RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 G0S2P27469 103 aa12.18□□□□□ -0.46
SLC6A4-202ENST00000394821 DEFB135Q30KP9 77 aa12.18□□□□□ -0.46
SLC6A4-202ENST00000394821 LINC00469Q8N7U9 141 aa12.17□□□□□ -0.46
SLC6A4-202ENST00000394821 RS1O15537 224 aa12.16□□□□□ -0.46
SLC6A4-202ENST00000394821 RHOHQ15669 191 aa12.16□□□□□ -0.46
SLC6A4-202ENST00000394821 TIMM17AQ99595 171 aa12.16□□□□□ -0.46
SLC6A4-202ENST00000394821 LINC01549A6NIU2 74 aa12.16□□□□□ -0.46
SLC6A4-202ENST00000394821 SAMD5Q5TGI4 173 aa12.16□□□□□ -0.46
SLC6A4-202ENST00000394821 TMEM263Q8WUH6 116 aaKnown RBP12.16□□□□□ -0.46
SLC6A4-202ENST00000394821 NBEAL1Q6ZS30 2694 aa12.15□□□□□ -0.46
SLC6A4-202ENST00000394821 Q6ZVH6 145 aa12.15□□□□□ -0.46
SLC6A4-202ENST00000394821 NOP10Q9NPE3 64 aaKnown RBP12.15□□□□□ -0.46
SLC6A4-202ENST00000394821 RHODO00212 210 aa12.15□□□□□ -0.47
SLC6A4-202ENST00000394821 IGHV3-53P01767 116 aa12.15□□□□□ -0.47
SLC6A4-202ENST00000394821 EMP1P54849 157 aa12.15□□□□□ -0.47
SLC6A4-202ENST00000394821 Q6ZTI0 123 aa12.15□□□□□ -0.47
SLC6A4-202ENST00000394821 C20orf203Q8NBC4 194 aa12.15□□□□□ -0.47
SLC6A4-202ENST00000394821 TMEM141Q96I45 108 aa12.15□□□□□ -0.47
SLC6A4-202ENST00000394821 X6R8D5 127 aa12.15□□□□□ -0.47
SLC6A4-202ENST00000394821 IGLV4-69A0A075B6H9 119 aa12.14□□□□□ -0.47
SLC6A4-202ENST00000394821 RRN3P1Q2M238 152 aa12.14□□□□□ -0.47
SLC6A4-202ENST00000394821 OPRPNQ99935 248 aaPredicted RBP12.14□□□□□ -0.47
SLC6A4-202ENST00000394821 TRGV1A0A0A0MS02 117 aa12.13□□□□□ -0.47
SLC6A4-202ENST00000394821 CST9LQ9H4G1 147 aa12.13□□□□□ -0.47
SLC6A4-202ENST00000394821 TNFRSF18Q9Y5U5 241 aa12.13□□□□□ -0.47
SLC6A4-202ENST00000394821 SIVA1O15304 175 aa12.13□□□□□ -0.47
SLC6A4-202ENST00000394821 PMVKQ15126 192 aa12.13□□□□□ -0.47
SLC6A4-202ENST00000394821 DEFB4AO15263 64 aa12.12□□□□□ -0.47
SLC6A4-202ENST00000394821 MAPKAPK5-AS1Q8N8E1 139 aa12.12□□□□□ -0.47
SLC6A4-202ENST00000394821 DNHD1Q96M86 4753 aa12.12□□□□□ -0.47
SLC6A4-202ENST00000394821 ZNF25P17030 456 aaPredicted RBP12.12□□□□□ -0.47
SLC6A4-202ENST00000394821 KIR2DL5BQ8NHK3 375 aa12.12□□□□□ -0.47
SLC6A4-202ENST00000394821 ZNF479Q96JC4 524 aa12.12□□□□□ -0.47
SLC6A4-202ENST00000394821 APOC4P55056 127 aa12.11□□□□□ -0.47
SLC6A4-202ENST00000394821 TMEM97Q5BJF2 176 aa12.11□□□□□ -0.47
SLC6A4-202ENST00000394821 C16orf74Q96GX8 76 aa12.11□□□□□ -0.47
SLC6A4-202ENST00000394821 TRAV8-6A0A0B4J262 113 aa12.11□□□□□ -0.47
SLC6A4-202ENST00000394821 C11orf86A6NJI1 115 aa12.11□□□□□ -0.47
SLC6A4-202ENST00000394821 MGAM2Q2M2H8 2515 aa12.1□□□□□ -0.47
SLC6A4-202ENST00000394821 OR4C5Q8NGB2 326 aa12.1□□□□□ -0.47
SLC6A4-202ENST00000394821 FAM104AQ969W3 186 aa12.1□□□□□ -0.47
SLC6A4-202ENST00000394821 TRBV25-1A0A075B6N4 114 aa12.09□□□□□ -0.47
SLC6A4-202ENST00000394821 DAZ2Q13117 558 aaKnown RBP12.09□□□□□ -0.47
SLC6A4-202ENST00000394821 OR11H2Q8NH07 326 aa12.09□□□□□ -0.47
SLC6A4-202ENST00000394821 RETNQ9HD89 108 aa12.09□□□□□ -0.47
SLC6A4-202ENST00000394821 GAGE12BA1L429 117 aa12.09□□□□□ -0.47
SLC6A4-202ENST00000394821 GAGE7O76087 117 aa12.09□□□□□ -0.47
SLC6A4-202ENST00000394821 GAGE12FP0CL80 117 aa12.09□□□□□ -0.47
SLC6A4-202ENST00000394821 GAGE12GP0CL81 117 aa12.09□□□□□ -0.47
SLC6A4-202ENST00000394821 GAGE12IP0CL82 117 aa12.09□□□□□ -0.47
SLC6A4-202ENST00000394821 IGHV3-38A0A0C4DH36 116 aa12.08□□□□□ -0.48
SLC6A4-202ENST00000394821 ZNRF2Q8NHG8 242 aa12.08□□□□□ -0.48
SLC6A4-202ENST00000394821 CHCHD7Q9BUK0 85 aa12.08□□□□□ -0.48
SLC6A4-202ENST00000394821 IGLV4-3A0A075B6K6 122 aa12.08□□□□□ -0.48
SLC6A4-202ENST00000394821 HSD52Q0P140 79 aa12.08□□□□□ -0.48
SLC6A4-202ENST00000394821 DNAJC30Q96LL9 226 aa12.08□□□□□ -0.48
SLC6A4-202ENST00000394821 TAX1BP3O14907 124 aa12.07□□□□□ -0.48
SLC6A4-202ENST00000394821 PHLDA1Q8WV24 401 aaPredicted RBP12.07□□□□□ -0.48
SLC6A4-202ENST00000394821 HIGD1BQ9P298 99 aa12.07□□□□□ -0.48
SLC6A4-202ENST00000394821 COX11Q9Y6N1 276 aa12.07□□□□□ -0.48
SLC6A4-202ENST00000394821 E9PLD3 99 aa12.06□□□□□ -0.48
SLC6A4-202ENST00000394821 CEMP1Q6PRD7 247 aaPredicted RBP12.06□□□□□ -0.48
SLC6A4-202ENST00000394821 OVOL2Q9BRP0 275 aa12.06□□□□□ -0.48
SLC6A4-202ENST00000394821 TRAV4A0A0B4J268 109 aa12.06□□□□□ -0.48
SLC6A4-202ENST00000394821 PRADC1Q9BSG0 188 aa12.06□□□□□ -0.48
SLC6A4-202ENST00000394821 CHAC1Q9BUX1 264 aa12.06□□□□□ -0.48
SLC6A4-202ENST00000394821 RNF183Q96D59 192 aa12.05□□□□□ -0.48
SLC6A4-202ENST00000394821 PYGO1Q9Y3Y4 419 aa12.05□□□□□ -0.48
SLC6A4-202ENST00000394821 IGHV4-28A0A0C4DH34 117 aa12.05□□□□□ -0.48
SLC6A4-202ENST00000394821 ORAOV1Q8WV07 137 aa12.05□□□□□ -0.48
SLC6A4-202ENST00000394821 A8MZ25 164 aa12.04□□□□□ -0.48
SLC6A4-202ENST00000394821 DEFB130BP0DP73 79 aa12.04□□□□□ -0.48
SLC6A4-202ENST00000394821 DEFB130AP0DP74 79 aa12.04□□□□□ -0.48
SLC6A4-202ENST00000394821 SEC11AP67812 179 aa12.04□□□□□ -0.48
SLC6A4-202ENST00000394821 PAPPA-AS1Q5QFB9 102 aa12.04□□□□□ -0.48
SLC6A4-202ENST00000394821 SLC25A29Q8N8R3 303 aa12.04□□□□□ -0.48
SLC6A4-202ENST00000394821 K7EIL1 84 aa12.03□□□□□ -0.48
SLC6A4-202ENST00000394821 Q8NAQ8 132 aa12.03□□□□□ -0.48
SLC6A4-202ENST00000394821 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.03□□□□□ -0.48
SLC6A4-202ENST00000394821 IGKV2-29A2NJV5 120 aaPredicted RBP12.03□□□□□ -0.48
SLC6A4-202ENST00000394821 K7EQD1 137 aa12.03□□□□□ -0.48
SLC6A4-202ENST00000394821 NFE4Q86UQ8 179 aa12.03□□□□□ -0.48
SLC6A4-202ENST00000394821 TENM3Q9P273 2699 aa12.03□□□□□ -0.48
SLC6A4-202ENST00000394821 TRBV7-3A0A075B6L6 115 aa12.02□□□□□ -0.48
SLC6A4-202ENST00000394821 TRGV2A0A075B6R0 118 aa12.02□□□□□ -0.48
SLC6A4-202ENST00000394821 MYMXA0A1B0GTQ4 84 aa12.02□□□□□ -0.48
SLC6A4-202ENST00000394821 K7EP13 123 aa12.02□□□□□ -0.48
SLC6A4-202ENST00000394821 NPSP0C0P6 89 aa12.02□□□□□ -0.48
SLC6A4-202ENST00000394821 GAGE1Q13065 139 aa12.02□□□□□ -0.48
SLC6A4-202ENST00000394821 COTL1Q14019 142 aa12.02□□□□□ -0.48
SLC6A4-202ENST00000394821 AMELXQ99217 191 aa12.02□□□□□ -0.48
SLC6A4-202ENST00000394821 VCX2Q9H322 139 aa12.02□□□□□ -0.48
SLC6A4-202ENST00000394821 UBE2D4Q9Y2X8 147 aa12.02□□□□□ -0.48
SLC6A4-202ENST00000394821 SMIM9A6NGZ8 99 aa12.02□□□□□ -0.49
SLC6A4-202ENST00000394821 TMEM170BQ5T4T1 132 aa12.02□□□□□ -0.49
SLC6A4-202ENST00000394821 FAM222AQ5U5X8 452 aa12.02□□□□□ -0.49
SLC6A4-202ENST00000394821 CELA1Q9UNI1 258 aa12.02□□□□□ -0.49
SLC6A4-202ENST00000394821 RNASE13Q5GAN3 156 aaKnown RBP12.01□□□□□ -0.49
SLC6A4-202ENST00000394821 TRBV10-1A0A0K0K1A3 114 aa12.01□□□□□ -0.49
SLC6A4-202ENST00000394821 A0A0J9YXV3 536 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms