RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 EIF4EBP3O60516 100 aaPredicted RBP13.54□□□□□ -0.24
TRAF3-203ENST00000392745 ZNF688P0C7X2 276 aa13.54□□□□□ -0.24
TRAF3-203ENST00000392745 RPL32P62910 135 aaKnown RBP13.54□□□□□ -0.24
TRAF3-203ENST00000392745 ZNF876PQ49A33 203 aa13.54□□□□□ -0.24
TRAF3-203ENST00000392745 TMEM141Q96I45 108 aa13.54□□□□□ -0.24
TRAF3-203ENST00000392745 OPRPNQ99935 248 aaPredicted RBP13.54□□□□□ -0.24
TRAF3-203ENST00000392745 VCYO14598 125 aa13.53□□□□□ -0.24
TRAF3-203ENST00000392745 C4orf3Q8WVX3 66 aa13.53□□□□□ -0.24
TRAF3-203ENST00000392745 TIMM17AQ99595 171 aa13.53□□□□□ -0.24
TRAF3-203ENST00000392745 ID1P41134 155 aa13.53□□□□□ -0.24
TRAF3-203ENST00000392745 OTOGQ6ZRI0 2925 aa13.52□□□□□ -0.24
TRAF3-203ENST00000392745 A4D1N5 150 aa13.52□□□□□ -0.25
TRAF3-203ENST00000392745 TRPT1Q86TN4 253 aaKnown RBP13.52□□□□□ -0.25
TRAF3-203ENST00000392745 LGALS3P17931 250 aaKnown RBP13.51□□□□□ -0.25
TRAF3-203ENST00000392745 FAM74A4Q5TZK3 123 aa13.51□□□□□ -0.25
TRAF3-203ENST00000392745 C11orf44Q8N8P7 122 aa13.51□□□□□ -0.25
TRAF3-203ENST00000392745 RNF183Q96D59 192 aa13.51□□□□□ -0.25
TRAF3-203ENST00000392745 ZNF256Q9Y2P7 627 aaPredicted RBP13.51□□□□□ -0.25
TRAF3-203ENST00000392745 SETD2Q9BYW2 2564 aaPredicted RBP13.51□□□□□ -0.25
TRAF3-203ENST00000392745 K7EQG2 157 aa13.51□□□□□ -0.25
TRAF3-203ENST00000392745 FAM159AQ6UWV7 190 aa13.51□□□□□ -0.25
TRAF3-203ENST00000392745 H7C2G1 150 aa13.5□□□□□ -0.25
TRAF3-203ENST00000392745 HIVEP2P31629 2446 aa13.5□□□□□ -0.25
TRAF3-203ENST00000392745 IGHV3-64A0A075B6Q5 118 aa13.5□□□□□ -0.25
TRAF3-203ENST00000392745 SLC25A20O43772 301 aa13.5□□□□□ -0.25
TRAF3-203ENST00000392745 RNASE1P07998 156 aaKnown RBP13.5□□□□□ -0.25
TRAF3-203ENST00000392745 KLLNB2CW77 178 aa13.49□□□□□ -0.25
TRAF3-203ENST00000392745 C9JAW5 83 aa13.49□□□□□ -0.25
TRAF3-203ENST00000392745 TRAV12-3A0A0B4J271 114 aa13.49□□□□□ -0.25
TRAF3-203ENST00000392745 TRBV27A0A0K0K1C4 114 aa13.49□□□□□ -0.25
TRAF3-203ENST00000392745 IGHV3-33P01772 117 aa13.49□□□□□ -0.25
TRAF3-203ENST00000392745 VCX2Q9H322 139 aa13.49□□□□□ -0.25
TRAF3-203ENST00000392745 TRAV2A0A0B4J234 112 aa13.48□□□□□ -0.25
TRAF3-203ENST00000392745 LINC01006Q8NI28 216 aa13.48□□□□□ -0.25
TRAF3-203ENST00000392745 ERG28Q9UKR5 140 aa13.48□□□□□ -0.25
TRAF3-203ENST00000392745 WNK1Q9H4A3 2382 aa13.48□□□□□ -0.25
TRAF3-203ENST00000392745 CD28P10747 220 aa13.48□□□□□ -0.25
TRAF3-203ENST00000392745 TMEM263Q8WUH6 116 aaKnown RBP13.48□□□□□ -0.25
TRAF3-203ENST00000392745 TRBV7-9A0A0J9YWB2 115 aa13.47□□□□□ -0.25
TRAF3-203ENST00000392745 LY6G6DO95868 133 aa13.47□□□□□ -0.25
TRAF3-203ENST00000392745 SNRPD3P62318 126 aaKnown RBP13.47□□□□□ -0.25
TRAF3-203ENST00000392745 MUSTN1Q8IVN3 82 aa13.47□□□□□ -0.25
TRAF3-203ENST00000392745 TMEM223A0PJW6 202 aa13.46□□□□□ -0.25
TRAF3-203ENST00000392745 A0A1W2PRX2 142 aa13.46□□□□□ -0.26
TRAF3-203ENST00000392745 HILS1P60008 231 aa13.46□□□□□ -0.26
TRAF3-203ENST00000392745 TRBV6-5A0A0K0K1A5 114 aa13.45□□□□□ -0.26
TRAF3-203ENST00000392745 LEPROTO15243 131 aa13.45□□□□□ -0.26
TRAF3-203ENST00000392745 C16orf95Q9H693 158 aa13.45□□□□□ -0.26
TRAF3-203ENST00000392745 A0A0J9YX75 114 aa13.45□□□□□ -0.26
TRAF3-203ENST00000392745 P0DMU3 169 aa13.45□□□□□ -0.26
TRAF3-203ENST00000392745 FAM231AP0DMU4 169 aa13.45□□□□□ -0.26
TRAF3-203ENST00000392745 FAM231CP0DMU5 169 aa13.45□□□□□ -0.26
TRAF3-203ENST00000392745 ZNF56Q15929 161 aa13.45□□□□□ -0.26
TRAF3-203ENST00000392745 MDFICQ9P1T7 246 aa13.45□□□□□ -0.26
TRAF3-203ENST00000392745 PEMTQ9UBM1 199 aa13.45□□□□□ -0.26
TRAF3-203ENST00000392745 TMEM262E9PQX1 116 aa13.44□□□□□ -0.26
TRAF3-203ENST00000392745 ZFAND6Q6FIF0 208 aa13.44□□□□□ -0.26
TRAF3-203ENST00000392745 ANAPC13Q9BS18 74 aa13.44□□□□□ -0.26
TRAF3-203ENST00000392745 M0QY20 66 aa13.44□□□□□ -0.26
TRAF3-203ENST00000392745 IGKV3-20P01619 116 aa13.44□□□□□ -0.26
TRAF3-203ENST00000392745 ZNF22P17026 224 aaPredicted RBP13.44□□□□□ -0.26
TRAF3-203ENST00000392745 CITED2Q99967 270 aaPredicted RBP13.44□□□□□ -0.26
TRAF3-203ENST00000392745 TRAV12-2A0A075B6T6 113 aa13.42□□□□□ -0.26
TRAF3-203ENST00000392745 TMEM61Q8N0U2 210 aa13.42□□□□□ -0.26
TRAF3-203ENST00000392745 CITED1Q99966 193 aa13.42□□□□□ -0.26
TRAF3-203ENST00000392745 A0A0B4J2C4 111 aa13.42□□□□□ -0.26
TRAF3-203ENST00000392745 A0A0J9YXV3 536 aa13.42□□□□□ -0.26
TRAF3-203ENST00000392745 RHODO00212 210 aa13.42□□□□□ -0.26
TRAF3-203ENST00000392745 SVIPQ8NHG7 77 aa13.42□□□□□ -0.26
TRAF3-203ENST00000392745 NTN5Q8WTR8 489 aaPredicted RBP13.42□□□□□ -0.26
TRAF3-203ENST00000392745 IGHV3-16A0A0C4DH30 117 aa13.41□□□□□ -0.26
TRAF3-203ENST00000392745 Q1RN00 199 aa13.41□□□□□ -0.26
TRAF3-203ENST00000392745 NSUN5P1Q3KNT7 163 aa13.41□□□□□ -0.26
TRAF3-203ENST00000392745 SETXQ7Z333 2677 aaKnown RBP13.41□□□□□ -0.26
TRAF3-203ENST00000392745 C9orf85Q96MD7 179 aa13.41□□□□□ -0.26
TRAF3-203ENST00000392745 ADARB2-AS1A8MUL3 147 aa13.4□□□□□ -0.26
TRAF3-203ENST00000392745 Q8N1Y9 231 aa13.4□□□□□ -0.26
TRAF3-203ENST00000392745 M0QXV9 152 aa13.39□□□□□ -0.27
TRAF3-203ENST00000392745 CCL24O00175 119 aa13.39□□□□□ -0.27
TRAF3-203ENST00000392745 RHOHQ15669 191 aa13.39□□□□□ -0.27
TRAF3-203ENST00000392745 DEFB114Q30KQ6 69 aa13.39□□□□□ -0.27
TRAF3-203ENST00000392745 C20orf203Q8NBC4 194 aa13.39□□□□□ -0.27
TRAF3-203ENST00000392745 CRLF1O75462 422 aa13.39□□□□□ -0.27
TRAF3-203ENST00000392745 LINC01620Q4KN68 170 aa13.39□□□□□ -0.27
TRAF3-203ENST00000392745 IGLV4-3A0A075B6K6 122 aa13.38□□□□□ -0.27
TRAF3-203ENST00000392745 A0A0J9YXY3 114 aa13.38□□□□□ -0.27
TRAF3-203ENST00000392745 M0R2P5 195 aa13.38□□□□□ -0.27
TRAF3-203ENST00000392745 ODF3Q96PU9 254 aa13.38□□□□□ -0.27
TRAF3-203ENST00000392745 TRAV4A0A0B4J268 109 aa13.38□□□□□ -0.27
TRAF3-203ENST00000392745 NHLRC4P0CG21 123 aaPredicted RBP13.38□□□□□ -0.27
TRAF3-203ENST00000392745 DEFB131AP59861 70 aa13.38□□□□□ -0.27
TRAF3-203ENST00000392745 TEX49A0A1B0GTD5 131 aa13.37□□□□□ -0.27
TRAF3-203ENST00000392745 DYNLRB2Q8TF09 96 aa13.37□□□□□ -0.27
TRAF3-203ENST00000392745 SPXQ9BT56 116 aa13.37□□□□□ -0.27
TRAF3-203ENST00000392745 KNCNA6PVL3 124 aa13.37□□□□□ -0.27
TRAF3-203ENST00000392745 ATXN8Q156A1 80 aa13.37□□□□□ -0.27
TRAF3-203ENST00000392745 SPINK13Q1W4C9 94 aa13.37□□□□□ -0.27
TRAF3-203ENST00000392745 SS18L2Q9UHA2 77 aa13.37□□□□□ -0.27
TRAF3-203ENST00000392745 NIPBLQ6KC79 2804 aaeCLIP13.37□□□□□ -0.27
TRAF3-203ENST00000392745 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms