RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 JMJD1CQ15652 2540 aa14.2□□□□□ -0.14
CCDC50-202ENST00000392456 TINCRA0A1B0GVN0 87 aa14.2□□□□□ -0.14
CCDC50-202ENST00000392456 ATP5G1P05496 136 aa14.2□□□□□ -0.14
CCDC50-202ENST00000392456 HLA-DMBP28068 263 aa14.19□□□□□ -0.14
CCDC50-202ENST00000392456 LYZL1Q6UWQ5 148 aa14.19□□□□□ -0.14
CCDC50-202ENST00000392456 PLEKHB2Q96CS7 222 aa14.19□□□□□ -0.14
CCDC50-202ENST00000392456 TMEM89A2RUT3 159 aa14.19□□□□□ -0.14
CCDC50-202ENST00000392456 M0R3E3 92 aa14.19□□□□□ -0.14
CCDC50-202ENST00000392456 ELANEP08246 267 aa14.19□□□□□ -0.14
CCDC50-202ENST00000392456 C2CD3Q4AC94 2353 aa14.19□□□□□ -0.14
CCDC50-202ENST00000392456 LINC01620Q4KN68 170 aa14.19□□□□□ -0.14
CCDC50-202ENST00000392456 C2orf48Q96LS8 159 aa14.19□□□□□ -0.14
CCDC50-202ENST00000392456 METTL26Q96S19 204 aa14.19□□□□□ -0.14
CCDC50-202ENST00000392456 NXT2Q9NPJ8 142 aaKnown RBP14.19□□□□□ -0.14
CCDC50-202ENST00000392456 U3KQE9 123 aa14.19□□□□□ -0.14
CCDC50-202ENST00000392456 TEP1Q99973 2627 aaKnown RBP14.18□□□□□ -0.14
CCDC50-202ENST00000392456 TRBV6-1A0A0K0K1D8 114 aa14.18□□□□□ -0.14
CCDC50-202ENST00000392456 NDUFA4O00483 81 aa14.18□□□□□ -0.14
CCDC50-202ENST00000392456 RNF152Q8N8N0 203 aa14.17□□□□□ -0.14
CCDC50-202ENST00000392456 JPT2Q9H910 190 aa14.17□□□□□ -0.14
CCDC50-202ENST00000392456 PRO1854Q9UHT4 67 aa14.17□□□□□ -0.14
CCDC50-202ENST00000392456 WNK1Q9H4A3 2382 aa14.17□□□□□ -0.14
CCDC50-202ENST00000392456 TRBV10-2A0A0K0K1G8 114 aa14.16□□□□□ -0.14
CCDC50-202ENST00000392456 RNASE1P07998 156 aaKnown RBP14.16□□□□□ -0.14
CCDC50-202ENST00000392456 HILS1P60008 231 aa14.16□□□□□ -0.14
CCDC50-202ENST00000392456 DEFB136Q30KP8 78 aa14.16□□□□□ -0.14
CCDC50-202ENST00000392456 Q8N8P6 123 aa14.16□□□□□ -0.14
CCDC50-202ENST00000392456 C11orf44Q8N8P7 122 aa14.16□□□□□ -0.14
CCDC50-202ENST00000392456 TMEM190Q8WZ59 177 aa14.16□□□□□ -0.14
CCDC50-202ENST00000392456 ZNF815PA8K554 130 aa14.16□□□□□ -0.14
CCDC50-202ENST00000392456 P0DMU3 169 aa14.16□□□□□ -0.14
CCDC50-202ENST00000392456 FAM231AP0DMU4 169 aa14.16□□□□□ -0.14
CCDC50-202ENST00000392456 FAM231CP0DMU5 169 aa14.16□□□□□ -0.14
CCDC50-202ENST00000392456 TMEM258P61165 79 aa14.15□□□□□ -0.14
CCDC50-202ENST00000392456 SCGB1D4Q6XE38 83 aa14.15□□□□□ -0.14
CCDC50-202ENST00000392456 UBE2E2Q96LR5 201 aa14.15□□□□□ -0.14
CCDC50-202ENST00000392456 IGHV4OR15-8A0A075B7B6 117 aa14.15□□□□□ -0.14
CCDC50-202ENST00000392456 A0A087WW49 117 aa14.15□□□□□ -0.14
CCDC50-202ENST00000392456 RS1O15537 224 aa14.15□□□□□ -0.14
CCDC50-202ENST00000392456 CRIP1P50238 77 aa14.15□□□□□ -0.14
CCDC50-202ENST00000392456 CYSRT1A8MQ03 144 aa14.14□□□□□ -0.15
CCDC50-202ENST00000392456 TRACP01848 142 aa14.14□□□□□ -0.15
CCDC50-202ENST00000392456 F8VRH5 84 aa14.14□□□□□ -0.15
CCDC50-202ENST00000392456 ATXN8Q156A1 80 aa14.14□□□□□ -0.15
CCDC50-202ENST00000392456 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.14□□□□□ -0.15
CCDC50-202ENST00000392456 TMEM75Q8N9X5 138 aa14.14□□□□□ -0.15
CCDC50-202ENST00000392456 LINC01006Q8NI28 216 aa14.14□□□□□ -0.15
CCDC50-202ENST00000392456 C1orf43Q9BWL3 253 aa14.14□□□□□ -0.15
CCDC50-202ENST00000392456 hADV29S1A0JD25 119 aa14.13□□□□□ -0.15
CCDC50-202ENST00000392456 DEFB121Q5J5C9 76 aa14.13□□□□□ -0.15
CCDC50-202ENST00000392456 CYSTM1Q9H1C7 97 aa14.13□□□□□ -0.15
CCDC50-202ENST00000392456 H7C1H1 209 aa14.13□□□□□ -0.15
CCDC50-202ENST00000392456 PYGO1Q9Y3Y4 419 aa14.13□□□□□ -0.15
CCDC50-202ENST00000392456 GAS8-AS1O95177 125 aa14.12□□□□□ -0.15
CCDC50-202ENST00000392456 PDE6HQ13956 83 aa14.12□□□□□ -0.15
CCDC50-202ENST00000392456 RNF182Q8N6D2 247 aa14.12□□□□□ -0.15
CCDC50-202ENST00000392456 RNF185Q96GF1 192 aa14.12□□□□□ -0.15
CCDC50-202ENST00000392456 FAM19A4Q96LR4 140 aa14.12□□□□□ -0.15
CCDC50-202ENST00000392456 KHDC1LQ5JSQ8 128 aa14.12□□□□□ -0.15
CCDC50-202ENST00000392456 TMEM170BQ5T4T1 132 aa14.12□□□□□ -0.15
CCDC50-202ENST00000392456 GPHB5Q86YW7 130 aa14.12□□□□□ -0.15
CCDC50-202ENST00000392456 TRAV12-1A0A0B4J245 112 aa14.11□□□□□ -0.15
CCDC50-202ENST00000392456 RPL35AP18077 110 aaKnown RBP14.11□□□□□ -0.15
CCDC50-202ENST00000392456 SYNJ2BPP57105 145 aa14.11□□□□□ -0.15
CCDC50-202ENST00000392456 LYPD1Q8N2G4 141 aa14.11□□□□□ -0.15
CCDC50-202ENST00000392456 IGLV2-18A0A075B6J9 118 aa14.1□□□□□ -0.15
CCDC50-202ENST00000392456 ZNF22P17026 224 aaPredicted RBP14.1□□□□□ -0.15
CCDC50-202ENST00000392456 RHPN1-AS1Q9BWJ2 59 aa14.1□□□□□ -0.15
CCDC50-202ENST00000392456 DAZ1Q9NQZ3 744 aaKnown RBP14.1□□□□□ -0.15
CCDC50-202ENST00000392456 ZNF256Q9Y2P7 627 aaPredicted RBP14.1□□□□□ -0.15
CCDC50-202ENST00000392456 IGHV3-30P01768 117 aa14.1□□□□□ -0.15
CCDC50-202ENST00000392456 IGHV3-30-5P0DP03 117 aa14.1□□□□□ -0.15
CCDC50-202ENST00000392456 HOXD3P31249 432 aaPredicted RBP14.1□□□□□ -0.15
CCDC50-202ENST00000392456 DSCR8Q96T75 97 aa14.1□□□□□ -0.15
CCDC50-202ENST00000392456 IGKV3-7A0A075B6H7 116 aa14.09□□□□□ -0.15
CCDC50-202ENST00000392456 IGHV7-4-1A0A0J9YVY3 117 aa14.09□□□□□ -0.15
CCDC50-202ENST00000392456 IGHV3-33P01772 117 aa14.09□□□□□ -0.15
CCDC50-202ENST00000392456 SORL1Q92673 2214 aa14.09□□□□□ -0.15
CCDC50-202ENST00000392456 A0A0J9YY99 117 aa14.09□□□□□ -0.15
CCDC50-202ENST00000392456 CD28P10747 220 aa14.09□□□□□ -0.15
CCDC50-202ENST00000392456 IGKV2-40A0A087WW87 121 aaPredicted RBP14.08□□□□□ -0.15
CCDC50-202ENST00000392456 PRAC2D3DTV9 90 aa14.08□□□□□ -0.15
CCDC50-202ENST00000392456 IGKV2D-40P01614 121 aaPredicted RBP14.08□□□□□ -0.15
CCDC50-202ENST00000392456 SLURP1P55000 103 aa14.08□□□□□ -0.15
CCDC50-202ENST00000392456 TENM1Q9UKZ4 2725 aa14.08□□□□□ -0.16
CCDC50-202ENST00000392456 C2orf82Q6UX34 121 aa14.07□□□□□ -0.16
CCDC50-202ENST00000392456 A0A1W2PRX2 142 aa14.06□□□□□ -0.16
CCDC50-202ENST00000392456 LINC00336Q6ZUF6 198 aa14.06□□□□□ -0.16
CCDC50-202ENST00000392456 KLHL30-AS1Q8NEE0 82 aa14.06□□□□□ -0.16
CCDC50-202ENST00000392456 C16orf95Q9H693 158 aa14.06□□□□□ -0.16
CCDC50-202ENST00000392456 RPL11P62913 178 aaKnown RBP14.06□□□□□ -0.16
CCDC50-202ENST00000392456 C8orf49Q96NF6 230 aa14.06□□□□□ -0.16
CCDC50-202ENST00000392456 K7EMT4 169 aa14.05□□□□□ -0.16
CCDC50-202ENST00000392456 EIF4EBP3O60516 100 aaPredicted RBP14.05□□□□□ -0.16
CCDC50-202ENST00000392456 HERVK_113P61574 105 aa14.05□□□□□ -0.16
CCDC50-202ENST00000392456 C4orf3Q8WVX3 66 aa14.05□□□□□ -0.16
CCDC50-202ENST00000392456 C20orf173Q96LM9 149 aa14.05□□□□□ -0.16
CCDC50-202ENST00000392456 PRR25Q96S07 402 aa14.05□□□□□ -0.16
CCDC50-202ENST00000392456 PKIGQ9Y2B9 76 aa14.05□□□□□ -0.16
CCDC50-202ENST00000392456 H3BT86 120 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 259.8 ms