RNA–Protein interactions for RNA: ENST00000393346.7

PICALM-202, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PICALM, Length 2,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-202ENST00000393346 FAM231CP0DMU5 169 aa17.32■□□□□ 0.36
PICALM-202ENST00000393346 HOXD3P31249 432 aaPredicted RBP17.32■□□□□ 0.36
PICALM-202ENST00000393346 UBE2D3P61077 147 aa17.32■□□□□ 0.36
PICALM-202ENST00000393346 UBE2D2P62837 147 aa17.32■□□□□ 0.36
PICALM-202ENST00000393346 C11orf44Q8N8P7 122 aa17.32■□□□□ 0.36
PICALM-202ENST00000393346 SORL1Q92673 2214 aa17.32■□□□□ 0.36
PICALM-202ENST00000393346 CFAP126Q5VTH2 177 aa17.31■□□□□ 0.36
PICALM-202ENST00000393346 LOC107984156A0A0G2JMH3 177 aa17.3■□□□□ 0.36
PICALM-202ENST00000393346 ARL17AQ8IVW1 177 aa17.3■□□□□ 0.36
PICALM-202ENST00000393346 C20orf203Q8NBC4 194 aa17.3■□□□□ 0.36
PICALM-202ENST00000393346 LINC01006Q8NI28 216 aa17.3■□□□□ 0.36
PICALM-202ENST00000393346 OPRPNQ99935 248 aaPredicted RBP17.3■□□□□ 0.36
PICALM-202ENST00000393346 SPATA25Q9BR10 227 aa17.3■□□□□ 0.36
PICALM-202ENST00000393346 I3L3M4 83 aa17.3■□□□□ 0.36
PICALM-202ENST00000393346 LGALS3P17931 250 aaKnown RBP17.3■□□□□ 0.36
PICALM-202ENST00000393346 TRGV11A0A075B6L2 103 aa17.29■□□□□ 0.36
PICALM-202ENST00000393346 AZU1P20160 251 aa17.29■□□□□ 0.36
PICALM-202ENST00000393346 LYRM7Q5U5X0 104 aa17.29■□□□□ 0.36
PICALM-202ENST00000393346 C2CD3Q4AC94 2353 aa17.29■□□□□ 0.36
PICALM-202ENST00000393346 DUX3Q96PT4 197 aa17.29■□□□□ 0.36
PICALM-202ENST00000393346 GTSF1LQ9H1H1 148 aa17.29■□□□□ 0.36
PICALM-202ENST00000393346 TMEM223A0PJW6 202 aa17.28■□□□□ 0.36
PICALM-202ENST00000393346 CFC1BP0CG36 223 aa17.28■□□□□ 0.36
PICALM-202ENST00000393346 CFC1P0CG37 223 aa17.28■□□□□ 0.36
PICALM-202ENST00000393346 PSMB2P49721 201 aa17.28■□□□□ 0.36
PICALM-202ENST00000393346 LEPROTO15243 131 aa17.27■□□□□ 0.36
PICALM-202ENST00000393346 SCGB1A1P11684 91 aa17.27■□□□□ 0.35
PICALM-202ENST00000393346 SMCPP49901 116 aaPredicted RBP17.27■□□□□ 0.35
PICALM-202ENST00000393346 SLURP1P55000 103 aa17.27■□□□□ 0.35
PICALM-202ENST00000393346 SFTA2Q6UW10 78 aa17.27■□□□□ 0.35
PICALM-202ENST00000393346 ATP6V0E2Q8NHE4 81 aa17.27■□□□□ 0.35
PICALM-202ENST00000393346 C4orf3Q8WVX3 66 aa17.27■□□□□ 0.35
PICALM-202ENST00000393346 INSL3P51460 131 aa17.26■□□□□ 0.35
PICALM-202ENST00000393346 C10orf126Q8N4M7 172 aa17.25■□□□□ 0.35
PICALM-202ENST00000393346 C1QTNF4Q9BXJ3 329 aa17.25■□□□□ 0.35
PICALM-202ENST00000393346 C16orf95Q9H693 158 aa17.25■□□□□ 0.35
PICALM-202ENST00000393346 JMJD1CQ15652 2540 aa17.25■□□□□ 0.35
PICALM-202ENST00000393346 IGLV4-3A0A075B6K6 122 aa17.24■□□□□ 0.35
PICALM-202ENST00000393346 RHODO00212 210 aa17.24■□□□□ 0.35
PICALM-202ENST00000393346 CD28P10747 220 aa17.24■□□□□ 0.35
PICALM-202ENST00000393346 ZNF22P17026 224 aaPredicted RBP17.24■□□□□ 0.35
PICALM-202ENST00000393346 FOXI1Q12951 378 aa17.24■□□□□ 0.35
PICALM-202ENST00000393346 EDA2RQ9HAV5 297 aa17.24■□□□□ 0.35
PICALM-202ENST00000393346 A0A1W2PRX2 142 aa17.23■□□□□ 0.35
PICALM-202ENST00000393346 VCX2Q9H322 139 aa17.23■□□□□ 0.35
PICALM-202ENST00000393346 PRO1854Q9UHT4 67 aa17.23■□□□□ 0.35
PICALM-202ENST00000393346 TRBV20-1A0A075B6N2 111 aa17.22■□□□□ 0.35
PICALM-202ENST00000393346 SMAGPQ0VAQ4 97 aa17.22■□□□□ 0.35
PICALM-202ENST00000393346 RBMY1A1P0DJD3 496 aaKnown RBP17.21■□□□□ 0.35
PICALM-202ENST00000393346 RBMY1CP0DJD4 496 aa17.21■□□□□ 0.35
PICALM-202ENST00000393346 RBMY1FQ15415 496 aaKnown RBP17.21■□□□□ 0.35
PICALM-202ENST00000393346 A0A0J9YXV3 536 aa17.2■□□□□ 0.34
PICALM-202ENST00000393346 TCL1BO95988 128 aa17.2■□□□□ 0.34
PICALM-202ENST00000393346 CITED2Q99967 270 aaPredicted RBP17.2■□□□□ 0.34
PICALM-202ENST00000393346 PYGO1Q9Y3Y4 419 aa17.2■□□□□ 0.34
PICALM-202ENST00000393346 A4D1N5 150 aa17.18■□□□□ 0.34
PICALM-202ENST00000393346 KNCNA6PVL3 124 aa17.18■□□□□ 0.34
PICALM-202ENST00000393346 IGHV3-64A0A075B6Q5 118 aa17.16■□□□□ 0.34
PICALM-202ENST00000393346 A8MTW9 85 aa17.16■□□□□ 0.34
PICALM-202ENST00000393346 TEP1Q99973 2627 aaKnown RBP17.16■□□□□ 0.34
PICALM-202ENST00000393346 NDUFA7O95182 113 aa17.16■□□□□ 0.34
PICALM-202ENST00000393346 HTN1P15515 57 aa17.16■□□□□ 0.34
PICALM-202ENST00000393346 SBSPONQ8IVN8 264 aa17.16■□□□□ 0.34
PICALM-202ENST00000393346 RAX2Q96IS3 184 aa17.16■□□□□ 0.34
PICALM-202ENST00000393346 IGHV3-73A0A0B4J1V6 119 aa17.15■□□□□ 0.34
PICALM-202ENST00000393346 CRYBA4P53673 196 aa17.15■□□□□ 0.34
PICALM-202ENST00000393346 DEFB131AP59861 70 aa17.15■□□□□ 0.34
PICALM-202ENST00000393346 FAM104AQ969W3 186 aa17.15■□□□□ 0.34
PICALM-202ENST00000393346 PEMTQ9UBM1 199 aa17.15■□□□□ 0.34
PICALM-202ENST00000393346 TRAV2A0A0B4J234 112 aa17.14■□□□□ 0.33
PICALM-202ENST00000393346 CRLF1O75462 422 aa17.14■□□□□ 0.33
PICALM-202ENST00000393346 SCGB1C2P0DMR2 95 aa17.14■□□□□ 0.33
PICALM-202ENST00000393346 PROK1P58294 105 aa17.14■□□□□ 0.33
PICALM-202ENST00000393346 A8MWV9 139 aa17.14■□□□□ 0.33
PICALM-202ENST00000393346 H3BMM0 161 aa17.14■□□□□ 0.33
PICALM-202ENST00000393346 TEN1Q86WV5 123 aa17.14■□□□□ 0.33
PICALM-202ENST00000393346 MUSTN1Q8IVN3 82 aa17.14■□□□□ 0.33
PICALM-202ENST00000393346 TMEM263Q8WUH6 116 aaKnown RBP17.14■□□□□ 0.33
PICALM-202ENST00000393346 PTH2Q96A98 100 aa17.14■□□□□ 0.33
PICALM-202ENST00000393346 A0A0B4J2C4 111 aa17.13■□□□□ 0.33
PICALM-202ENST00000393346 M0R2P5 195 aa17.13■□□□□ 0.33
PICALM-202ENST00000393346 EIF4EBP3O60516 100 aaPredicted RBP17.13■□□□□ 0.33
PICALM-202ENST00000393346 MRPS36P82909 103 aaKnown RBP17.13■□□□□ 0.33
PICALM-202ENST00000393346 TNFRSF18Q9Y5U5 241 aa17.13■□□□□ 0.33
PICALM-202ENST00000393346 CCL24O00175 119 aa17.13■□□□□ 0.33
PICALM-202ENST00000393346 IGHV3-33P01772 117 aa17.13■□□□□ 0.33
PICALM-202ENST00000393346 PIK3CD-AS1Q5SR53 167 aa17.13■□□□□ 0.33
PICALM-202ENST00000393346 TENM1Q9UKZ4 2725 aa17.12■□□□□ 0.33
PICALM-202ENST00000393346 PPDPFLQ8WWR9 84 aa17.12■□□□□ 0.33
PICALM-202ENST00000393346 SPXQ9BT56 116 aa17.12■□□□□ 0.33
PICALM-202ENST00000393346 A0A0J9YXY3 114 aa17.12■□□□□ 0.33
PICALM-202ENST00000393346 IGHV3-30-3P0DP02 117 aa17.12■□□□□ 0.33
PICALM-202ENST00000393346 RBMY1BA6NDE4 496 aaKnown RBP17.11■□□□□ 0.33
PICALM-202ENST00000393346 RBMY1EA6NEQ0 496 aaKnown RBP17.11■□□□□ 0.33
PICALM-202ENST00000393346 RBMY1DP0C7P1 496 aaKnown RBP17.11■□□□□ 0.33
PICALM-202ENST00000393346 TIMM21Q9BVV7 248 aa17.11■□□□□ 0.33
PICALM-202ENST00000393346 CARD19Q96LW7 228 aa17.1■□□□□ 0.33
PICALM-202ENST00000393346 ERG28Q9UKR5 140 aa17.1■□□□□ 0.33
PICALM-202ENST00000393346 ATRQ13535 2644 aa17.1■□□□□ 0.33
PICALM-202ENST00000393346 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms