RNA–Protein interactions for RNA: ENST00000390387.3

TRBV3-1-201, Transcript of T cell receptor beta variable 3-1, humanhuman

APPRIS P1 BASIC

Gene TRBV3-1, Length 391 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV3-1-201ENST00000390387 RAB5CP51148 216 aa5.87□□□□□ -1.47
TRBV3-1-201ENST00000390387 C7orf33Q8WU49 177 aa5.87□□□□□ -1.47
TRBV3-1-201ENST00000390387 KRTAP4-9Q9BYQ8 210 aa5.87□□□□□ -1.47
TRBV3-1-201ENST00000390387 CDIP1Q9H305 208 aa5.87□□□□□ -1.47
TRBV3-1-201ENST00000390387 CYTL1Q9NRR1 136 aa5.87□□□□□ -1.47
TRBV3-1-201ENST00000390387 G3V3Q6 166 aa5.86□□□□□ -1.47
TRBV3-1-201ENST00000390387 GZMBP10144 247 aa5.86□□□□□ -1.47
TRBV3-1-201ENST00000390387 COX6A2Q02221 97 aa5.86□□□□□ -1.47
TRBV3-1-201ENST00000390387 SUMO4Q6EEV6 95 aa5.86□□□□□ -1.47
TRBV3-1-201ENST00000390387 BAGE2Q86Y30 109 aa5.86□□□□□ -1.47
TRBV3-1-201ENST00000390387 C15orf56Q8N910 161 aa5.86□□□□□ -1.47
TRBV3-1-201ENST00000390387 TMEM243Q9BU79 118 aa5.86□□□□□ -1.47
TRBV3-1-201ENST00000390387 DPH3P1Q9H4G8 78 aa5.86□□□□□ -1.47
TRBV3-1-201ENST00000390387 H7C1H1 209 aa5.85□□□□□ -1.47
TRBV3-1-201ENST00000390387 MGPP08493 103 aa5.85□□□□□ -1.47
TRBV3-1-201ENST00000390387 NKX2-5P52952 324 aaPredicted RBP5.85□□□□□ -1.47
TRBV3-1-201ENST00000390387 PRR3P79522 188 aaKnown RBP5.85□□□□□ -1.47
TRBV3-1-201ENST00000390387 IGKV2-24A0A0C4DH68 120 aa5.84□□□□□ -1.47
TRBV3-1-201ENST00000390387 NDUFS6O75380 124 aaKnown RBP5.84□□□□□ -1.47
TRBV3-1-201ENST00000390387 IGLC6P0CF74 106 aa5.84□□□□□ -1.47
TRBV3-1-201ENST00000390387 MAJINQ3KP22 176 aa5.84□□□□□ -1.47
TRBV3-1-201ENST00000390387 WDR73Q6P4I2 378 aa5.84□□□□□ -1.47
TRBV3-1-201ENST00000390387 PRSS3P2Q8NHM4 247 aa5.84□□□□□ -1.47
TRBV3-1-201ENST00000390387 GTSF1Q8WW33 167 aa5.84□□□□□ -1.47
TRBV3-1-201ENST00000390387 MBD3L1Q8WWY6 194 aa5.84□□□□□ -1.47
TRBV3-1-201ENST00000390387 PGLYRP4Q96LB8 373 aa5.84□□□□□ -1.47
TRBV3-1-201ENST00000390387 A0A0J9YXV3 536 aa5.83□□□□□ -1.48
TRBV3-1-201ENST00000390387 A0A1B0GV50 99 aa5.83□□□□□ -1.48
TRBV3-1-201ENST00000390387 GAGE12HA6NDE8 117 aa5.83□□□□□ -1.48
TRBV3-1-201ENST00000390387 ARPC5O15511 151 aa5.83□□□□□ -1.48
TRBV3-1-201ENST00000390387 PFDN1O60925 122 aa5.83□□□□□ -1.48
TRBV3-1-201ENST00000390387 TNFRSF6BO95407 300 aa5.83□□□□□ -1.48
TRBV3-1-201ENST00000390387 RPL35P42766 123 aaKnown RBP5.83□□□□□ -1.48
TRBV3-1-201ENST00000390387 RPS10P46783 165 aaKnown RBP5.83□□□□□ -1.48
TRBV3-1-201ENST00000390387 KRTAP10-8P60410 259 aa5.83□□□□□ -1.48
TRBV3-1-201ENST00000390387 HIGD2BQ4VC39 106 aa5.83□□□□□ -1.48
TRBV3-1-201ENST00000390387 RASL11AQ6T310 242 aa5.83□□□□□ -1.48
TRBV3-1-201ENST00000390387 TMUB2Q71RG4 321 aa5.83□□□□□ -1.48
TRBV3-1-201ENST00000390387 STPG4Q8N801 248 aa5.83□□□□□ -1.48
TRBV3-1-201ENST00000390387 FER1L6-AS1Q8NA97 138 aa5.83□□□□□ -1.48
TRBV3-1-201ENST00000390387 SFT2D1Q8WV19 159 aa5.83□□□□□ -1.48
TRBV3-1-201ENST00000390387 TPPP3Q9BW30 176 aa5.83□□□□□ -1.48
TRBV3-1-201ENST00000390387 UBE2L6O14933 153 aa5.82□□□□□ -1.48
TRBV3-1-201ENST00000390387 SULT1A2P50226 295 aa5.82□□□□□ -1.48
TRBV3-1-201ENST00000390387 FAM213BQ8TBF2 198 aa5.82□□□□□ -1.48
TRBV3-1-201ENST00000390387 NIT2Q9NQR4 276 aa5.82□□□□□ -1.48
TRBV3-1-201ENST00000390387 A0A096LNI7 61 aa5.81□□□□□ -1.48
TRBV3-1-201ENST00000390387 GVQW2A0A096LPI5 108 aaPredicted RBP5.81□□□□□ -1.48
TRBV3-1-201ENST00000390387 IGKV3OR2-268A0A0C4DH90 116 aa5.81□□□□□ -1.48
TRBV3-1-201ENST00000390387 AMTP48728 403 aa5.81□□□□□ -1.48
TRBV3-1-201ENST00000390387 CACNG7P62955 275 aa5.81□□□□□ -1.48
TRBV3-1-201ENST00000390387 KCNRGQ8N5I3 272 aa5.81□□□□□ -1.48
TRBV3-1-201ENST00000390387 LYPD6BQ8NI32 183 aa5.81□□□□□ -1.48
TRBV3-1-201ENST00000390387 C19orf71A6NCJ1 209 aa5.8□□□□□ -1.48
TRBV3-1-201ENST00000390387 UMAD1C9J7I0 102 aa5.8□□□□□ -1.48
TRBV3-1-201ENST00000390387 RPS20P60866 119 aaKnown RBP5.8□□□□□ -1.48
TRBV3-1-201ENST00000390387 COTL1Q14019 142 aa5.8□□□□□ -1.48
TRBV3-1-201ENST00000390387 CENPWQ5EE01 88 aa5.8□□□□□ -1.48
TRBV3-1-201ENST00000390387 SPINK6Q6UWN8 80 aa5.8□□□□□ -1.48
TRBV3-1-201ENST00000390387 OR2D3Q8NGH3 330 aa5.8□□□□□ -1.48
TRBV3-1-201ENST00000390387 CHCHD10Q8WYQ3 142 aaPredicted RBP5.8□□□□□ -1.48
TRBV3-1-201ENST00000390387 C11orf52Q96A22 123 aa5.8□□□□□ -1.48
TRBV3-1-201ENST00000390387 KRTAP4-2Q9BYR5 136 aa5.8□□□□□ -1.48
TRBV3-1-201ENST00000390387 TRGC1P0CF51 173 aa5.79□□□□□ -1.48
TRBV3-1-201ENST00000390387 SRSF9Q13242 221 aaKnown RBP eCLIP5.79□□□□□ -1.48
TRBV3-1-201ENST00000390387 REG3GQ6UW15 175 aa5.79□□□□□ -1.48
TRBV3-1-201ENST00000390387 LYZL1Q6UWQ5 148 aa5.79□□□□□ -1.48
TRBV3-1-201ENST00000390387 F2Z2F3 143 aa5.78□□□□□ -1.48
TRBV3-1-201ENST00000390387 SMLR1H3BR10 107 aa5.78□□□□□ -1.48
TRBV3-1-201ENST00000390387 GAS8-AS1O95177 125 aa5.78□□□□□ -1.48
TRBV3-1-201ENST00000390387 SCGB1D1O95968 90 aa5.78□□□□□ -1.48
TRBV3-1-201ENST00000390387 NTF3P20783 257 aa5.78□□□□□ -1.48
TRBV3-1-201ENST00000390387 FOXI1Q12951 378 aa5.78□□□□□ -1.48
TRBV3-1-201ENST00000390387 ZNF345Q14585 488 aa5.78□□□□□ -1.48
TRBV3-1-201ENST00000390387 Q6ZNX1 250 aa5.78□□□□□ -1.48
TRBV3-1-201ENST00000390387 GATD1Q8NB37 220 aa5.78□□□□□ -1.48
TRBV3-1-201ENST00000390387 MUC2Q02817 5179 aa5.77□□□□□ -1.49
TRBV3-1-201ENST00000390387 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.77□□□□□ -1.49
TRBV3-1-201ENST00000390387 TRAV26-2A0A0B4J265 109 aa5.77□□□□□ -1.49
TRBV3-1-201ENST00000390387 IGKV2-29A2NJV5 120 aaPredicted RBP5.77□□□□□ -1.49
TRBV3-1-201ENST00000390387 RAB19A4D1S5 217 aa5.77□□□□□ -1.49
TRBV3-1-201ENST00000390387 CTRLP40313 264 aa5.77□□□□□ -1.49
TRBV3-1-201ENST00000390387 CCL20P78556 96 aa5.77□□□□□ -1.49
TRBV3-1-201ENST00000390387 AMMECR1LQ6DCA0 310 aa5.77□□□□□ -1.49
TRBV3-1-201ENST00000390387 Q6ZRP5 223 aa5.77□□□□□ -1.49
TRBV3-1-201ENST00000390387 LINC00526Q96FQ7 95 aa5.77□□□□□ -1.49
TRBV3-1-201ENST00000390387 CNFNQ9BYD5 112 aa5.77□□□□□ -1.49
TRBV3-1-201ENST00000390387 MANBALQ9NQG1 85 aa5.77□□□□□ -1.49
TRBV3-1-201ENST00000390387 LINC00474Q9P2X8 69 aa5.77□□□□□ -1.49
TRBV3-1-201ENST00000390387 TRBV20OR9-2A0A075B6H5 130 aa5.76□□□□□ -1.49
TRBV3-1-201ENST00000390387 XKRY2A2RUG3 117 aa5.76□□□□□ -1.49
TRBV3-1-201ENST00000390387 NCR2O95944 276 aa5.76□□□□□ -1.49
TRBV3-1-201ENST00000390387 IFNA1P01562 189 aa5.76□□□□□ -1.49
TRBV3-1-201ENST00000390387 FGF6P10767 208 aa5.76□□□□□ -1.49
TRBV3-1-201ENST00000390387 GNG4P50150 75 aa5.76□□□□□ -1.49
TRBV3-1-201ENST00000390387 RNASEKQ6P5S7 137 aaKnown RBP5.76□□□□□ -1.49
TRBV3-1-201ENST00000390387 C9orf62Q8N4C0 152 aa5.76□□□□□ -1.49
TRBV3-1-201ENST00000390387 RPL39LQ96EH5 51 aaKnown RBP5.76□□□□□ -1.49
TRBV3-1-201ENST00000390387 SMIM12Q96EX1 92 aa5.76□□□□□ -1.49
TRBV3-1-201ENST00000390387 GNG13Q9P2W3 67 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 254.3 ms