RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 TRAV8-6A0A0B4J262 113 aa13.09□□□□□ -0.31
ACTN4-202ENST00000390009 Q6ZTI0 123 aa13.09□□□□□ -0.31
ACTN4-202ENST00000390009 SPATA3Q8NHX4 192 aa13.09□□□□□ -0.31
ACTN4-202ENST00000390009 IGLV4-69A0A075B6H9 119 aa13.08□□□□□ -0.32
ACTN4-202ENST00000390009 TMEM97Q5BJF2 176 aa13.08□□□□□ -0.32
ACTN4-202ENST00000390009 C16orf74Q96GX8 76 aa13.08□□□□□ -0.32
ACTN4-202ENST00000390009 DNAJC30Q96LL9 226 aa13.08□□□□□ -0.32
ACTN4-202ENST00000390009 GAGE12BA1L429 117 aa13.07□□□□□ -0.32
ACTN4-202ENST00000390009 INSL3P51460 131 aa13.07□□□□□ -0.32
ACTN4-202ENST00000390009 NOP10Q9NPE3 64 aaKnown RBP13.07□□□□□ -0.32
ACTN4-202ENST00000390009 DAZ2Q13117 558 aaKnown RBP13.07□□□□□ -0.32
ACTN4-202ENST00000390009 ZNF479Q96JC4 524 aa13.07□□□□□ -0.32
ACTN4-202ENST00000390009 PLAC8L1A1L4L8 177 aa13.06□□□□□ -0.32
ACTN4-202ENST00000390009 C9orf66Q5T8R8 295 aa13.06□□□□□ -0.32
ACTN4-202ENST00000390009 OPRPNQ99935 248 aaPredicted RBP13.06□□□□□ -0.32
ACTN4-202ENST00000390009 CITED1Q99966 193 aa13.06□□□□□ -0.32
ACTN4-202ENST00000390009 C11orf86A6NJI1 115 aa13.06□□□□□ -0.32
ACTN4-202ENST00000390009 EMP1P54849 157 aa13.06□□□□□ -0.32
ACTN4-202ENST00000390009 HSD52Q0P140 79 aa13.06□□□□□ -0.32
ACTN4-202ENST00000390009 VWFP04275 2813 aa13.05□□□□□ -0.32
ACTN4-202ENST00000390009 RRN3P1Q2M238 152 aa13.05□□□□□ -0.32
ACTN4-202ENST00000390009 PAPPA-AS1Q5QFB9 102 aa13.05□□□□□ -0.32
ACTN4-202ENST00000390009 TENM1Q9UKZ4 2725 aa13.05□□□□□ -0.32
ACTN4-202ENST00000390009 TRBV25-1A0A075B6N4 114 aa13.04□□□□□ -0.32
ACTN4-202ENST00000390009 TRAV4A0A0B4J268 109 aa13.04□□□□□ -0.32
ACTN4-202ENST00000390009 K7ERU9 68 aa13.04□□□□□ -0.32
ACTN4-202ENST00000390009 SEC11AP67812 179 aa13.04□□□□□ -0.32
ACTN4-202ENST00000390009 MAPKAPK5-AS1Q8N8E1 139 aa13.04□□□□□ -0.32
ACTN4-202ENST00000390009 HIGD1BQ9P298 99 aa13.04□□□□□ -0.32
ACTN4-202ENST00000390009 E9PLD3 99 aa13.03□□□□□ -0.32
ACTN4-202ENST00000390009 OR11H2Q8NH07 326 aa13.03□□□□□ -0.32
ACTN4-202ENST00000390009 PHLDA1Q8WV24 401 aaPredicted RBP13.03□□□□□ -0.32
ACTN4-202ENST00000390009 IGLV4-3A0A075B6K6 122 aa13.03□□□□□ -0.32
ACTN4-202ENST00000390009 IGHV3-38A0A0C4DH36 116 aa13.03□□□□□ -0.32
ACTN4-202ENST00000390009 CHCHD7Q9BUK0 85 aa13.03□□□□□ -0.32
ACTN4-202ENST00000390009 F8P00451 2351 aa13.02□□□□□ -0.32
ACTN4-202ENST00000390009 CHAC1Q9BUX1 264 aa13.02□□□□□ -0.33
ACTN4-202ENST00000390009 PYGO1Q9Y3Y4 419 aa13.02□□□□□ -0.33
ACTN4-202ENST00000390009 ZNRF2Q8NHG8 242 aa13.01□□□□□ -0.33
ACTN4-202ENST00000390009 PRADC1Q9BSG0 188 aa13.01□□□□□ -0.33
ACTN4-202ENST00000390009 ATRQ13535 2644 aa13.01□□□□□ -0.33
ACTN4-202ENST00000390009 GAGE10A6NGK3 116 aa13.01□□□□□ -0.33
ACTN4-202ENST00000390009 K7EQD1 137 aa13.01□□□□□ -0.33
ACTN4-202ENST00000390009 OVOL2Q9BRP0 275 aa13.01□□□□□ -0.33
ACTN4-202ENST00000390009 TEP1Q99973 2627 aaKnown RBP13.01□□□□□ -0.33
ACTN4-202ENST00000390009 GAGE7O76087 117 aa13□□□□□ -0.33
ACTN4-202ENST00000390009 GAGE12FP0CL80 117 aa13□□□□□ -0.33
ACTN4-202ENST00000390009 GAGE12GP0CL81 117 aa13□□□□□ -0.33
ACTN4-202ENST00000390009 GAGE12IP0CL82 117 aa13□□□□□ -0.33
ACTN4-202ENST00000390009 VCX2Q9H322 139 aa13□□□□□ -0.33
ACTN4-202ENST00000390009 TRBV7-3A0A075B6L6 115 aa13□□□□□ -0.33
ACTN4-202ENST00000390009 TRGV2A0A075B6R0 118 aa12.99□□□□□ -0.33
ACTN4-202ENST00000390009 TRBV10-1A0A0K0K1A3 114 aa12.99□□□□□ -0.33
ACTN4-202ENST00000390009 CEMP1Q6PRD7 247 aaPredicted RBP12.99□□□□□ -0.33
ACTN4-202ENST00000390009 NFE4Q86UQ8 179 aa12.99□□□□□ -0.33
ACTN4-202ENST00000390009 FAM104AQ969W3 186 aa12.99□□□□□ -0.33
ACTN4-202ENST00000390009 MYMXA0A1B0GTQ4 84 aa12.98□□□□□ -0.33
ACTN4-202ENST00000390009 HERVK_113P61574 105 aa12.98□□□□□ -0.33
ACTN4-202ENST00000390009 TMEM170BQ5T4T1 132 aa12.98□□□□□ -0.33
ACTN4-202ENST00000390009 SLC25A29Q8N8R3 303 aa12.98□□□□□ -0.33
ACTN4-202ENST00000390009 FLNBO75369 2602 aaKnown RBP12.98□□□□□ -0.33
ACTN4-202ENST00000390009 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.98□□□□□ -0.33
ACTN4-202ENST00000390009 IGKV2-29A2NJV5 120 aaPredicted RBP12.98□□□□□ -0.33
ACTN4-202ENST00000390009 A6NDN8 102 aa12.98□□□□□ -0.33
ACTN4-202ENST00000390009 C9orf118A6NHY6 69 aa12.98□□□□□ -0.33
ACTN4-202ENST00000390009 H3BRM9 83 aa12.98□□□□□ -0.33
ACTN4-202ENST00000390009 RPL36AP83881 106 aaKnown RBP12.98□□□□□ -0.33
ACTN4-202ENST00000390009 GTF2H5Q6ZYL4 71 aa12.98□□□□□ -0.33
ACTN4-202ENST00000390009 RPL36ALQ969Q0 106 aaKnown RBP12.98□□□□□ -0.33
ACTN4-202ENST00000390009 UBE2D4Q9Y2X8 147 aa12.98□□□□□ -0.33
ACTN4-202ENST00000390009 AMELXQ99217 191 aa12.97□□□□□ -0.33
ACTN4-202ENST00000390009 SPANXA1Q9NS26 97 aa12.97□□□□□ -0.33
ACTN4-202ENST00000390009 CRYBA4P53673 196 aa12.96□□□□□ -0.33
ACTN4-202ENST00000390009 H3BUT2 72 aa12.95□□□□□ -0.34
ACTN4-202ENST00000390009 K7EP34 96 aa12.95□□□□□ -0.34
ACTN4-202ENST00000390009 CIDEAO60543 219 aa12.95□□□□□ -0.34
ACTN4-202ENST00000390009 GCSHP23434 173 aa12.95□□□□□ -0.34
ACTN4-202ENST00000390009 A0A0J9YXV3 536 aa12.94□□□□□ -0.34
ACTN4-202ENST00000390009 ZNF815PA8K554 130 aa12.94□□□□□ -0.34
ACTN4-202ENST00000390009 RNASE13Q5GAN3 156 aaKnown RBP12.94□□□□□ -0.34
ACTN4-202ENST00000390009 GAGE12JA6NER3 117 aa12.94□□□□□ -0.34
ACTN4-202ENST00000390009 UBE2D3P61077 147 aa12.94□□□□□ -0.34
ACTN4-202ENST00000390009 UBE2D2P62837 147 aa12.94□□□□□ -0.34
ACTN4-202ENST00000390009 GAGE4Q13068 117 aa12.94□□□□□ -0.34
ACTN4-202ENST00000390009 GAGE5Q13069 117 aa12.94□□□□□ -0.34
ACTN4-202ENST00000390009 GAGE13Q4V321 117 aa12.94□□□□□ -0.34
ACTN4-202ENST00000390009 DAZ4Q86SG3 579 aaKnown RBP12.94□□□□□ -0.34
ACTN4-202ENST00000390009 DAZ3Q9NR90 486 aaKnown RBP12.94□□□□□ -0.34
ACTN4-202ENST00000390009 FXYD2P54710 66 aa12.93□□□□□ -0.34
ACTN4-202ENST00000390009 NAA38Q9BRA0 125 aaKnown RBP12.93□□□□□ -0.34
ACTN4-202ENST00000390009 ZNF22P17026 224 aaPredicted RBP12.92□□□□□ -0.34
ACTN4-202ENST00000390009 CEND1Q8N111 149 aa12.92□□□□□ -0.34
ACTN4-202ENST00000390009 WFDC9Q8NEX5 89 aa12.92□□□□□ -0.34
ACTN4-202ENST00000390009 TRBV6-4A0A1B0GX49 114 aa12.92□□□□□ -0.34
ACTN4-202ENST00000390009 TAL2Q16559 108 aa12.92□□□□□ -0.34
ACTN4-202ENST00000390009 Q6ZUT4 128 aa12.92□□□□□ -0.34
ACTN4-202ENST00000390009 X6R8D5 127 aa12.92□□□□□ -0.34
ACTN4-202ENST00000390009 TRGV4A0A0C4DH28 118 aa12.91□□□□□ -0.34
ACTN4-202ENST00000390009 TMEM223A0PJW6 202 aa12.91□□□□□ -0.34
ACTN4-202ENST00000390009 MRPS36P82909 103 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms