RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 CENPWQ5EE01 88 aa11.16□□□□□ -0.62
SNRPA1-202ENST00000394082 OR2D3Q8NGH3 330 aa11.16□□□□□ -0.62
SNRPA1-202ENST00000394082 NIT2Q9NQR4 276 aa11.16□□□□□ -0.62
SNRPA1-202ENST00000394082 AP5S1Q9NUS5 200 aa11.16□□□□□ -0.62
SNRPA1-202ENST00000394082 IGLV10-54A0A075B6I4 117 aa11.15□□□□□ -0.62
SNRPA1-202ENST00000394082 IGHV3-64A0A075B6Q5 118 aa11.15□□□□□ -0.62
SNRPA1-202ENST00000394082 hDV102S1A0JD36 115 aa11.15□□□□□ -0.62
SNRPA1-202ENST00000394082 PDE6DO43924 150 aa11.15□□□□□ -0.62
SNRPA1-202ENST00000394082 MGPP08493 103 aa11.15□□□□□ -0.62
SNRPA1-202ENST00000394082 TRGC1P0CF51 173 aa11.15□□□□□ -0.62
SNRPA1-202ENST00000394082 BCL2P10415 239 aa11.15□□□□□ -0.62
SNRPA1-202ENST00000394082 WDR73Q6P4I2 378 aa11.15□□□□□ -0.62
SNRPA1-202ENST00000394082 IGLV4-60A0A075B6I1 120 aa11.14□□□□□ -0.63
SNRPA1-202ENST00000394082 MT1HL1P0DM35 61 aa11.14□□□□□ -0.63
SNRPA1-202ENST00000394082 TPPP3Q9BW30 176 aa11.14□□□□□ -0.63
SNRPA1-202ENST00000394082 DPH3P1Q9H4G8 78 aa11.14□□□□□ -0.63
SNRPA1-202ENST00000394082 BIN3Q9NQY0 253 aa11.14□□□□□ -0.63
SNRPA1-202ENST00000394082 GNG4P50150 75 aa11.13□□□□□ -0.63
SNRPA1-202ENST00000394082 SLPIP03973 132 aa11.12□□□□□ -0.63
SNRPA1-202ENST00000394082 SPACA4Q8TDM5 124 aa11.12□□□□□ -0.63
SNRPA1-202ENST00000394082 CNFNQ9BYD5 112 aa11.12□□□□□ -0.63
SNRPA1-202ENST00000394082 GFRA4Q9GZZ7 299 aa11.12□□□□□ -0.63
SNRPA1-202ENST00000394082 MED9Q9NWA0 146 aa11.12□□□□□ -0.63
SNRPA1-202ENST00000394082 A0A087WYN8 130 aa11.11□□□□□ -0.63
SNRPA1-202ENST00000394082 UBE2L6O14933 153 aa11.11□□□□□ -0.63
SNRPA1-202ENST00000394082 NTF3P20783 257 aa11.11□□□□□ -0.63
SNRPA1-202ENST00000394082 COTL1Q14019 142 aa11.11□□□□□ -0.63
SNRPA1-202ENST00000394082 CFAP161Q6P656 301 aa11.11□□□□□ -0.63
SNRPA1-202ENST00000394082 PLAC8Q9NZF1 115 aa11.11□□□□□ -0.63
SNRPA1-202ENST00000394082 CTRLP40313 264 aa11.1□□□□□ -0.63
SNRPA1-202ENST00000394082 LYZL1Q6UWQ5 148 aa11.1□□□□□ -0.63
SNRPA1-202ENST00000394082 RAB19A4D1S5 217 aa11.09□□□□□ -0.63
SNRPA1-202ENST00000394082 AMTP48728 403 aa11.09□□□□□ -0.63
SNRPA1-202ENST00000394082 TRBV20OR9-2A0A075B6H5 130 aa11.08□□□□□ -0.64
SNRPA1-202ENST00000394082 C15orf56Q8N910 161 aa11.08□□□□□ -0.64
SNRPA1-202ENST00000394082 DPH3Q96FX2 82 aa11.08□□□□□ -0.64
SNRPA1-202ENST00000394082 H7C423 109 aa11.07□□□□□ -0.64
SNRPA1-202ENST00000394082 NCR2O95944 276 aa11.07□□□□□ -0.64
SNRPA1-202ENST00000394082 CHTF8P0CG12 524 aa11.06□□□□□ -0.64
SNRPA1-202ENST00000394082 RPS10P46783 165 aaKnown RBP11.06□□□□□ -0.64
SNRPA1-202ENST00000394082 LYPD6BQ8NI32 183 aa11.06□□□□□ -0.64
SNRPA1-202ENST00000394082 NUDT10Q8NFP7 164 aa11.05□□□□□ -0.64
SNRPA1-202ENST00000394082 C7orf33Q8WU49 177 aa11.05□□□□□ -0.64
SNRPA1-202ENST00000394082 NUDT11Q96G61 164 aa11.05□□□□□ -0.64
SNRPA1-202ENST00000394082 GAGE12HA6NDE8 117 aa11.04□□□□□ -0.64
SNRPA1-202ENST00000394082 TMEM250H0YL14 139 aa11.04□□□□□ -0.64
SNRPA1-202ENST00000394082 NDUFS6O75380 124 aaKnown RBP11.04□□□□□ -0.64
SNRPA1-202ENST00000394082 TWIST1Q15672 202 aa11.04□□□□□ -0.64
SNRPA1-202ENST00000394082 TEX261Q6UWH6 196 aa11.04□□□□□ -0.64
SNRPA1-202ENST00000394082 GATD1Q8NB37 220 aa11.04□□□□□ -0.64
SNRPA1-202ENST00000394082 EIF5A2Q9GZV4 153 aaKnown RBP11.04□□□□□ -0.64
SNRPA1-202ENST00000394082 GVQW2A0A096LPI5 108 aaPredicted RBP11.03□□□□□ -0.64
SNRPA1-202ENST00000394082 COX6A2Q02221 97 aa11.03□□□□□ -0.64
SNRPA1-202ENST00000394082 FAM210AQ96ND0 272 aa11.03□□□□□ -0.64
SNRPA1-202ENST00000394082 RPP21Q9H633 154 aaKnown RBP11.03□□□□□ -0.64
SNRPA1-202ENST00000394082 TNXBP22105 4242 aa11.03□□□□□ -0.64
SNRPA1-202ENST00000394082 PHOX2AO14813 284 aa11.02□□□□□ -0.65
SNRPA1-202ENST00000394082 CEBPGP53567 150 aa11.02□□□□□ -0.65
SNRPA1-202ENST00000394082 CHCHD10Q8WYQ3 142 aaPredicted RBP11.02□□□□□ -0.65
SNRPA1-202ENST00000394082 ZNF25P17030 456 aaPredicted RBP11.01□□□□□ -0.65
SNRPA1-202ENST00000394082 AMMECR1LQ6DCA0 310 aa11.01□□□□□ -0.65
SNRPA1-202ENST00000394082 PKIGQ9Y2B9 76 aa11.01□□□□□ -0.65
SNRPA1-202ENST00000394082 SMIM15Q7Z3B0 74 aa11□□□□□ -0.65
SNRPA1-202ENST00000394082 PRSS3P2Q8NHM4 247 aa11□□□□□ -0.65
SNRPA1-202ENST00000394082 LINC00474Q9P2X8 69 aa11□□□□□ -0.65
SNRPA1-202ENST00000394082 TRAV26-2A0A0B4J265 109 aa10.99□□□□□ -0.65
SNRPA1-202ENST00000394082 APCSP02743 223 aa10.99□□□□□ -0.65
SNRPA1-202ENST00000394082 LINC01600Q96MT4 127 aa10.99□□□□□ -0.65
SNRPA1-202ENST00000394082 TRBV6-5A0A0K0K1A5 114 aa10.98□□□□□ -0.65
SNRPA1-202ENST00000394082 SDHAF1A6NFY7 115 aa10.98□□□□□ -0.65
SNRPA1-202ENST00000394082 K7EN84 100 aa10.98□□□□□ -0.65
SNRPA1-202ENST00000394082 FGF6P10767 208 aa10.98□□□□□ -0.65
SNRPA1-202ENST00000394082 FOXI1Q12951 378 aa10.98□□□□□ -0.65
SNRPA1-202ENST00000394082 MAJINQ3KP22 176 aa10.98□□□□□ -0.65
SNRPA1-202ENST00000394082 HIGD2BQ4VC39 106 aa10.98□□□□□ -0.65
SNRPA1-202ENST00000394082 OR5A1Q8NGJ0 315 aa10.98□□□□□ -0.65
SNRPA1-202ENST00000394082 OCC1Q8TAD7 63 aa10.98□□□□□ -0.65
SNRPA1-202ENST00000394082 GTSF1Q8WW33 167 aa10.98□□□□□ -0.65
SNRPA1-202ENST00000394082 RNASE7Q9H1E1 156 aaKnown RBP10.98□□□□□ -0.65
SNRPA1-202ENST00000394082 IGKV3OR2-268A0A0C4DH90 116 aa10.97□□□□□ -0.65
SNRPA1-202ENST00000394082 PRR3P79522 188 aaKnown RBP10.97□□□□□ -0.65
SNRPA1-202ENST00000394082 RNASEKQ6P5S7 137 aaKnown RBP10.97□□□□□ -0.65
SNRPA1-202ENST00000394082 STPG4Q8N801 248 aa10.97□□□□□ -0.65
SNRPA1-202ENST00000394082 RPL39LQ96EH5 51 aaKnown RBP10.97□□□□□ -0.65
SNRPA1-202ENST00000394082 SMIM7Q9BQ49 75 aa10.97□□□□□ -0.65
SNRPA1-202ENST00000394082 LRP2P98164 4655 aa10.96□□□□□ -0.65
SNRPA1-202ENST00000394082 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.96□□□□□ -0.65
SNRPA1-202ENST00000394082 IGKV2-29A2NJV5 120 aaPredicted RBP10.96□□□□□ -0.65
SNRPA1-202ENST00000394082 I3L3M4 83 aa10.96□□□□□ -0.65
SNRPA1-202ENST00000394082 FOXA3P55318 350 aaPredicted RBP10.96□□□□□ -0.65
SNRPA1-202ENST00000394082 IGKV2-24A0A0C4DH68 120 aa10.95□□□□□ -0.66
SNRPA1-202ENST00000394082 ZNF727A8MUV8 499 aa10.95□□□□□ -0.66
SNRPA1-202ENST00000394082 FAM231DQ6ZW35 169 aa10.95□□□□□ -0.66
SNRPA1-202ENST00000394082 BTF3L4Q96K17 158 aa10.95□□□□□ -0.66
SNRPA1-202ENST00000394082 IGHV1-58A0A0C4DH39 117 aa10.94□□□□□ -0.66
SNRPA1-202ENST00000394082 FAM231BA6NCW3 169 aa10.94□□□□□ -0.66
SNRPA1-202ENST00000394082 A8MWL6 223 aa10.94□□□□□ -0.66
SNRPA1-202ENST00000394082 SRP19P09132 144 aaKnown RBP10.94□□□□□ -0.66
SNRPA1-202ENST00000394082 ESDP10768 282 aa10.94□□□□□ -0.66
SNRPA1-202ENST00000394082 CT83Q5H943 113 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 782.7 ms