RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 DGAT2L7PQ6IED9 249 aa11.59□□□□□ -0.55
CXCL12-204ENST00000395793 WDR73Q6P4I2 378 aa11.59□□□□□ -0.55
CXCL12-204ENST00000395793 RPP21Q9H633 154 aaKnown RBP11.59□□□□□ -0.55
CXCL12-204ENST00000395793 TRAV26-2A0A0B4J265 109 aa11.58□□□□□ -0.56
CXCL12-204ENST00000395793 GATD1Q8NB37 220 aa11.58□□□□□ -0.56
CXCL12-204ENST00000395793 GTSF1Q8WW33 167 aa11.58□□□□□ -0.56
CXCL12-204ENST00000395793 PKHD1L1Q86WI1 4243 aa11.57□□□□□ -0.56
CXCL12-204ENST00000395793 TWIST1Q15672 202 aa11.57□□□□□ -0.56
CXCL12-204ENST00000395793 SDIM1Q6ZPB5 146 aa11.57□□□□□ -0.56
CXCL12-204ENST00000395793 SLPIP03973 132 aa11.56□□□□□ -0.56
CXCL12-204ENST00000395793 TAGLN2P37802 199 aaKnown RBP11.56□□□□□ -0.56
CXCL12-204ENST00000395793 AMTP48728 403 aa11.56□□□□□ -0.56
CXCL12-204ENST00000395793 HNRNPA3P51991 378 aaKnown RBP11.56□□□□□ -0.56
CXCL12-204ENST00000395793 FOXA3P55318 350 aaPredicted RBP11.56□□□□□ -0.56
CXCL12-204ENST00000395793 COTL1Q14019 142 aa11.56□□□□□ -0.56
CXCL12-204ENST00000395793 Q6ZNX1 250 aa11.56□□□□□ -0.56
CXCL12-204ENST00000395793 FAT3Q8TDW7 4589 aa11.56□□□□□ -0.56
CXCL12-204ENST00000395793 RPL39LQ96EH5 51 aaKnown RBP11.56□□□□□ -0.56
CXCL12-204ENST00000395793 TRAV8-4A0A0B4J246 113 aa11.55□□□□□ -0.56
CXCL12-204ENST00000395793 RPL37AP61513 92 aaKnown RBP11.54□□□□□ -0.56
CXCL12-204ENST00000395793 CNBPP62633 177 aaKnown RBP11.54□□□□□ -0.56
CXCL12-204ENST00000395793 ALKAL2Q6UX46 152 aa11.54□□□□□ -0.56
CXCL12-204ENST00000395793 CLRN3Q8NCR9 226 aa11.54□□□□□ -0.56
CXCL12-204ENST00000395793 hDV102S1A0JD36 115 aa11.53□□□□□ -0.56
CXCL12-204ENST00000395793 UBE2L6O14933 153 aa11.53□□□□□ -0.56
CXCL12-204ENST00000395793 CIRBPQ14011 172 aaKnown RBP11.52□□□□□ -0.57
CXCL12-204ENST00000395793 C15orf56Q8N910 161 aa11.52□□□□□ -0.57
CXCL12-204ENST00000395793 TMEM250H0YL14 139 aa11.51□□□□□ -0.57
CXCL12-204ENST00000395793 AKAP14Q86UN6 197 aa11.51□□□□□ -0.57
CXCL12-204ENST00000395793 LYPD6BQ8NI32 183 aa11.51□□□□□ -0.57
CXCL12-204ENST00000395793 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.5□□□□□ -0.57
CXCL12-204ENST00000395793 IGKV2-29A2NJV5 120 aaPredicted RBP11.5□□□□□ -0.57
CXCL12-204ENST00000395793 GATCO43716 136 aaKnown RBP11.5□□□□□ -0.57
CXCL12-204ENST00000395793 FAM231DQ6ZW35 169 aa11.5□□□□□ -0.57
CXCL12-204ENST00000395793 hCG_2014768A0A024R1R8 64 aa11.49□□□□□ -0.57
CXCL12-204ENST00000395793 IGKV3OR2-268A0A0C4DH90 116 aa11.49□□□□□ -0.57
CXCL12-204ENST00000395793 GAGE12HA6NDE8 117 aa11.49□□□□□ -0.57
CXCL12-204ENST00000395793 GAS8-AS1O95177 125 aa11.49□□□□□ -0.57
CXCL12-204ENST00000395793 OXTP01178 125 aa11.49□□□□□ -0.57
CXCL12-204ENST00000395793 CHTF8P0CG12 524 aa11.49□□□□□ -0.57
CXCL12-204ENST00000395793 SDHAF1A6NFY7 115 aa11.48□□□□□ -0.57
CXCL12-204ENST00000395793 BLOC1S1P78537 153 aa11.48□□□□□ -0.57
CXCL12-204ENST00000395793 NCR2O95944 276 aa11.47□□□□□ -0.57
CXCL12-204ENST00000395793 CEBPGP53567 150 aa11.47□□□□□ -0.57
CXCL12-204ENST00000395793 AP5S1Q9NUS5 200 aa11.47□□□□□ -0.57
CXCL12-204ENST00000395793 IGHV3-64A0A075B6Q5 118 aa11.46□□□□□ -0.57
CXCL12-204ENST00000395793 FAM231BA6NCW3 169 aa11.46□□□□□ -0.57
CXCL12-204ENST00000395793 A8MWL6 223 aa11.46□□□□□ -0.57
CXCL12-204ENST00000395793 APCSP02743 223 aa11.46□□□□□ -0.57
CXCL12-204ENST00000395793 CT83Q5H943 113 aa11.46□□□□□ -0.57
CXCL12-204ENST00000395793 SMIM15Q7Z3B0 74 aa11.46□□□□□ -0.57
CXCL12-204ENST00000395793 FGF6P10767 208 aa11.45□□□□□ -0.58
CXCL12-204ENST00000395793 HIGD2BQ4VC39 106 aa11.45□□□□□ -0.58
CXCL12-204ENST00000395793 AMMECR1LQ6DCA0 310 aa11.45□□□□□ -0.58
CXCL12-204ENST00000395793 RNASEKQ6P5S7 137 aaKnown RBP11.45□□□□□ -0.58
CXCL12-204ENST00000395793 SPACA4Q8TDM5 124 aa11.45□□□□□ -0.58
CXCL12-204ENST00000395793 CHCHD10Q8WYQ3 142 aaPredicted RBP11.45□□□□□ -0.58
CXCL12-204ENST00000395793 A0A087WYN8 130 aa11.44□□□□□ -0.58
CXCL12-204ENST00000395793 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.44□□□□□ -0.58
CXCL12-204ENST00000395793 TRBV6-5A0A0K0K1A5 114 aa11.44□□□□□ -0.58
CXCL12-204ENST00000395793 TEX261Q6UWH6 196 aa11.44□□□□□ -0.58
CXCL12-204ENST00000395793 LINC01551Q86U37 167 aa11.44□□□□□ -0.58
CXCL12-204ENST00000395793 H7C423 109 aa11.43□□□□□ -0.58
CXCL12-204ENST00000395793 TSHBP01222 138 aa11.43□□□□□ -0.58
CXCL12-204ENST00000395793 RNF185Q96GF1 192 aa11.43□□□□□ -0.58
CXCL12-204ENST00000395793 SMIM7Q9BQ49 75 aa11.43□□□□□ -0.58
CXCL12-204ENST00000395793 HIGD1CA8MV81 97 aa11.42□□□□□ -0.58
CXCL12-204ENST00000395793 I3L3M4 83 aa11.42□□□□□ -0.58
CXCL12-204ENST00000395793 ESDP10768 282 aa11.42□□□□□ -0.58
CXCL12-204ENST00000395793 RPS10P46783 165 aaKnown RBP11.42□□□□□ -0.58
CXCL12-204ENST00000395793 FOXI1Q12951 378 aa11.42□□□□□ -0.58
CXCL12-204ENST00000395793 TMEM242Q9NWH2 141 aa11.42□□□□□ -0.58
CXCL12-204ENST00000395793 SRP19P09132 144 aaKnown RBP11.41□□□□□ -0.58
CXCL12-204ENST00000395793 PMCHP20382 165 aa11.41□□□□□ -0.58
CXCL12-204ENST00000395793 TSKUQ8WUA8 353 aa11.41□□□□□ -0.58
CXCL12-204ENST00000395793 FAM210AQ96ND0 272 aa11.41□□□□□ -0.58
CXCL12-204ENST00000395793 EIF5A2Q9GZV4 153 aaKnown RBP11.41□□□□□ -0.58
CXCL12-204ENST00000395793 GVQW2A0A096LPI5 108 aaPredicted RBP11.4□□□□□ -0.58
CXCL12-204ENST00000395793 A0A1B0GUT8 65 aa11.4□□□□□ -0.58
CXCL12-204ENST00000395793 ZNF25P17030 456 aaPredicted RBP11.4□□□□□ -0.58
CXCL12-204ENST00000395793 COX6A2Q02221 97 aa11.4□□□□□ -0.58
CXCL12-204ENST00000395793 CFAP161Q6P656 301 aa11.4□□□□□ -0.58
CXCL12-204ENST00000395793 OR5A1Q8NGJ0 315 aa11.4□□□□□ -0.58
CXCL12-204ENST00000395793 PRSS3P2Q8NHM4 247 aa11.4□□□□□ -0.58
CXCL12-204ENST00000395793 TMEM191AQ9H0A3 160 aa11.4□□□□□ -0.58
CXCL12-204ENST00000395793 OSTCQ9NRP0 149 aa11.4□□□□□ -0.58
CXCL12-204ENST00000395793 PLAC8Q9NZF1 115 aa11.4□□□□□ -0.58
CXCL12-204ENST00000395793 NDUFS6O75380 124 aaKnown RBP11.39□□□□□ -0.59
CXCL12-204ENST00000395793 MT1HL1P0DM35 61 aa11.39□□□□□ -0.59
CXCL12-204ENST00000395793 RAB4AP20338 218 aa11.39□□□□□ -0.59
CXCL12-204ENST00000395793 POLR2KP53803 58 aaKnown RBP11.39□□□□□ -0.59
CXCL12-204ENST00000395793 SERTAD4-AS1Q5TG53 156 aa11.39□□□□□ -0.59
CXCL12-204ENST00000395793 AMN1Q8IY45 258 aa11.39□□□□□ -0.59
CXCL12-204ENST00000395793 ST20Q9HBF5 79 aa11.39□□□□□ -0.59
CXCL12-204ENST00000395793 V9GYV3 84 aa11.39□□□□□ -0.59
CXCL12-204ENST00000395793 HMCN2Q8NDA2 5059 aa11.39□□□□□ -0.59
CXCL12-204ENST00000395793 LINC00959A0A1B0GUT2 108 aa11.38□□□□□ -0.59
CXCL12-204ENST00000395793 ZNF727A8MUV8 499 aa11.38□□□□□ -0.59
CXCL12-204ENST00000395793 BORCS7Q96B45 105 aa11.38□□□□□ -0.59
CXCL12-204ENST00000395793 DPH3Q96FX2 82 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms