RNA–Protein interactions for RNA: ENST00000395721.6

PTPN20-205, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 2,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-205ENST00000395721 NPYP01303 97 aa6.4□□□□□ -1.38
PTPN20-205ENST00000395721 Q8NAQ8 132 aa6.4□□□□□ -1.38
PTPN20-205ENST00000395721 ATP6V0E2Q8NHE4 81 aa6.4□□□□□ -1.38
PTPN20-205ENST00000395721 TRAV4A0A0B4J268 109 aa6.4□□□□□ -1.39
PTPN20-205ENST00000395721 J3KRW8 73 aa6.4□□□□□ -1.39
PTPN20-205ENST00000395721 GIG44P09565 113 aaPredicted RBP6.4□□□□□ -1.39
PTPN20-205ENST00000395721 HLA-DRB4P13762 266 aa6.4□□□□□ -1.39
PTPN20-205ENST00000395721 GAGE2BQ13066 116 aa6.4□□□□□ -1.39
PTPN20-205ENST00000395721 MRPL51Q4U2R6 128 aaKnown RBP6.4□□□□□ -1.39
PTPN20-205ENST00000395721 GAGE2EQ4V326 116 aa6.4□□□□□ -1.39
PTPN20-205ENST00000395721 FAM159AQ6UWV7 190 aa6.4□□□□□ -1.39
PTPN20-205ENST00000395721 ORMDL3Q8N138 153 aa6.4□□□□□ -1.39
PTPN20-205ENST00000395721 EXOC3-AS1Q8N2X6 119 aa6.4□□□□□ -1.39
PTPN20-205ENST00000395721 OR1L4Q8NGR5 311 aa6.4□□□□□ -1.39
PTPN20-205ENST00000395721 GAGE2DQ9UEU5 116 aa6.4□□□□□ -1.39
PTPN20-205ENST00000395721 HLA-DRB4X5D2U9 266 aa6.4□□□□□ -1.39
PTPN20-205ENST00000395721 DNAH1Q9P2D7 4330 aa6.39□□□□□ -1.39
PTPN20-205ENST00000395721 H3BMM0 161 aa6.39□□□□□ -1.39
PTPN20-205ENST00000395721 M0QXV9 152 aa6.39□□□□□ -1.39
PTPN20-205ENST00000395721 RHODO00212 210 aa6.39□□□□□ -1.39
PTPN20-205ENST00000395721 LEPP41159 167 aa6.39□□□□□ -1.39
PTPN20-205ENST00000395721 Q86TA4 180 aa6.39□□□□□ -1.39
PTPN20-205ENST00000395721 XCL2Q9UBD3 114 aa6.39□□□□□ -1.39
PTPN20-205ENST00000395721 GAS8-AS1O95177 125 aa6.39□□□□□ -1.39
PTPN20-205ENST00000395721 CKS2P33552 79 aa6.39□□□□□ -1.39
PTPN20-205ENST00000395721 TTC32Q5I0X7 151 aa6.39□□□□□ -1.39
PTPN20-205ENST00000395721 FAM104BQ5XKR9 115 aa6.39□□□□□ -1.39
PTPN20-205ENST00000395721 LYZL1Q6UWQ5 148 aa6.39□□□□□ -1.39
PTPN20-205ENST00000395721 LINC01549A6NIU2 74 aa6.38□□□□□ -1.39
PTPN20-205ENST00000395721 IGKV3-20P01619 116 aa6.38□□□□□ -1.39
PTPN20-205ENST00000395721 RBMY1A1P0DJD3 496 aaKnown RBP6.38□□□□□ -1.39
PTPN20-205ENST00000395721 RBMY1CP0DJD4 496 aa6.38□□□□□ -1.39
PTPN20-205ENST00000395721 RBMY1FQ15415 496 aaKnown RBP6.38□□□□□ -1.39
PTPN20-205ENST00000395721 X6R8D5 127 aa6.38□□□□□ -1.39
PTPN20-205ENST00000395721 IGLV2-11P01706 119 aa6.38□□□□□ -1.39
PTPN20-205ENST00000395721 EVI2AP22794 236 aa6.38□□□□□ -1.39
PTPN20-205ENST00000395721 HLA-DMBP28068 263 aa6.38□□□□□ -1.39
PTPN20-205ENST00000395721 CRIP1P50238 77 aa6.38□□□□□ -1.39
PTPN20-205ENST00000395721 TEN1Q86WV5 123 aa6.38□□□□□ -1.39
PTPN20-205ENST00000395721 C16orf92Q96LL3 132 aa6.38□□□□□ -1.39
PTPN20-205ENST00000395721 TRAV10A0A0B4J240 114 aa6.37□□□□□ -1.39
PTPN20-205ENST00000395721 DPM2O94777 84 aa6.37□□□□□ -1.39
PTPN20-205ENST00000395721 IFITM1P13164 125 aa6.37□□□□□ -1.39
PTPN20-205ENST00000395721 Q6ZQT7 251 aa6.37□□□□□ -1.39
PTPN20-205ENST00000395721 MRPL35Q9NZE8 188 aaKnown RBP6.37□□□□□ -1.39
PTPN20-205ENST00000395721 TRBV7-3A0A075B6L6 115 aa6.37□□□□□ -1.39
PTPN20-205ENST00000395721 MEIG1Q5JSS6 88 aa6.37□□□□□ -1.39
PTPN20-205ENST00000395721 SOCS3O14543 225 aa6.36□□□□□ -1.39
PTPN20-205ENST00000395721 DEFB1P60022 68 aa6.36□□□□□ -1.39
PTPN20-205ENST00000395721 TAL2Q16559 108 aa6.36□□□□□ -1.39
PTPN20-205ENST00000395721 ANKRD29Q8N6D5 301 aa6.36□□□□□ -1.39
PTPN20-205ENST00000395721 CSNK1G2-AS1Q8NCQ2 148 aa6.36□□□□□ -1.39
PTPN20-205ENST00000395721 HIGD1AQ9Y241 93 aa6.36□□□□□ -1.39
PTPN20-205ENST00000395721 SNCGO76070 127 aa6.36□□□□□ -1.39
PTPN20-205ENST00000395721 ZNF493Q6ZR52 646 aa6.36□□□□□ -1.39
PTPN20-205ENST00000395721 IGHV3OR16-12A0A075B7B8 117 aa6.35□□□□□ -1.39
PTPN20-205ENST00000395721 TRAV8-2A0A0B4J237 113 aa6.35□□□□□ -1.39
PTPN20-205ENST00000395721 GATD1Q8NB37 220 aa6.35□□□□□ -1.39
PTPN20-205ENST00000395721 MAP1LC3AQ9H492 121 aa6.35□□□□□ -1.39
PTPN20-205ENST00000395721 A8MWV9 139 aa6.35□□□□□ -1.39
PTPN20-205ENST00000395721 H3BRN7 92 aa6.35□□□□□ -1.39
PTPN20-205ENST00000395721 GATA1P15976 413 aaPredicted RBP6.35□□□□□ -1.39
PTPN20-205ENST00000395721 Q6ZTC4 211 aa6.35□□□□□ -1.39
PTPN20-205ENST00000395721 C17orf77Q96MU5 243 aa6.35□□□□□ -1.39
PTPN20-205ENST00000395721 C8orf49Q96NF6 230 aa6.35□□□□□ -1.39
PTPN20-205ENST00000395721 A0A0J9YX75 114 aa6.35□□□□□ -1.39
PTPN20-205ENST00000395721 SMIM9A6NGZ8 99 aa6.35□□□□□ -1.39
PTPN20-205ENST00000395721 DUSP14O95147 198 aaKnown RBP6.35□□□□□ -1.39
PTPN20-205ENST00000395721 TCL1BO95988 128 aa6.35□□□□□ -1.39
PTPN20-205ENST00000395721 RPL7P18124 248 aaKnown RBP6.35□□□□□ -1.39
PTPN20-205ENST00000395721 TWIST1Q15672 202 aa6.35□□□□□ -1.39
PTPN20-205ENST00000395721 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.35□□□□□ -1.39
PTPN20-205ENST00000395721 SHANK2-AS3Q9BTD1 123 aa6.35□□□□□ -1.39
PTPN20-205ENST00000395721 MSRB1Q9NZV6 116 aa6.35□□□□□ -1.39
PTPN20-205ENST00000395721 CELA1Q9UNI1 258 aa6.35□□□□□ -1.39
PTPN20-205ENST00000395721 CSMD3Q7Z407 3707 aa6.34□□□□□ -1.39
PTPN20-205ENST00000395721 TMEM262E9PQX1 116 aa6.34□□□□□ -1.39
PTPN20-205ENST00000395721 F6UB75 175 aa6.34□□□□□ -1.39
PTPN20-205ENST00000395721 SLC25A39Q9BZJ4 359 aaPredicted RBP6.34□□□□□ -1.39
PTPN20-205ENST00000395721 MYMXA0A1B0GTQ4 84 aa6.34□□□□□ -1.4
PTPN20-205ENST00000395721 EMP1P54849 157 aa6.34□□□□□ -1.4
PTPN20-205ENST00000395721 C20orf173Q96LM9 149 aa6.34□□□□□ -1.4
PTPN20-205ENST00000395721 DEFB131BA0A096LNP1 70 aa6.33□□□□□ -1.4
PTPN20-205ENST00000395721 SPART-AS1P0CW21 52 aa6.33□□□□□ -1.4
PTPN20-205ENST00000395721 VCX2Q9H322 139 aa6.33□□□□□ -1.4
PTPN20-205ENST00000395721 APLNQ9ULZ1 77 aa6.33□□□□□ -1.4
PTPN20-205ENST00000395721 IGHV4-4A0A075B6R2 117 aa6.33□□□□□ -1.4
PTPN20-205ENST00000395721 OTORQ9NRC9 128 aa6.33□□□□□ -1.4
PTPN20-205ENST00000395721 SCGB1C2P0DMR2 95 aa6.32□□□□□ -1.4
PTPN20-205ENST00000395721 SRSF9Q13242 221 aaKnown RBP eCLIP6.32□□□□□ -1.4
PTPN20-205ENST00000395721 BIRC6Q9NR09 4857 aa6.32□□□□□ -1.4
PTPN20-205ENST00000395721 M0R3E3 92 aa6.32□□□□□ -1.4
PTPN20-205ENST00000395721 ATP5LO75964 103 aa6.32□□□□□ -1.4
PTPN20-205ENST00000395721 INSP01308 110 aa6.32□□□□□ -1.4
PTPN20-205ENST00000395721 LYSTQ99698 3801 aa6.32□□□□□ -1.4
PTPN20-205ENST00000395721 A8MTW9 85 aa6.31□□□□□ -1.4
PTPN20-205ENST00000395721 UBE2D3P61077 147 aa6.31□□□□□ -1.4
PTPN20-205ENST00000395721 UBE2D2P62837 147 aa6.31□□□□□ -1.4
PTPN20-205ENST00000395721 IGFL4Q6B9Z1 124 aa6.31□□□□□ -1.4
PTPN20-205ENST00000395721 RNF182Q8N6D2 247 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms