RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 C10orf91Q5T1B1 145 aa5.71□□□□□ -1.5
SYNE2-205ENST00000394768 A0A0J9YX75 114 aa5.71□□□□□ -1.5
SYNE2-205ENST00000394768 COX17Q14061 63 aa5.7□□□□□ -1.5
SYNE2-205ENST00000394768 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.7□□□□□ -1.5
SYNE2-205ENST00000394768 Q8N9L7 120 aa5.7□□□□□ -1.5
SYNE2-205ENST00000394768 Q8N9W7 124 aa5.7□□□□□ -1.5
SYNE2-205ENST00000394768 Q6ZUT4 128 aa5.7□□□□□ -1.5
SYNE2-205ENST00000394768 HIVEP3Q5T1R4 2406 aa5.7□□□□□ -1.5
SYNE2-205ENST00000394768 MAP6D1Q9H9H5 199 aa5.7□□□□□ -1.5
SYNE2-205ENST00000394768 A0A0J9YXY3 114 aa5.7□□□□□ -1.5
SYNE2-205ENST00000394768 NUPR2A6NF83 97 aa5.7□□□□□ -1.5
SYNE2-205ENST00000394768 IGKV1-17P01599 117 aa5.7□□□□□ -1.5
SYNE2-205ENST00000394768 BLCAPP62952 87 aa5.7□□□□□ -1.5
SYNE2-205ENST00000394768 PIEZO1Q92508 2521 aa5.7□□□□□ -1.5
SYNE2-205ENST00000394768 B5MCH6 92 aa5.69□□□□□ -1.5
SYNE2-205ENST00000394768 NDUFC2-KCTD14E9PQ53 114 aa5.69□□□□□ -1.5
SYNE2-205ENST00000394768 LINC00269Q8N2A0 174 aa5.69□□□□□ -1.5
SYNE2-205ENST00000394768 LY6G6EA0A0G2JKS1 128 aa5.69□□□□□ -1.5
SYNE2-205ENST00000394768 CTSZQ9UBR2 303 aa5.69□□□□□ -1.5
SYNE2-205ENST00000394768 TNFRSF13BO14836 293 aaPredicted RBP5.69□□□□□ -1.5
SYNE2-205ENST00000394768 UBE2D2P62837 147 aa5.69□□□□□ -1.5
SYNE2-205ENST00000394768 SPRY4Q9C004 299 aa5.69□□□□□ -1.5
SYNE2-205ENST00000394768 U3KQA8 63 aa5.69□□□□□ -1.5
SYNE2-205ENST00000394768 IGLV3-1P01715 115 aa5.69□□□□□ -1.5
SYNE2-205ENST00000394768 C20orf203Q8NBC4 194 aa5.69□□□□□ -1.5
SYNE2-205ENST00000394768 FSTL3O95633 263 aa5.69□□□□□ -1.5
SYNE2-205ENST00000394768 ZNF726P1Q15940 193 aa5.68□□□□□ -1.5
SYNE2-205ENST00000394768 PCP2Q8IVA1 136 aa5.68□□□□□ -1.5
SYNE2-205ENST00000394768 PROK2Q9HC23 129 aa5.68□□□□□ -1.5
SYNE2-205ENST00000394768 IGKV1D-37A0A075B6S9 117 aa5.68□□□□□ -1.5
SYNE2-205ENST00000394768 Q8N976 141 aa5.68□□□□□ -1.5
SYNE2-205ENST00000394768 CHCHD10Q8WYQ3 142 aaPredicted RBP5.68□□□□□ -1.5
SYNE2-205ENST00000394768 C9orf85Q96MD7 179 aa5.68□□□□□ -1.5
SYNE2-205ENST00000394768 K7EN84 100 aa5.68□□□□□ -1.5
SYNE2-205ENST00000394768 ADCYAP1P18509 176 aa5.68□□□□□ -1.5
SYNE2-205ENST00000394768 UQCRQO14949 82 aa5.68□□□□□ -1.5
SYNE2-205ENST00000394768 PLA2G5P39877 138 aa5.68□□□□□ -1.5
SYNE2-205ENST00000394768 LOC107984640A0A0U1RRK4 108 aa5.67□□□□□ -1.5
SYNE2-205ENST00000394768 EXPH5Q8NEV8 1989 aa5.67□□□□□ -1.5
SYNE2-205ENST00000394768 G3V4G9 280 aa5.67□□□□□ -1.5
SYNE2-205ENST00000394768 PRB2P02812 416 aaPredicted RBP5.67□□□□□ -1.5
SYNE2-205ENST00000394768 ZNF581Q9P0T4 197 aa5.67□□□□□ -1.5
SYNE2-205ENST00000394768 COL4A1P02462 1669 aa5.67□□□□□ -1.5
SYNE2-205ENST00000394768 TRBV6-4A0A1B0GX49 114 aa5.67□□□□□ -1.5
SYNE2-205ENST00000394768 PRB1P04280 392 aa5.67□□□□□ -1.5
SYNE2-205ENST00000394768 SERP2Q8N6R1 65 aa5.67□□□□□ -1.5
SYNE2-205ENST00000394768 ESM1Q9NQ30 184 aa5.67□□□□□ -1.5
SYNE2-205ENST00000394768 FAM236DA0A1B0GTK5 79 aa5.67□□□□□ -1.5
SYNE2-205ENST00000394768 FAM236CP0DP71 79 aa5.67□□□□□ -1.5
SYNE2-205ENST00000394768 CDPF1Q6NVV7 123 aa5.67□□□□□ -1.5
SYNE2-205ENST00000394768 C1orf147Q96MC9 270 aaPredicted RBP5.67□□□□□ -1.5
SYNE2-205ENST00000394768 RAI1Q7Z5J4 1906 aaPredicted RBP5.66□□□□□ -1.5
SYNE2-205ENST00000394768 FAM19A3Q7Z5A8 133 aa5.66□□□□□ -1.5
SYNE2-205ENST00000394768 ALPK3Q96L96 1907 aa5.66□□□□□ -1.5
SYNE2-205ENST00000394768 TRAV23DV6A0A075B6W5 121 aa5.66□□□□□ -1.5
SYNE2-205ENST00000394768 SYCNQ0VAF6 134 aa5.66□□□□□ -1.5
SYNE2-205ENST00000394768 TEX49A0A1B0GTD5 131 aa5.66□□□□□ -1.5
SYNE2-205ENST00000394768 WFDC10BQ8IUB3 73 aa5.66□□□□□ -1.5
SYNE2-205ENST00000394768 RPL39P62891 51 aaKnown RBP5.66□□□□□ -1.5
SYNE2-205ENST00000394768 RPL28P46779 137 aaKnown RBP5.66□□□□□ -1.5
SYNE2-205ENST00000394768 ZFP36P26651 326 aaKnown RBP5.66□□□□□ -1.5
SYNE2-205ENST00000394768 C10orf25Q5T742 122 aa5.66□□□□□ -1.5
SYNE2-205ENST00000394768 FAM222AQ5U5X8 452 aa5.66□□□□□ -1.5
SYNE2-205ENST00000394768 NAV2Q8IVL1 2488 aa5.66□□□□□ -1.5
SYNE2-205ENST00000394768 ADORA2A-AS1P86434 159 aa5.65□□□□□ -1.5
SYNE2-205ENST00000394768 DAND5Q8N907 189 aa5.65□□□□□ -1.5
SYNE2-205ENST00000394768 C19orf71A6NCJ1 209 aa5.65□□□□□ -1.5
SYNE2-205ENST00000394768 A6NED7 52 aa5.65□□□□□ -1.5
SYNE2-205ENST00000394768 LYPD6BQ8NI32 183 aa5.65□□□□□ -1.51
SYNE2-205ENST00000394768 IGF1P05019 195 aa5.65□□□□□ -1.51
SYNE2-205ENST00000394768 CCKP06307 115 aa5.65□□□□□ -1.51
SYNE2-205ENST00000394768 ARTNQ5T4W7 220 aa5.65□□□□□ -1.51
SYNE2-205ENST00000394768 Q6YL49 198 aa5.65□□□□□ -1.51
SYNE2-205ENST00000394768 IGLV4-69A0A075B6H9 119 aa5.65□□□□□ -1.51
SYNE2-205ENST00000394768 A6NDX4 124 aa5.65□□□□□ -1.51
SYNE2-205ENST00000394768 ODF3BA8MYP8 253 aa5.65□□□□□ -1.51
SYNE2-205ENST00000394768 WT1P19544 449 aaPredicted RBP5.64□□□□□ -1.51
SYNE2-205ENST00000394768 PCNX3Q9H6A9 2034 aa5.64□□□□□ -1.51
SYNE2-205ENST00000394768 DEFB4AO15263 64 aa5.64□□□□□ -1.51
SYNE2-205ENST00000394768 COA6Q5JTJ3 125 aaKnown RBP5.64□□□□□ -1.51
SYNE2-205ENST00000394768 WIPF3A6NGB9 483 aa5.64□□□□□ -1.51
SYNE2-205ENST00000394768 IMUPQ9GZP8 106 aa5.64□□□□□ -1.51
SYNE2-205ENST00000394768 Q6ZVQ6 151 aa5.64□□□□□ -1.51
SYNE2-205ENST00000394768 ZNF503-AS2A6NEH8 195 aa5.64□□□□□ -1.51
SYNE2-205ENST00000394768 M0R378 163 aa5.64□□□□□ -1.51
SYNE2-205ENST00000394768 TIMM17BO60830 172 aa5.64□□□□□ -1.51
SYNE2-205ENST00000394768 FAM19A5Q7Z5A7 132 aaPredicted RBP5.64□□□□□ -1.51
SYNE2-205ENST00000394768 C11orf53Q8IXP5 236 aa5.64□□□□□ -1.51
SYNE2-205ENST00000394768 CLEC2BQ92478 149 aa5.64□□□□□ -1.51
SYNE2-205ENST00000394768 SIRPDQ9H106 197 aa5.64□□□□□ -1.51
SYNE2-205ENST00000394768 LYPD6Q86Y78 171 aa5.64□□□□□ -1.51
SYNE2-205ENST00000394768 LY6LH3BQJ8 138 aa5.64□□□□□ -1.51
SYNE2-205ENST00000394768 TRBV6-8A0A0A6YYG3 113 aa5.64□□□□□ -1.51
SYNE2-205ENST00000394768 F8WDY8 70 aa5.64□□□□□ -1.51
SYNE2-205ENST00000394768 KRTAP27-1Q3LI81 207 aa5.64□□□□□ -1.51
SYNE2-205ENST00000394768 IGLV1-47P01700 117 aa5.63□□□□□ -1.51
SYNE2-205ENST00000394768 ASPHD1Q5U4P2 390 aa5.63□□□□□ -1.51
SYNE2-205ENST00000394768 CD164L2Q6UWJ8 174 aa5.63□□□□□ -1.51
SYNE2-205ENST00000394768 A0A1B0GXF2 115 aa5.63□□□□□ -1.51
SYNE2-205ENST00000394768 GRNP28799 593 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms