□□ -0.44
TNFSF13-205ENST00000396545 PLNP26678 52 aa12.29□□□□□ -0.44
TNFSF13-205ENST00000396545 OR4C5Q8NGB2 326 aa12.29□□□□□ -0.44
TNFSF13-205ENST00000396545 DNAJC30Q96LL9 226 aa12.29□□□□□ -0.44
TNFSF13-205ENST00000396545 TP73-AS1Q9UF72 201 aa12.29□□□□□ -0.44
TNFSF13-205ENST00000396545 NACAE9PAV3 2078 aa12.29□□□□□ -0.44
TNFSF13-205ENST00000396545 KIAA1109Q2LD37 5005 aa12.27□□□□□ -0.44
TNFSF13-205ENST00000396545 LYRM9A8MSI8 78 aa12.27□□□□□ -0.44
TNFSF13-205ENST00000396545 DLEU1O43261 78 aa12.27□□□□□ -0.44
TNFSF13-205ENST00000396545 RPL39P62891 51 aaKnown RBP12.27□□□□□ -0.44
TNFSF13-205ENST00000396545 Q6ZTC4 211 aa12.27□□□□□ -0.44
TNFSF13-205ENST00000396545 Q6ZTI0 123 aa12.27□□□□□ -0.44
TNFSF13-205ENST00000396545 BOD1L2Q8IYS8 172 aa12.27□□□□□ -0.44
TNFSF13-205ENST00000396545 CHTOPQ9Y3Y2 248 aaKnown RBP12.27□□□□□ -0.44
TNFSF13-205ENST00000396545 TNFRSF18Q9Y5U5 241 aa12.27□□□□□ -0.44
TNFSF13-205ENST00000396545 LINC00612Q8N6U2 182 aa12.26□□□□□ -0.45
TNFSF13-205ENST00000396545 C20orf203Q8NBC4 194 aa12.26□□□□□ -0.45
TNFSF13-205ENST00000396545 TRAV10A0A0B4J240 114 aa12.26□□□□□ -0.45
TNFSF13-205ENST00000396545 PRSS29PA6NIE9 313 aa12.26□□□□□ -0.45
TNFSF13-205ENST00000396545 C2orf91Q6ZV80 131 aa12.26□□□□□ -0.45
TNFSF13-205ENST00000396545 DEFB104AQ8WTQ1 72 aa12.26□□□□□ -0.45
TNFSF13-205ENST00000396545 PCLOQ9Y6V0 5065 aa12.25□□□□□ -0.45
TNFSF13-205ENST00000396545 TRGV2A0A075B6R0 118 aa12.25□□□□□ -0.45
TNFSF13-205ENST00000396545 ZC2HC1BQ5TFG8 222 aa12.25□□□□□ -0.45
TNFSF13-205ENST00000396545 Q9UF83 564 aa12.25□□□□□ -0.45
TNFSF13-205ENST00000396545 IGKV2D-26A0A0A0MRZ7 120 aa12.23□□□□□ -0.45
TNFSF13-205ENST00000396545 TEX48A0A1B0GUV7 120 aa12.23□□□□□ -0.45
TNFSF13-205ENST00000396545 GAGE12BA1L429 117 aa12.23□□□□□ -0.45
TNFSF13-205ENST00000396545 GAGE7O76087 117 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms