RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 GAGE5Q13069 117 aa5.03□□□□□ -1.6
CASP4-201ENST00000393150 PRR9Q5T870 116 aa5.03□□□□□ -1.6
CASP4-201ENST00000393150 CFAP126Q5VTH2 177 aa5.03□□□□□ -1.6
CASP4-201ENST00000393150 MIC13Q5XKP0 118 aa5.03□□□□□ -1.6
CASP4-201ENST00000393150 NIT1Q86X76 327 aa5.03□□□□□ -1.6
CASP4-201ENST00000393150 C9orf163Q8N9P6 203 aa5.03□□□□□ -1.6
CASP4-201ENST00000393150 Q8TAT8 98 aa5.03□□□□□ -1.6
CASP4-201ENST00000393150 CMTM2Q8TAZ6 248 aa5.03□□□□□ -1.6
CASP4-201ENST00000393150 MGST2Q99735 147 aa5.03□□□□□ -1.6
CASP4-201ENST00000393150 MAP1LC3BQ9GZQ8 125 aa5.03□□□□□ -1.6
CASP4-201ENST00000393150 VAX2Q9UIW0 290 aa5.03□□□□□ -1.6
CASP4-201ENST00000393150 TNXBP22105 4242 aa5.02□□□□□ -1.61
CASP4-201ENST00000393150 IGHV3-64A0A075B6Q5 118 aa5.02□□□□□ -1.61
CASP4-201ENST00000393150 A0A1B0GV50 99 aa5.02□□□□□ -1.61
CASP4-201ENST00000393150 C17orf112F2Z3M2 114 aa5.02□□□□□ -1.61
CASP4-201ENST00000393150 TMEM250H0YL14 139 aa5.02□□□□□ -1.61
CASP4-201ENST00000393150 CST7O76096 145 aa5.02□□□□□ -1.61
CASP4-201ENST00000393150 HLA-DQA1P01909 254 aa5.02□□□□□ -1.61
CASP4-201ENST00000393150 PRSS2P07478 247 aa5.02□□□□□ -1.61
CASP4-201ENST00000393150 RPL29P47914 159 aaKnown RBP5.02□□□□□ -1.61
CASP4-201ENST00000393150 ATP6V1FQ16864 119 aa5.02□□□□□ -1.61
CASP4-201ENST00000393150 GTSF1Q8WW33 167 aa5.02□□□□□ -1.61
CASP4-201ENST00000393150 YPEL4Q96NS1 127 aa5.02□□□□□ -1.61
CASP4-201ENST00000393150 NDFIP1Q9BT67 221 aa5.02□□□□□ -1.61
CASP4-201ENST00000393150 GNG13Q9P2W3 67 aa5.02□□□□□ -1.61
CASP4-201ENST00000393150 NAT8Q9UHE5 227 aa5.02□□□□□ -1.61
CASP4-201ENST00000393150 IGLV5-37A0A075B6J1 123 aa5.01□□□□□ -1.61
CASP4-201ENST00000393150 TRBV24-1A0A075B6N3 115 aa5.01□□□□□ -1.61
CASP4-201ENST00000393150 A0A0J9YXV3 536 aa5.01□□□□□ -1.61
CASP4-201ENST00000393150 CTXND1A0A1B0GTU2 59 aa5.01□□□□□ -1.61
CASP4-201ENST00000393150 A8MWV9 139 aa5.01□□□□□ -1.61
CASP4-201ENST00000393150 PYYP10082 97 aa5.01□□□□□ -1.61
CASP4-201ENST00000393150 MEF2BQ02080 365 aaPredicted RBP5.01□□□□□ -1.61
CASP4-201ENST00000393150 ZFP2Q6ZN57 461 aa5.01□□□□□ -1.61
CASP4-201ENST00000393150 MBD3L1Q8WWY6 194 aa5.01□□□□□ -1.61
CASP4-201ENST00000393150 SMIM7Q9BQ49 75 aa5.01□□□□□ -1.61
CASP4-201ENST00000393150 WDR61Q9GZS3 305 aaKnown RBP5.01□□□□□ -1.61
CASP4-201ENST00000393150 UBE2L5PA0A1B0GUS4 154 aa5□□□□□ -1.61
CASP4-201ENST00000393150 ZNF727A8MUV8 499 aa5□□□□□ -1.61
CASP4-201ENST00000393150 LINC00587B1AMM8 73 aa5□□□□□ -1.61
CASP4-201ENST00000393150 TYMSP04818 313 aa5□□□□□ -1.61
CASP4-201ENST00000393150 S100A4P26447 101 aaKnown RBP5□□□□□ -1.61
CASP4-201ENST00000393150 RANP62826 216 aaKnown RBP5□□□□□ -1.61
CASP4-201ENST00000393150 MIAQ16674 131 aa5□□□□□ -1.61
CASP4-201ENST00000393150 LBHQ53QV2 105 aaPredicted RBP5□□□□□ -1.61
CASP4-201ENST00000393150 FAM231BA6NCW3 169 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 F6UZH7 168 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 PDE6DO43924 150 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 OR7C2O60412 319 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 HIST1H2BKO60814 126 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 ANGP03950 147 aaKnown RBP4.99□□□□□ -1.61
CASP4-201ENST00000393150 HIST1H2BJP06899 126 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 FGF7P21781 194 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 HIST1H2BOP23527 126 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 HIST1H2BBP33778 126 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 NDUFA6P56556 154 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 HIST1H2BDP58876 126 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 HIST1H2BCP62807 126 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 ADIRFQ15847 76 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 HIST2H2BEQ16778 126 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.99□□□□□ -1.61
CASP4-201ENST00000393150 SPINK6Q6UWN8 80 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 SDIM1Q6ZPB5 146 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 LINC00469Q8N7U9 141 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 HIST1H2BHQ93079 126 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 PACRGQ96M98 296 aaPredicted RBP4.99□□□□□ -1.61
CASP4-201ENST00000393150 HIST1H2BNQ99877 126 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 HIST1H2BMQ99879 126 aa4.99□□□□□ -1.61
CASP4-201ENST00000393150 ACTR3CQ9C0K3 210 aaPredicted RBP4.99□□□□□ -1.61
CASP4-201ENST00000393150 A0A087WYN8 130 aa4.98□□□□□ -1.61
CASP4-201ENST00000393150 TRAV26-2A0A0B4J265 109 aa4.98□□□□□ -1.61
CASP4-201ENST00000393150 K7EQM0 130 aa4.98□□□□□ -1.61
CASP4-201ENST00000393150 PHOX2AO14813 284 aa4.98□□□□□ -1.61
CASP4-201ENST00000393150 RAB4BP61018 213 aa4.98□□□□□ -1.61
CASP4-201ENST00000393150 SSTP61278 116 aa4.98□□□□□ -1.61
CASP4-201ENST00000393150 RPL36AP83881 106 aaKnown RBP4.98□□□□□ -1.61
CASP4-201ENST00000393150 Q75L30 129 aa4.98□□□□□ -1.61
CASP4-201ENST00000393150 HIST3H2BBQ8N257 126 aa4.98□□□□□ -1.61
CASP4-201ENST00000393150 PTH2Q96A98 100 aa4.98□□□□□ -1.61
CASP4-201ENST00000393150 WDR83OSQ9Y284 106 aa4.98□□□□□ -1.61
CASP4-201ENST00000393150 KIF25-AS1Q9Y6Z4 181 aa4.98□□□□□ -1.61
CASP4-201ENST00000393150 TRAV9-1A0A075B6T8 112 aa4.97□□□□□ -1.61
CASP4-201ENST00000393150 TGIF2-C20orf24A0A0A6YYL0 155 aa4.97□□□□□ -1.61
CASP4-201ENST00000393150 HMGB3O15347 200 aaKnown RBP4.97□□□□□ -1.61
CASP4-201ENST00000393150 PRSS1P07477 247 aa4.97□□□□□ -1.61
CASP4-201ENST00000393150 CXCL1P09341 107 aa4.97□□□□□ -1.61
CASP4-201ENST00000393150 CDC34P49427 236 aaPredicted RBP4.97□□□□□ -1.61
CASP4-201ENST00000393150 TAS2R45P59539 299 aa4.97□□□□□ -1.61
CASP4-201ENST00000393150 CCL20P78556 96 aa4.97□□□□□ -1.61
CASP4-201ENST00000393150 TMEM241Q24JQ0 296 aa4.97□□□□□ -1.61
CASP4-201ENST00000393150 OR10D4PQ8NGN7 298 aa4.97□□□□□ -1.61
CASP4-201ENST00000393150 IMMP2LQ96T52 175 aa4.97□□□□□ -1.61
CASP4-201ENST00000393150 SLC25A2Q9BXI2 301 aa4.97□□□□□ -1.61
CASP4-201ENST00000393150 PKIGQ9Y2B9 76 aa4.97□□□□□ -1.61
CASP4-201ENST00000393150 ARL2-SNX15V9GYD0 113 aa4.97□□□□□ -1.61
CASP4-201ENST00000393150 GCGP01275 180 aa4.97□□□□□ -1.61
CASP4-201ENST00000393150 TRGC2P03986 189 aa4.97□□□□□ -1.61
CASP4-201ENST00000393150 TRGC1P0CF51 173 aa4.97□□□□□ -1.61
CASP4-201ENST00000393150 FABP4P15090 132 aa4.97□□□□□ -1.61
CASP4-201ENST00000393150 KRTAP10-8P60410 259 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms