RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 XKRY2A2RUG3 117 aa12.26□□□□□ -0.45
COL11A2-204ENST00000395194 SULT1A2P50226 295 aa12.26□□□□□ -0.45
COL11A2-204ENST00000395194 PGLYRP4Q96LB8 373 aa12.26□□□□□ -0.45
COL11A2-204ENST00000395194 MED9Q9NWA0 146 aa12.26□□□□□ -0.45
COL11A2-204ENST00000395194 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.25□□□□□ -0.45
COL11A2-204ENST00000395194 TRAV1-1A0A0B4J248 108 aa12.25□□□□□ -0.45
COL11A2-204ENST00000395194 F2Z2F3 143 aa12.25□□□□□ -0.45
COL11A2-204ENST00000395194 MEF2BQ02080 365 aaPredicted RBP12.25□□□□□ -0.45
COL11A2-204ENST00000395194 CIRBPQ14011 172 aaKnown RBP12.25□□□□□ -0.45
COL11A2-204ENST00000395194 COTL1Q14019 142 aa12.25□□□□□ -0.45
COL11A2-204ENST00000395194 WDR73Q6P4I2 378 aa12.25□□□□□ -0.45
COL11A2-204ENST00000395194 A0A087WYN8 130 aa12.24□□□□□ -0.45
COL11A2-204ENST00000395194 TRAV26-2A0A0B4J265 109 aa12.24□□□□□ -0.45
COL11A2-204ENST00000395194 TEX46H3BTG2 121 aa12.24□□□□□ -0.45
COL11A2-204ENST00000395194 SMIM12Q96EX1 92 aa12.24□□□□□ -0.45
COL11A2-204ENST00000395194 GAGE12HA6NDE8 117 aa12.23□□□□□ -0.45
COL11A2-204ENST00000395194 MT1HL1P0DM35 61 aa12.23□□□□□ -0.45
COL11A2-204ENST00000395194 TWIST1Q15672 202 aa12.23□□□□□ -0.45
COL11A2-204ENST00000395194 C15orf56Q8N910 161 aa12.23□□□□□ -0.45
COL11A2-204ENST00000395194 NUDT10Q8NFP7 164 aa12.23□□□□□ -0.45
COL11A2-204ENST00000395194 NUDT11Q96G61 164 aa12.23□□□□□ -0.45
COL11A2-204ENST00000395194 PDE6DO43924 150 aa12.22□□□□□ -0.45
COL11A2-204ENST00000395194 CTRLP40313 264 aa12.22□□□□□ -0.45
COL11A2-204ENST00000395194 HIGD2BQ4VC39 106 aa12.22□□□□□ -0.45
COL11A2-204ENST00000395194 SPACA4Q8TDM5 124 aa12.22□□□□□ -0.45
COL11A2-204ENST00000395194 BCL2P10415 239 aa12.21□□□□□ -0.45
COL11A2-204ENST00000395194 GATD1Q8NB37 220 aa12.21□□□□□ -0.45
COL11A2-204ENST00000395194 TNXBP22105 4242 aa12.2□□□□□ -0.46
COL11A2-204ENST00000395194 Q6ZNX1 250 aa12.2□□□□□ -0.46
COL11A2-204ENST00000395194 C9orf62Q8N4C0 152 aa12.2□□□□□ -0.46
COL11A2-204ENST00000395194 RPL39LQ96EH5 51 aaKnown RBP12.2□□□□□ -0.46
COL11A2-204ENST00000395194 RNASE7Q9H1E1 156 aaKnown RBP12.2□□□□□ -0.46
COL11A2-204ENST00000395194 BIN3Q9NQY0 253 aa12.2□□□□□ -0.46
COL11A2-204ENST00000395194 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.19□□□□□ -0.46
COL11A2-204ENST00000395194 IGKV2-29A2NJV5 120 aaPredicted RBP12.19□□□□□ -0.46
COL11A2-204ENST00000395194 PHOX2AO14813 284 aa12.19□□□□□ -0.46
COL11A2-204ENST00000395194 COX6A2Q02221 97 aa12.19□□□□□ -0.46
COL11A2-204ENST00000395194 EIF5AL1Q6IS14 154 aaKnown RBP12.19□□□□□ -0.46
COL11A2-204ENST00000395194 RNASEKQ6P5S7 137 aaKnown RBP12.19□□□□□ -0.46
COL11A2-204ENST00000395194 Q6ZRU5 148 aa12.19□□□□□ -0.46
COL11A2-204ENST00000395194 RNF185Q96GF1 192 aa12.19□□□□□ -0.46
COL11A2-204ENST00000395194 IGKV2-24A0A0C4DH68 120 aa12.18□□□□□ -0.46
COL11A2-204ENST00000395194 AMMECR1LQ6DCA0 310 aa12.18□□□□□ -0.46
COL11A2-204ENST00000395194 RPP21Q9H633 154 aaKnown RBP12.18□□□□□ -0.46
COL11A2-204ENST00000395194 K7EN84 100 aa12.17□□□□□ -0.46
COL11A2-204ENST00000395194 FOXA3P55318 350 aaPredicted RBP12.17□□□□□ -0.46
COL11A2-204ENST00000395194 PRSS3P2Q8NHM4 247 aa12.17□□□□□ -0.46
COL11A2-204ENST00000395194 CHCHD10Q8WYQ3 142 aaPredicted RBP12.17□□□□□ -0.46
COL11A2-204ENST00000395194 RPS10P46783 165 aaKnown RBP12.16□□□□□ -0.46
COL11A2-204ENST00000395194 MAJINQ3KP22 176 aa12.16□□□□□ -0.46
COL11A2-204ENST00000395194 CFAP161Q6P656 301 aa12.16□□□□□ -0.46
COL11A2-204ENST00000395194 OCC1Q8TAD7 63 aa12.16□□□□□ -0.46
COL11A2-204ENST00000395194 CNFNQ9BYD5 112 aa12.16□□□□□ -0.46
COL11A2-204ENST00000395194 PLAC8Q9NZF1 115 aa12.16□□□□□ -0.46
COL11A2-204ENST00000395194 APCSP02743 223 aa12.15□□□□□ -0.46
COL11A2-204ENST00000395194 C7orf33Q8WU49 177 aa12.15□□□□□ -0.46
COL11A2-204ENST00000395194 NDUFS6O75380 124 aaKnown RBP12.14□□□□□ -0.47
COL11A2-204ENST00000395194 GTSF1Q8WW33 167 aa12.14□□□□□ -0.47
COL11A2-204ENST00000395194 SDHAF1A6NFY7 115 aa12.13□□□□□ -0.47
COL11A2-204ENST00000395194 FGF6P10767 208 aa12.13□□□□□ -0.47
COL11A2-204ENST00000395194 SMIM15Q7Z3B0 74 aa12.13□□□□□ -0.47
COL11A2-204ENST00000395194 LYPD6BQ8NI32 183 aa12.13□□□□□ -0.47
COL11A2-204ENST00000395194 hCG_2014768A0A024R1R8 64 aa12.11□□□□□ -0.47
COL11A2-204ENST00000395194 NCR2O95944 276 aa12.11□□□□□ -0.47
COL11A2-204ENST00000395194 TCTE3Q8IZS6 198 aa12.11□□□□□ -0.47
COL11A2-204ENST00000395194 STPG4Q8N801 248 aa12.11□□□□□ -0.47
COL11A2-204ENST00000395194 LINC00526Q96FQ7 95 aa12.11□□□□□ -0.47
COL11A2-204ENST00000395194 LRP2P98164 4655 aa12.11□□□□□ -0.47
COL11A2-204ENST00000395194 A0A096LNI7 61 aa12.1□□□□□ -0.47
COL11A2-204ENST00000395194 GVQW2A0A096LPI5 108 aaPredicted RBP12.1□□□□□ -0.47
COL11A2-204ENST00000395194 XCL1P47992 114 aa12.1□□□□□ -0.47
COL11A2-204ENST00000395194 FOXI1Q12951 378 aa12.1□□□□□ -0.47
COL11A2-204ENST00000395194 SLC51BQ86UW2 128 aa12.1□□□□□ -0.47
COL11A2-204ENST00000395194 GATCO43716 136 aaKnown RBP12.09□□□□□ -0.47
COL11A2-204ENST00000395194 GAS8-AS1O95177 125 aa12.09□□□□□ -0.47
COL11A2-204ENST00000395194 PMCHP20382 165 aa12.09□□□□□ -0.47
COL11A2-204ENST00000395194 ODF1Q14990 250 aa12.09□□□□□ -0.47
COL11A2-204ENST00000395194 FAM231BA6NCW3 169 aa12.08□□□□□ -0.48
COL11A2-204ENST00000395194 TAGLN2P37802 199 aaKnown RBP12.08□□□□□ -0.48
COL11A2-204ENST00000395194 CEBPGP53567 150 aa12.08□□□□□ -0.48
COL11A2-204ENST00000395194 PRR3P79522 188 aaKnown RBP12.08□□□□□ -0.48
COL11A2-204ENST00000395194 AKAP14Q86UN6 197 aa12.08□□□□□ -0.48
COL11A2-204ENST00000395194 TMEM242Q9NWH2 141 aa12.08□□□□□ -0.48
COL11A2-204ENST00000395194 H7C423 109 aa12.07□□□□□ -0.48
COL11A2-204ENST00000395194 I3L3M4 83 aa12.07□□□□□ -0.48
COL11A2-204ENST00000395194 CCL25O15444 150 aa12.07□□□□□ -0.48
COL11A2-204ENST00000395194 TEX261Q6UWH6 196 aa12.07□□□□□ -0.48
COL11A2-204ENST00000395194 OR5A1Q8NGJ0 315 aa12.07□□□□□ -0.48
COL11A2-204ENST00000395194 BTF3L4Q96K17 158 aa12.07□□□□□ -0.48
COL11A2-204ENST00000395194 TMEM101Q96IK0 257 aa12.06□□□□□ -0.48
COL11A2-204ENST00000395194 LINC00959A0A1B0GUT2 108 aa12.05□□□□□ -0.48
COL11A2-204ENST00000395194 TSHBP01222 138 aa12.05□□□□□ -0.48
COL11A2-204ENST00000395194 ZNF25P17030 456 aaPredicted RBP12.05□□□□□ -0.48
COL11A2-204ENST00000395194 A8MWL6 223 aa12.04□□□□□ -0.48
COL11A2-204ENST00000395194 ST20Q9HBF5 79 aa12.04□□□□□ -0.48
COL11A2-204ENST00000395194 MRAP2Q96G30 205 aa12.03□□□□□ -0.48
COL11A2-204ENST00000395194 CARD19Q96LW7 228 aa12.03□□□□□ -0.48
COL11A2-204ENST00000395194 IGHV1-58A0A0C4DH39 117 aa12.02□□□□□ -0.49
COL11A2-204ENST00000395194 TRBV6-5A0A0K0K1A5 114 aa12.02□□□□□ -0.49
COL11A2-204ENST00000395194 TMEM250H0YL14 139 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms