RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 ZNF815PA8K554 130 aa11.29□□□□□ -0.6
RAPGEF3-203ENST00000395360 ZNF415Q09FC8 603 aa11.29□□□□□ -0.6
RAPGEF3-203ENST00000395360 UFSP1Q6NVU6 142 aa11.29□□□□□ -0.6
RAPGEF3-203ENST00000395360 NACAE9PAV3 2078 aa11.29□□□□□ -0.6
RAPGEF3-203ENST00000395360 A0A1B0GV72 72 aa11.29□□□□□ -0.6
RAPGEF3-203ENST00000395360 A6NJY4 79 aa11.29□□□□□ -0.6
RAPGEF3-203ENST00000395360 CCL24O00175 119 aa11.29□□□□□ -0.6
RAPGEF3-203ENST00000395360 SCGB1A1P11684 91 aa11.29□□□□□ -0.6
RAPGEF3-203ENST00000395360 FHL3Q13643 280 aa11.29□□□□□ -0.6
RAPGEF3-203ENST00000395360 SAMD5Q5TGI4 173 aa11.29□□□□□ -0.6
RAPGEF3-203ENST00000395360 C20orf203Q8NBC4 194 aa11.29□□□□□ -0.6
RAPGEF3-203ENST00000395360 ZNRF2Q8NHG8 242 aa11.29□□□□□ -0.6
RAPGEF3-203ENST00000395360 PHLDA1Q8WV24 401 aaPredicted RBP11.29□□□□□ -0.6
RAPGEF3-203ENST00000395360 A8MWV9 139 aa11.28□□□□□ -0.6
RAPGEF3-203ENST00000395360 K7EP34 96 aa11.28□□□□□ -0.6
RAPGEF3-203ENST00000395360 ODF3L2Q3SX64 289 aa11.28□□□□□ -0.6
RAPGEF3-203ENST00000395360 TMEM170BQ5T4T1 132 aa11.28□□□□□ -0.6
RAPGEF3-203ENST00000395360 TRBV7-3A0A075B6L6 115 aa11.27□□□□□ -0.6
RAPGEF3-203ENST00000395360 INSP01308 110 aa11.27□□□□□ -0.6
RAPGEF3-203ENST00000395360 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.27□□□□□ -0.6
RAPGEF3-203ENST00000395360 CITED2Q99967 270 aaPredicted RBP11.27□□□□□ -0.6
RAPGEF3-203ENST00000395360 HERVK_113P61574 105 aa11.27□□□□□ -0.61
RAPGEF3-203ENST00000395360 SCGB1D4Q6XE38 83 aa11.27□□□□□ -0.61
RAPGEF3-203ENST00000395360 C11orf72Q8NBR9 251 aa11.27□□□□□ -0.61
RAPGEF3-203ENST00000395360 EDA2RQ9HAV5 297 aa11.27□□□□□ -0.61
RAPGEF3-203ENST00000395360 SPCS1Q9Y6A9 102 aa11.27□□□□□ -0.61
RAPGEF3-203ENST00000395360 FABP2P12104 132 aa11.26□□□□□ -0.61
RAPGEF3-203ENST00000395360 XCL2Q9UBD3 114 aa11.26□□□□□ -0.61
RAPGEF3-203ENST00000395360 Q9UF83 564 aa11.26□□□□□ -0.61
RAPGEF3-203ENST00000395360 NOTCH3Q9UM47 2321 aa11.26□□□□□ -0.61
RAPGEF3-203ENST00000395360 CFAP126Q5VTH2 177 aa11.26□□□□□ -0.61
RAPGEF3-203ENST00000395360 PLEKHB2Q96CS7 222 aa11.26□□□□□ -0.61
RAPGEF3-203ENST00000395360 ATRQ13535 2644 aa11.25□□□□□ -0.61
RAPGEF3-203ENST00000395360 Q6ZSN1 163 aa11.25□□□□□ -0.61
RAPGEF3-203ENST00000395360 STHQ8IWL8 128 aa11.25□□□□□ -0.61
RAPGEF3-203ENST00000395360 TNFRSF18Q9Y5U5 241 aa11.25□□□□□ -0.61
RAPGEF3-203ENST00000395360 TRAV25A0A0B4J276 109 aa11.25□□□□□ -0.61
RAPGEF3-203ENST00000395360 C12orf74Q32Q52 190 aa11.25□□□□□ -0.61
RAPGEF3-203ENST00000395360 PIK3CD-AS1Q5SR53 167 aa11.25□□□□□ -0.61
RAPGEF3-203ENST00000395360 MRPL16Q9NX20 251 aaKnown RBP11.25□□□□□ -0.61
RAPGEF3-203ENST00000395360 KRTAP24-1Q3LI83 254 aa11.24□□□□□ -0.61
RAPGEF3-203ENST00000395360 LINC00467Q9BRT7 94 aa11.24□□□□□ -0.61
RAPGEF3-203ENST00000395360 IGHV3OR16-12A0A075B7B8 117 aa11.24□□□□□ -0.61
RAPGEF3-203ENST00000395360 TSSC4Q9Y5U2 329 aaPredicted RBP11.24□□□□□ -0.61
RAPGEF3-203ENST00000395360 IGLV4-3A0A075B6K6 122 aa11.23□□□□□ -0.61
RAPGEF3-203ENST00000395360 AZU1P20160 251 aa11.23□□□□□ -0.61
RAPGEF3-203ENST00000395360 TSPEAR-AS2P59090 65 aa11.23□□□□□ -0.61
RAPGEF3-203ENST00000395360 NFE4Q86UQ8 179 aa11.23□□□□□ -0.61
RAPGEF3-203ENST00000395360 PTH2Q96A98 100 aa11.23□□□□□ -0.61
RAPGEF3-203ENST00000395360 SPXQ9BT56 116 aa11.23□□□□□ -0.61
RAPGEF3-203ENST00000395360 VCX2Q9H322 139 aa11.23□□□□□ -0.61
RAPGEF3-203ENST00000395360 SRSF9Q13242 221 aaKnown RBP eCLIP11.22□□□□□ -0.61
RAPGEF3-203ENST00000395360 IGLL5B9A064 214 aa11.21□□□□□ -0.61
RAPGEF3-203ENST00000395360 OR5A1Q8NGJ0 315 aa11.21□□□□□ -0.61
RAPGEF3-203ENST00000395360 RHODO00212 210 aa11.21□□□□□ -0.62
RAPGEF3-203ENST00000395360 C1orf158Q8N1D5 194 aa11.21□□□□□ -0.62
RAPGEF3-203ENST00000395360 BEAN1Q3B7T3 259 aa11.2□□□□□ -0.62
RAPGEF3-203ENST00000395360 CEMP1Q6PRD7 247 aaPredicted RBP11.2□□□□□ -0.62
RAPGEF3-203ENST00000395360 A0A0J9YXV3 536 aa11.2□□□□□ -0.62
RAPGEF3-203ENST00000395360 A0A0J9YY99 117 aa11.2□□□□□ -0.62
RAPGEF3-203ENST00000395360 ZNF479Q96JC4 524 aa11.2□□□□□ -0.62
RAPGEF3-203ENST00000395360 J3QQQ9 107 aa11.19□□□□□ -0.62
RAPGEF3-203ENST00000395360 IGHV3-53P01767 116 aa11.19□□□□□ -0.62
RAPGEF3-203ENST00000395360 PYGO1Q9Y3Y4 419 aa11.19□□□□□ -0.62
RAPGEF3-203ENST00000395360 A0A1B0GWB2 263 aa11.19□□□□□ -0.62
RAPGEF3-203ENST00000395360 ZNF22P17026 224 aaPredicted RBP11.19□□□□□ -0.62
RAPGEF3-203ENST00000395360 FAM104AQ969W3 186 aa11.19□□□□□ -0.62
RAPGEF3-203ENST00000395360 IGHV3-64A0A075B6Q5 118 aa11.18□□□□□ -0.62
RAPGEF3-203ENST00000395360 IGHV3-38A0A0C4DH36 116 aa11.18□□□□□ -0.62
RAPGEF3-203ENST00000395360 TMEM223A0PJW6 202 aa11.18□□□□□ -0.62
RAPGEF3-203ENST00000395360 RS1O15537 224 aa11.18□□□□□ -0.62
RAPGEF3-203ENST00000395360 LGALS3P17931 250 aaKnown RBP11.18□□□□□ -0.62
RAPGEF3-203ENST00000395360 RNASE13Q5GAN3 156 aaKnown RBP11.18□□□□□ -0.62
RAPGEF3-203ENST00000395360 AMELXQ99217 191 aa11.18□□□□□ -0.62
RAPGEF3-203ENST00000395360 CHCHD7Q9BUK0 85 aa11.18□□□□□ -0.62
RAPGEF3-203ENST00000395360 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.17□□□□□ -0.62
RAPGEF3-203ENST00000395360 TRGV1A0A0A0MS02 117 aa11.17□□□□□ -0.62
RAPGEF3-203ENST00000395360 IGKV2-29A2NJV5 120 aaPredicted RBP11.17□□□□□ -0.62
RAPGEF3-203ENST00000395360 SIGMAR1Q99720 223 aa11.17□□□□□ -0.62
RAPGEF3-203ENST00000395360 RRN3P1Q2M238 152 aa11.16□□□□□ -0.62
RAPGEF3-203ENST00000395360 DNAJC30Q96LL9 226 aa11.16□□□□□ -0.62
RAPGEF3-203ENST00000395360 LEPROTO15243 131 aa11.15□□□□□ -0.62
RAPGEF3-203ENST00000395360 SLC25A29Q8N8R3 303 aa11.15□□□□□ -0.62
RAPGEF3-203ENST00000395360 IL17DQ8TAD2 202 aa11.15□□□□□ -0.62
RAPGEF3-203ENST00000395360 WFDC10AQ9H1F0 79 aa11.15□□□□□ -0.62
RAPGEF3-203ENST00000395360 UBE2D4Q9Y2X8 147 aa11.15□□□□□ -0.62
RAPGEF3-203ENST00000395360 KRTAP10-3P60369 221 aa11.14□□□□□ -0.63
RAPGEF3-203ENST00000395360 SMAGPQ0VAQ4 97 aa11.14□□□□□ -0.63
RAPGEF3-203ENST00000395360 CITED1Q99966 193 aa11.14□□□□□ -0.63
RAPGEF3-203ENST00000395360 UBE2D1P51668 147 aa11.14□□□□□ -0.63
RAPGEF3-203ENST00000395360 CRYBA4P53673 196 aa11.14□□□□□ -0.63
RAPGEF3-203ENST00000395360 MRPS36P82909 103 aaKnown RBP11.14□□□□□ -0.63
RAPGEF3-203ENST00000395360 GTSF1LQ9H1H1 148 aa11.14□□□□□ -0.63
RAPGEF3-203ENST00000395360 SPANXB1Q9NS25 103 aaPredicted RBP11.14□□□□□ -0.63
RAPGEF3-203ENST00000395360 PGPEP1Q9NXJ5 209 aa11.14□□□□□ -0.63
RAPGEF3-203ENST00000395360 IGHV3-30P01768 117 aa11.13□□□□□ -0.63
RAPGEF3-203ENST00000395360 IGHV3-30-5P0DP03 117 aa11.13□□□□□ -0.63
RAPGEF3-203ENST00000395360 NDUFA11Q86Y39 141 aa11.13□□□□□ -0.63
RAPGEF3-203ENST00000395360 TMEM263Q8WUH6 116 aaKnown RBP11.13□□□□□ -0.63
RAPGEF3-203ENST00000395360 SPANXA1Q9NS26 97 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms