RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 HECTD1Q9ULT8 2610 aa7.18□□□□□ -1.26
COL6A3-204ENST00000392003 HIVEP2P31629 2446 aa7.18□□□□□ -1.26
COL6A3-204ENST00000392003 TRAV12-2A0A075B6T6 113 aa7.17□□□□□ -1.26
COL6A3-204ENST00000392003 IGHV1OR15-1A0A075B7D0 117 aa7.17□□□□□ -1.26
COL6A3-204ENST00000392003 Q5XG85 94 aa7.17□□□□□ -1.26
COL6A3-204ENST00000392003 C11orf44Q8N8P7 122 aa7.17□□□□□ -1.26
COL6A3-204ENST00000392003 TRBV25-1A0A075B6N4 114 aa7.17□□□□□ -1.26
COL6A3-204ENST00000392003 ZNF56Q15929 161 aa7.17□□□□□ -1.26
COL6A3-204ENST00000392003 C9orf153Q5TBE3 101 aa7.17□□□□□ -1.26
COL6A3-204ENST00000392003 PPDPFLQ8WWR9 84 aa7.17□□□□□ -1.26
COL6A3-204ENST00000392003 ITPR3Q14573 2671 aa7.17□□□□□ -1.26
COL6A3-204ENST00000392003 NDUFA7O95182 113 aa7.17□□□□□ -1.26
COL6A3-204ENST00000392003 SUMO4Q6EEV6 95 aa7.17□□□□□ -1.26
COL6A3-204ENST00000392003 TRGV11A0A075B6L2 103 aa7.16□□□□□ -1.26
COL6A3-204ENST00000392003 JPT2Q9H910 190 aa7.16□□□□□ -1.26
COL6A3-204ENST00000392003 FBN2P35556 2912 aa7.16□□□□□ -1.26
COL6A3-204ENST00000392003 IGHV3-16A0A0C4DH30 117 aa7.16□□□□□ -1.26
COL6A3-204ENST00000392003 DEFB136Q30KP8 78 aa7.16□□□□□ -1.26
COL6A3-204ENST00000392003 C10orf126Q8N4M7 172 aa7.16□□□□□ -1.26
COL6A3-204ENST00000392003 KIF25-AS1Q9Y6Z4 181 aa7.16□□□□□ -1.26
COL6A3-204ENST00000392003 APCP25054 2843 aa7.16□□□□□ -1.26
COL6A3-204ENST00000392003 FSHBP01225 129 aa7.15□□□□□ -1.26
COL6A3-204ENST00000392003 ZFP2Q6ZN57 461 aa7.15□□□□□ -1.26
COL6A3-204ENST00000392003 LINC00336Q6ZUF6 198 aa7.15□□□□□ -1.26
COL6A3-204ENST00000392003 POM121L12Q8N7R1 296 aa7.15□□□□□ -1.26
COL6A3-204ENST00000392003 NEXN-AS1Q8NBZ9 246 aa7.15□□□□□ -1.26
COL6A3-204ENST00000392003 ATP6V0E2Q8NHE4 81 aa7.15□□□□□ -1.26
COL6A3-204ENST00000392003 C2orf48Q96LS8 159 aa7.15□□□□□ -1.26
COL6A3-204ENST00000392003 CYSTM1Q9H1C7 97 aa7.15□□□□□ -1.26
COL6A3-204ENST00000392003 PEMTQ9UBM1 199 aa7.15□□□□□ -1.26
COL6A3-204ENST00000392003 PSMB2P49721 201 aa7.15□□□□□ -1.26
COL6A3-204ENST00000392003 PAPPA-AS1Q5QFB9 102 aa7.15□□□□□ -1.26
COL6A3-204ENST00000392003 Q8N1Y9 231 aa7.15□□□□□ -1.26
COL6A3-204ENST00000392003 TP53TG1Q9Y2A0 90 aa7.15□□□□□ -1.26
COL6A3-204ENST00000392003 KMT2BQ9UMN6 2715 aaPredicted RBP7.15□□□□□ -1.26
COL6A3-204ENST00000392003 SDHAF1A6NFY7 115 aa7.15□□□□□ -1.27
COL6A3-204ENST00000392003 ANKRD29Q8N6D5 301 aa7.15□□□□□ -1.27
COL6A3-204ENST00000392003 DYNLRB2Q8TF09 96 aa7.15□□□□□ -1.27
COL6A3-204ENST00000392003 C9orf85Q96MD7 179 aa7.15□□□□□ -1.27
COL6A3-204ENST00000392003 HIST1H4GQ99525 98 aa7.15□□□□□ -1.27
COL6A3-204ENST00000392003 FAM236DA0A1B0GTK5 79 aa7.14□□□□□ -1.27
COL6A3-204ENST00000392003 FAM236CP0DP71 79 aa7.14□□□□□ -1.27
COL6A3-204ENST00000392003 LINC00315P59091 139 aa7.14□□□□□ -1.27
COL6A3-204ENST00000392003 HERVK_113P61574 105 aa7.14□□□□□ -1.27
COL6A3-204ENST00000392003 C12orf74Q32Q52 190 aa7.14□□□□□ -1.27
COL6A3-204ENST00000392003 CEMP1Q6PRD7 247 aaPredicted RBP7.14□□□□□ -1.27
COL6A3-204ENST00000392003 V9GYY9 64 aa7.14□□□□□ -1.27
COL6A3-204ENST00000392003 LINC01619G3V211 115 aa7.14□□□□□ -1.27
COL6A3-204ENST00000392003 TAL2Q16559 108 aa7.14□□□□□ -1.27
COL6A3-204ENST00000392003 KLHL30-AS1Q8NEE0 82 aa7.14□□□□□ -1.27
COL6A3-204ENST00000392003 ZNF256Q9Y2P7 627 aaPredicted RBP7.14□□□□□ -1.27
COL6A3-204ENST00000392003 POLR2KP53803 58 aaKnown RBP7.14□□□□□ -1.27
COL6A3-204ENST00000392003 SLURP1P55000 103 aa7.14□□□□□ -1.27
COL6A3-204ENST00000392003 DEFB131AP59861 70 aa7.14□□□□□ -1.27
COL6A3-204ENST00000392003 TEN1Q86WV5 123 aa7.14□□□□□ -1.27
COL6A3-204ENST00000392003 CEND1Q8N111 149 aa7.14□□□□□ -1.27
COL6A3-204ENST00000392003 RNF152Q8N8N0 203 aa7.14□□□□□ -1.27
COL6A3-204ENST00000392003 TMEM141Q96I45 108 aa7.14□□□□□ -1.27
COL6A3-204ENST00000392003 HTN1P15515 57 aa7.13□□□□□ -1.27
COL6A3-204ENST00000392003 RRN3P1Q2M238 152 aa7.13□□□□□ -1.27
COL6A3-204ENST00000392003 ZNF876PQ49A33 203 aa7.13□□□□□ -1.27
COL6A3-204ENST00000392003 C15orf53Q8NAA6 179 aa7.13□□□□□ -1.27
COL6A3-204ENST00000392003 MUC4Q99102 2169 aa7.13□□□□□ -1.27
COL6A3-204ENST00000392003 LOC107984156A0A0G2JMH3 177 aa7.13□□□□□ -1.27
COL6A3-204ENST00000392003 ARL17AQ8IVW1 177 aa7.13□□□□□ -1.27
COL6A3-204ENST00000392003 MAPKAPK5-AS1Q8N8E1 139 aa7.13□□□□□ -1.27
COL6A3-204ENST00000392003 DSCR8Q96T75 97 aa7.13□□□□□ -1.27
COL6A3-204ENST00000392003 MYMXA0A1B0GTQ4 84 aa7.13□□□□□ -1.27
COL6A3-204ENST00000392003 KNCNA6PVL3 124 aa7.13□□□□□ -1.27
COL6A3-204ENST00000392003 PMVKQ15126 192 aa7.13□□□□□ -1.27
COL6A3-204ENST00000392003 TRBV6-5A0A0K0K1A5 114 aa7.12□□□□□ -1.27
COL6A3-204ENST00000392003 A0A0U1RQV1 116 aa7.12□□□□□ -1.27
COL6A3-204ENST00000392003 ZNF415Q09FC8 603 aa7.12□□□□□ -1.27
COL6A3-204ENST00000392003 SCGB1D4Q6XE38 83 aa7.12□□□□□ -1.27
COL6A3-204ENST00000392003 DEFB104AQ8WTQ1 72 aa7.12□□□□□ -1.27
COL6A3-204ENST00000392003 DNAJC9-AS1A6NH13 148 aa7.12□□□□□ -1.27
COL6A3-204ENST00000392003 A0A0U1RRA0 63 aa7.11□□□□□ -1.27
COL6A3-204ENST00000392003 KRTAP1-3Q8IUG1 177 aa7.11□□□□□ -1.27
COL6A3-204ENST00000392003 TMEM86BQ8N661 226 aa7.11□□□□□ -1.27
COL6A3-204ENST00000392003 ITPR2Q14571 2701 aa7.11□□□□□ -1.27
COL6A3-204ENST00000392003 TRBV27A0A0K0K1C4 114 aa7.11□□□□□ -1.27
COL6A3-204ENST00000392003 HIST2H2BDQ6DRA6 164 aa7.11□□□□□ -1.27
COL6A3-204ENST00000392003 TIMM17AQ99595 171 aa7.11□□□□□ -1.27
COL6A3-204ENST00000392003 UNC79Q9P2D8 2635 aa7.11□□□□□ -1.27
COL6A3-204ENST00000392003 ZNF815PA8K554 130 aa7.11□□□□□ -1.27
COL6A3-204ENST00000392003 CRYGDP07320 174 aa7.11□□□□□ -1.27
COL6A3-204ENST00000392003 RHOHQ15669 191 aa7.11□□□□□ -1.27
COL6A3-204ENST00000392003 MORN3Q6PF18 240 aaPredicted RBP7.11□□□□□ -1.27
COL6A3-204ENST00000392003 C18orf65Q6ZTR6 163 aa7.11□□□□□ -1.27
COL6A3-204ENST00000392003 A0A1B0GX51 115 aa7.1□□□□□ -1.27
COL6A3-204ENST00000392003 M0QY20 66 aa7.1□□□□□ -1.27
COL6A3-204ENST00000392003 RPL39P62891 51 aaKnown RBP7.1□□□□□ -1.27
COL6A3-204ENST00000392003 Q8N2B8 174 aa7.1□□□□□ -1.27
COL6A3-204ENST00000392003 C4orf3Q8WVX3 66 aa7.1□□□□□ -1.27
COL6A3-204ENST00000392003 TRAV2A0A0B4J234 112 aa7.1□□□□□ -1.27
COL6A3-204ENST00000392003 MALP21145 153 aa7.1□□□□□ -1.27
COL6A3-204ENST00000392003 TMEM170BQ5T4T1 132 aa7.1□□□□□ -1.27
COL6A3-204ENST00000392003 Q6ZSV7 163 aa7.1□□□□□ -1.27
COL6A3-204ENST00000392003 PRO0628Q9UI54 55 aa7.1□□□□□ -1.27
COL6A3-204ENST00000392003 IGIPA6NJ69 53 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms