RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 RAB5CP51148 216 aa7.01□□□□□ -1.29
TRAV3-201ENST00000390425 DPH3P1Q9H4G8 78 aa7.01□□□□□ -1.29
TRAV3-201ENST00000390425 NIT2Q9NQR4 276 aa7.01□□□□□ -1.29
TRAV3-201ENST00000390425 A0A087WYN8 130 aa7□□□□□ -1.29
TRAV3-201ENST00000390425 F2Z2F3 143 aa7□□□□□ -1.29
TRAV3-201ENST00000390425 IFNA1P01562 189 aa7□□□□□ -1.29
TRAV3-201ENST00000390425 SULT1A2P50226 295 aa7□□□□□ -1.29
TRAV3-201ENST00000390425 SPACA4Q8TDM5 124 aa7□□□□□ -1.29
TRAV3-201ENST00000390425 CNFNQ9BYD5 112 aa7□□□□□ -1.29
TRAV3-201ENST00000390425 IGHV3-64A0A075B6Q5 118 aa6.99□□□□□ -1.29
TRAV3-201ENST00000390425 TRAV26-2A0A0B4J265 109 aa6.99□□□□□ -1.29
TRAV3-201ENST00000390425 BCL2P10415 239 aa6.99□□□□□ -1.29
TRAV3-201ENST00000390425 AMTP48728 403 aa6.99□□□□□ -1.29
TRAV3-201ENST00000390425 COTL1Q14019 142 aa6.99□□□□□ -1.29
TRAV3-201ENST00000390425 C9orf62Q8N4C0 152 aa6.99□□□□□ -1.29
TRAV3-201ENST00000390425 GATD1Q8NB37 220 aa6.99□□□□□ -1.29
TRAV3-201ENST00000390425 NUDT10Q8NFP7 164 aa6.99□□□□□ -1.29
TRAV3-201ENST00000390425 NUDT11Q96G61 164 aa6.99□□□□□ -1.29
TRAV3-201ENST00000390425 MED9Q9NWA0 146 aa6.99□□□□□ -1.29
TRAV3-201ENST00000390425 XKRY2A2RUG3 117 aa6.98□□□□□ -1.29
TRAV3-201ENST00000390425 K7EN84 100 aa6.98□□□□□ -1.29
TRAV3-201ENST00000390425 PDE6DO43924 150 aa6.98□□□□□ -1.29
TRAV3-201ENST00000390425 WDR73Q6P4I2 378 aa6.98□□□□□ -1.29
TRAV3-201ENST00000390425 Q6ZNX1 250 aa6.98□□□□□ -1.29
TRAV3-201ENST00000390425 RPL39LQ96EH5 51 aaKnown RBP6.98□□□□□ -1.29
TRAV3-201ENST00000390425 RNF185Q96GF1 192 aa6.98□□□□□ -1.29
TRAV3-201ENST00000390425 AP5S1Q9NUS5 200 aa6.98□□□□□ -1.29
TRAV3-201ENST00000390425 PLAC8Q9NZF1 115 aa6.98□□□□□ -1.29
TRAV3-201ENST00000390425 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.97□□□□□ -1.29
TRAV3-201ENST00000390425 GAGE12HA6NDE8 117 aa6.97□□□□□ -1.29
TRAV3-201ENST00000390425 UBE2L6O14933 153 aa6.97□□□□□ -1.29
TRAV3-201ENST00000390425 Q6ZRU5 148 aa6.97□□□□□ -1.29
TRAV3-201ENST00000390425 GTSF1Q8WW33 167 aa6.97□□□□□ -1.29
TRAV3-201ENST00000390425 RNASE7Q9H1E1 156 aaKnown RBP6.97□□□□□ -1.29
TRAV3-201ENST00000390425 IGKV3OR2-268A0A0C4DH90 116 aa6.96□□□□□ -1.3
TRAV3-201ENST00000390425 TEX46H3BTG2 121 aa6.96□□□□□ -1.3
TRAV3-201ENST00000390425 FOXA3P55318 350 aaPredicted RBP6.96□□□□□ -1.3
TRAV3-201ENST00000390425 TWIST1Q15672 202 aa6.96□□□□□ -1.3
TRAV3-201ENST00000390425 HIGD2BQ4VC39 106 aa6.96□□□□□ -1.3
TRAV3-201ENST00000390425 RPP21Q9H633 154 aaKnown RBP6.96□□□□□ -1.3
TRAV3-201ENST00000390425 BIN3Q9NQY0 253 aa6.96□□□□□ -1.3
TRAV3-201ENST00000390425 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.95□□□□□ -1.3
TRAV3-201ENST00000390425 IGKV2-29A2NJV5 120 aaPredicted RBP6.95□□□□□ -1.3
TRAV3-201ENST00000390425 PHOX2AO14813 284 aa6.95□□□□□ -1.3
TRAV3-201ENST00000390425 COX6A2Q02221 97 aa6.95□□□□□ -1.3
TRAV3-201ENST00000390425 EIF5AL1Q6IS14 154 aaKnown RBP6.95□□□□□ -1.3
TRAV3-201ENST00000390425 PRSS3P2Q8NHM4 247 aa6.95□□□□□ -1.3
TRAV3-201ENST00000390425 OCC1Q8TAD7 63 aa6.95□□□□□ -1.3
TRAV3-201ENST00000390425 CHCHD10Q8WYQ3 142 aaPredicted RBP6.95□□□□□ -1.3
TRAV3-201ENST00000390425 GVQW2A0A096LPI5 108 aaPredicted RBP6.94□□□□□ -1.3
TRAV3-201ENST00000390425 RPS10P46783 165 aaKnown RBP6.94□□□□□ -1.3
TRAV3-201ENST00000390425 IGKV2-24A0A0C4DH68 120 aa6.93□□□□□ -1.3
TRAV3-201ENST00000390425 FAM231BA6NCW3 169 aa6.93□□□□□ -1.3
TRAV3-201ENST00000390425 SDHAF1A6NFY7 115 aa6.93□□□□□ -1.3
TRAV3-201ENST00000390425 NDUFS6O75380 124 aaKnown RBP6.93□□□□□ -1.3
TRAV3-201ENST00000390425 GAS8-AS1O95177 125 aa6.93□□□□□ -1.3
TRAV3-201ENST00000390425 NCR2O95944 276 aa6.93□□□□□ -1.3
TRAV3-201ENST00000390425 APCSP02743 223 aa6.93□□□□□ -1.3
TRAV3-201ENST00000390425 FGF6P10767 208 aa6.93□□□□□ -1.3
TRAV3-201ENST00000390425 FOXI1Q12951 378 aa6.93□□□□□ -1.3
TRAV3-201ENST00000390425 RNASEKQ6P5S7 137 aaKnown RBP6.93□□□□□ -1.3
TRAV3-201ENST00000390425 TCTE3Q8IZS6 198 aa6.93□□□□□ -1.3
TRAV3-201ENST00000390425 DPH3Q96FX2 82 aa6.93□□□□□ -1.3
TRAV3-201ENST00000390425 A0A096LNI7 61 aa6.92□□□□□ -1.3
TRAV3-201ENST00000390425 H7C423 109 aa6.92□□□□□ -1.3
TRAV3-201ENST00000390425 PRR3P79522 188 aaKnown RBP6.92□□□□□ -1.3
TRAV3-201ENST00000390425 MAJINQ3KP22 176 aa6.92□□□□□ -1.3
TRAV3-201ENST00000390425 AMMECR1LQ6DCA0 310 aa6.92□□□□□ -1.3
TRAV3-201ENST00000390425 CFAP161Q6P656 301 aa6.92□□□□□ -1.3
TRAV3-201ENST00000390425 SLC51BQ86UW2 128 aa6.92□□□□□ -1.3
TRAV3-201ENST00000390425 TRBV6-5A0A0K0K1A5 114 aa6.91□□□□□ -1.3
TRAV3-201ENST00000390425 ESDP10768 282 aa6.91□□□□□ -1.3
TRAV3-201ENST00000390425 TAGLN2P37802 199 aaKnown RBP6.91□□□□□ -1.3
TRAV3-201ENST00000390425 ODF1Q14990 250 aa6.91□□□□□ -1.3
TRAV3-201ENST00000390425 LINC00526Q96FQ7 95 aa6.91□□□□□ -1.3
TRAV3-201ENST00000390425 TSHBP01222 138 aa6.9□□□□□ -1.3
TRAV3-201ENST00000390425 ZNF25P17030 456 aaPredicted RBP6.9□□□□□ -1.3
TRAV3-201ENST00000390425 FAM231DQ6ZW35 169 aa6.9□□□□□ -1.3
TRAV3-201ENST00000390425 STPG4Q8N801 248 aa6.9□□□□□ -1.3
TRAV3-201ENST00000390425 OR5A1Q8NGJ0 315 aa6.9□□□□□ -1.3
TRAV3-201ENST00000390425 C7orf33Q8WU49 177 aa6.9□□□□□ -1.3
TRAV3-201ENST00000390425 LINC00959A0A1B0GUT2 108 aa6.89□□□□□ -1.31
TRAV3-201ENST00000390425 TMEM250H0YL14 139 aa6.89□□□□□ -1.31
TRAV3-201ENST00000390425 I3L3M4 83 aa6.89□□□□□ -1.31
TRAV3-201ENST00000390425 CCL25O15444 150 aa6.89□□□□□ -1.31
TRAV3-201ENST00000390425 GATCO43716 136 aaKnown RBP6.89□□□□□ -1.31
TRAV3-201ENST00000390425 XCL1P47992 114 aa6.89□□□□□ -1.31
TRAV3-201ENST00000390425 TEX261Q6UWH6 196 aa6.89□□□□□ -1.31
TRAV3-201ENST00000390425 SMIM15Q7Z3B0 74 aa6.89□□□□□ -1.31
TRAV3-201ENST00000390425 TMEM242Q9NWH2 141 aa6.89□□□□□ -1.31
TRAV3-201ENST00000390425 PMCHP20382 165 aa6.88□□□□□ -1.31
TRAV3-201ENST00000390425 CT83Q5H943 113 aa6.88□□□□□ -1.31
TRAV3-201ENST00000390425 LYPD6BQ8NI32 183 aa6.88□□□□□ -1.31
TRAV3-201ENST00000390425 LINC01600Q96MT4 127 aa6.88□□□□□ -1.31
TRAV3-201ENST00000390425 IGHV1-58A0A0C4DH39 117 aa6.87□□□□□ -1.31
TRAV3-201ENST00000390425 A8MWL6 223 aa6.87□□□□□ -1.31
TRAV3-201ENST00000390425 POLR2KP53803 58 aaKnown RBP6.87□□□□□ -1.31
TRAV3-201ENST00000390425 CARD19Q96LW7 228 aa6.87□□□□□ -1.31
TRAV3-201ENST00000390425 ALKAL2Q6UX46 152 aa6.86□□□□□ -1.31
TRAV3-201ENST00000390425 MRPL52Q86TS9 123 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms