RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 FAM19A4Q96LR4 140 aa8.72□□□□□ -1.01
RAPGEF3-201ENST00000389212 PRO1854Q9UHT4 67 aa8.72□□□□□ -1.01
RAPGEF3-201ENST00000389212 F5H697 171 aa8.72□□□□□ -1.01
RAPGEF3-201ENST00000389212 CFHR3Q02985 330 aa8.72□□□□□ -1.01
RAPGEF3-201ENST00000389212 Q6Q795 121 aa8.72□□□□□ -1.01
RAPGEF3-201ENST00000389212 TEX15Q9BXT5 2789 aa8.71□□□□□ -1.01
RAPGEF3-201ENST00000389212 UQCRQO14949 82 aa8.71□□□□□ -1.01
RAPGEF3-201ENST00000389212 SYNJ2BPP57105 145 aa8.71□□□□□ -1.01
RAPGEF3-201ENST00000389212 C2orf66Q6UXQ4 117 aa8.71□□□□□ -1.01
RAPGEF3-201ENST00000389212 DCANP1Q8TF63 244 aa8.71□□□□□ -1.01
RAPGEF3-201ENST00000389212 H3BUA1 57 aa8.71□□□□□ -1.02
RAPGEF3-201ENST00000389212 NOTCH3Q9UM47 2321 aa8.71□□□□□ -1.02
RAPGEF3-201ENST00000389212 SETD2Q9BYW2 2564 aaPredicted RBP8.71□□□□□ -1.02
RAPGEF3-201ENST00000389212 USP24Q9UPU5 2620 aa8.71□□□□□ -1.02
RAPGEF3-201ENST00000389212 TINCRA0A1B0GVN0 87 aa8.7□□□□□ -1.02
RAPGEF3-201ENST00000389212 PSMB8P28062 276 aa8.7□□□□□ -1.02
RAPGEF3-201ENST00000389212 SPINK13Q1W4C9 94 aa8.7□□□□□ -1.02
RAPGEF3-201ENST00000389212 HTN1P15515 57 aa8.69□□□□□ -1.02
RAPGEF3-201ENST00000389212 RPL39P62891 51 aaKnown RBP8.69□□□□□ -1.02
RAPGEF3-201ENST00000389212 LINC01620Q4KN68 170 aa8.69□□□□□ -1.02
RAPGEF3-201ENST00000389212 WNK1Q9H4A3 2382 aa8.69□□□□□ -1.02
RAPGEF3-201ENST00000389212 IGHV3-64A0A075B6Q5 118 aa8.69□□□□□ -1.02
RAPGEF3-201ENST00000389212 F8VRH5 84 aa8.69□□□□□ -1.02
RAPGEF3-201ENST00000389212 UBE2D3P61077 147 aa8.69□□□□□ -1.02
RAPGEF3-201ENST00000389212 UBE2D2P62837 147 aa8.69□□□□□ -1.02
RAPGEF3-201ENST00000389212 ORMDL2Q53FV1 153 aa8.69□□□□□ -1.02
RAPGEF3-201ENST00000389212 BAALCQ8WXS3 180 aa8.69□□□□□ -1.02
RAPGEF3-201ENST00000389212 TOMM6Q96B49 74 aa8.69□□□□□ -1.02
RAPGEF3-201ENST00000389212 H7C1H1 209 aa8.69□□□□□ -1.02
RAPGEF3-201ENST00000389212 PLNP26678 52 aa8.69□□□□□ -1.02
RAPGEF3-201ENST00000389212 ATXN8Q156A1 80 aa8.69□□□□□ -1.02
RAPGEF3-201ENST00000389212 DEFB136Q30KP8 78 aa8.69□□□□□ -1.02
RAPGEF3-201ENST00000389212 WFDC11Q8NEX6 87 aa8.69□□□□□ -1.02
RAPGEF3-201ENST00000389212 CCDC168Q8NDH2 2452 aa8.68□□□□□ -1.02
RAPGEF3-201ENST00000389212 TRAV8-3A0A0A6YYJ7 113 aa8.68□□□□□ -1.02
RAPGEF3-201ENST00000389212 TRAV13-1A0A0B4J241 112 aa8.68□□□□□ -1.02
RAPGEF3-201ENST00000389212 KLLNB2CW77 178 aa8.68□□□□□ -1.02
RAPGEF3-201ENST00000389212 LINC00315P59091 139 aa8.68□□□□□ -1.02
RAPGEF3-201ENST00000389212 SUMO4Q6EEV6 95 aa8.68□□□□□ -1.02
RAPGEF3-201ENST00000389212 C18orf65Q6ZTR6 163 aa8.68□□□□□ -1.02
RAPGEF3-201ENST00000389212 PRM2P04554 102 aa8.68□□□□□ -1.02
RAPGEF3-201ENST00000389212 EPG5Q9HCE0 2579 aa8.68□□□□□ -1.02
RAPGEF3-201ENST00000389212 NACAE9PAV3 2078 aa8.68□□□□□ -1.02
RAPGEF3-201ENST00000389212 IGHV4OR15-8A0A075B7B6 117 aa8.67□□□□□ -1.02
RAPGEF3-201ENST00000389212 A0A087WW49 117 aa8.67□□□□□ -1.02
RAPGEF3-201ENST00000389212 M0R2P5 195 aa8.67□□□□□ -1.02
RAPGEF3-201ENST00000389212 CFC1BP0CG36 223 aa8.67□□□□□ -1.02
RAPGEF3-201ENST00000389212 CFC1P0CG37 223 aa8.67□□□□□ -1.02
RAPGEF3-201ENST00000389212 NEXN-AS1Q8NBZ9 246 aa8.67□□□□□ -1.02
RAPGEF3-201ENST00000389212 LGALS9O00182 355 aa8.67□□□□□ -1.02
RAPGEF3-201ENST00000389212 NPC2P61916 151 aa8.67□□□□□ -1.02
RAPGEF3-201ENST00000389212 APRG1Q8IVJ8 170 aa8.67□□□□□ -1.02
RAPGEF3-201ENST00000389212 MRAPQ8TCY5 172 aa8.67□□□□□ -1.02
RAPGEF3-201ENST00000389212 TP53TG1Q9Y2A0 90 aa8.67□□□□□ -1.02
RAPGEF3-201ENST00000389212 KIF25-AS1Q9Y6Z4 181 aa8.67□□□□□ -1.02
RAPGEF3-201ENST00000389212 KRTAP10-9P60411 292 aa8.66□□□□□ -1.02
RAPGEF3-201ENST00000389212 CIRBPQ14011 172 aaKnown RBP8.66□□□□□ -1.02
RAPGEF3-201ENST00000389212 LINC01356Q8N9X3 169 aa8.66□□□□□ -1.02
RAPGEF3-201ENST00000389212 V9GYY9 64 aa8.66□□□□□ -1.02
RAPGEF3-201ENST00000389212 FAM236DA0A1B0GTK5 79 aa8.65□□□□□ -1.02
RAPGEF3-201ENST00000389212 K7EMT4 169 aa8.65□□□□□ -1.02
RAPGEF3-201ENST00000389212 TSHBP01222 138 aa8.65□□□□□ -1.02
RAPGEF3-201ENST00000389212 FAM236CP0DP71 79 aa8.65□□□□□ -1.02
RAPGEF3-201ENST00000389212 OPRPNQ99935 248 aaPredicted RBP8.65□□□□□ -1.02
RAPGEF3-201ENST00000389212 PRRC2AP48634 2157 aaKnown RBP8.65□□□□□ -1.03
RAPGEF3-201ENST00000389212 IGHV3-73A0A0B4J1V6 119 aa8.65□□□□□ -1.03
RAPGEF3-201ENST00000389212 SDHAF1A6NFY7 115 aa8.65□□□□□ -1.03
RAPGEF3-201ENST00000389212 ZNF469Q96JG9 3925 aaPredicted RBP8.65□□□□□ -1.03
RAPGEF3-201ENST00000389212 TRAV12-1A0A0B4J245 112 aa8.64□□□□□ -1.03
RAPGEF3-201ENST00000389212 A0A0J9YX75 114 aa8.64□□□□□ -1.03
RAPGEF3-201ENST00000389212 KNCNA6PVL3 124 aa8.64□□□□□ -1.03
RAPGEF3-201ENST00000389212 HOXD3P31249 432 aaPredicted RBP8.64□□□□□ -1.03
RAPGEF3-201ENST00000389212 UBE2D1P51668 147 aa8.64□□□□□ -1.03
RAPGEF3-201ENST00000389212 LINC00526Q96FQ7 95 aa8.64□□□□□ -1.03
RAPGEF3-201ENST00000389212 CRYGDP07320 174 aa8.64□□□□□ -1.03
RAPGEF3-201ENST00000389212 MED14OSP0DP75 135 aa8.64□□□□□ -1.03
RAPGEF3-201ENST00000389212 SLURP1P55000 103 aa8.64□□□□□ -1.03
RAPGEF3-201ENST00000389212 SNRPD3P62318 126 aaKnown RBP8.64□□□□□ -1.03
RAPGEF3-201ENST00000389212 IGHV3-16A0A0C4DH30 117 aa8.63□□□□□ -1.03
RAPGEF3-201ENST00000389212 C11orf86A6NJI1 115 aa8.63□□□□□ -1.03
RAPGEF3-201ENST00000389212 ELANEP08246 267 aa8.63□□□□□ -1.03
RAPGEF3-201ENST00000389212 BBC3Q96PG8 261 aaPredicted RBP8.63□□□□□ -1.03
RAPGEF3-201ENST00000389212 A0A096LNT2 108 aa8.63□□□□□ -1.03
RAPGEF3-201ENST00000389212 F8WDY8 70 aa8.63□□□□□ -1.03
RAPGEF3-201ENST00000389212 K7EQG2 157 aa8.63□□□□□ -1.03
RAPGEF3-201ENST00000389212 A0A1B0GX51 115 aa8.63□□□□□ -1.03
RAPGEF3-201ENST00000389212 NXPH4O95158 308 aa8.63□□□□□ -1.03
RAPGEF3-201ENST00000389212 COX6CP09669 75 aa8.63□□□□□ -1.03
RAPGEF3-201ENST00000389212 KHDC1LQ5JSQ8 128 aa8.63□□□□□ -1.03
RAPGEF3-201ENST00000389212 NF1P21359 2839 aa8.63□□□□□ -1.03
RAPGEF3-201ENST00000389212 CLEC2BQ92478 149 aa8.62□□□□□ -1.03
RAPGEF3-201ENST00000389212 DPH3Q96FX2 82 aa8.62□□□□□ -1.03
RAPGEF3-201ENST00000389212 COX7CP15954 63 aa8.62□□□□□ -1.03
RAPGEF3-201ENST00000389212 POLR2KP53803 58 aaKnown RBP8.62□□□□□ -1.03
RAPGEF3-201ENST00000389212 BRK1Q8WUW1 75 aa8.62□□□□□ -1.03
RAPGEF3-201ENST00000389212 CHD6Q8TD26 2715 aa8.62□□□□□ -1.03
RAPGEF3-201ENST00000389212 LGALS3P17931 250 aaKnown RBP8.62□□□□□ -1.03
RAPGEF3-201ENST00000389212 RHOHQ15669 191 aa8.62□□□□□ -1.03
RAPGEF3-201ENST00000389212 ZNF702PQ9H963 129 aa8.62□□□□□ -1.03
RAPGEF3-201ENST00000389212 RBMY1A1P0DJD3 496 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms