RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 RRN3P1Q2M238 152 aa7.25□□□□□ -1.25
LTN1-203ENST00000389195 A8MWV9 139 aa7.25□□□□□ -1.25
LTN1-203ENST00000389195 I3L3M4 83 aa7.25□□□□□ -1.25
LTN1-203ENST00000389195 COX8AP10176 69 aa7.25□□□□□ -1.25
LTN1-203ENST00000389195 TMEM263Q8WUH6 116 aaKnown RBP7.25□□□□□ -1.25
LTN1-203ENST00000389195 C11orf86A6NJI1 115 aa7.24□□□□□ -1.25
LTN1-203ENST00000389195 FOSL1P15407 271 aa7.24□□□□□ -1.25
LTN1-203ENST00000389195 LINC00467Q9BRT7 94 aa7.24□□□□□ -1.25
LTN1-203ENST00000389195 A8MZ25 164 aa7.24□□□□□ -1.25
LTN1-203ENST00000389195 LINC00694P0DN24 101 aa7.24□□□□□ -1.25
LTN1-203ENST00000389195 FAM104AQ969W3 186 aa7.24□□□□□ -1.25
LTN1-203ENST00000389195 ZMAT4Q9H898 229 aa7.24□□□□□ -1.25
LTN1-203ENST00000389195 A0A0J9YXV3 536 aa7.23□□□□□ -1.25
LTN1-203ENST00000389195 TMEM170BQ5T4T1 132 aa7.23□□□□□ -1.25
LTN1-203ENST00000389195 C2orf88Q9BSF0 95 aa7.23□□□□□ -1.25
LTN1-203ENST00000389195 CST9LQ9H4G1 147 aa7.23□□□□□ -1.25
LTN1-203ENST00000389195 IGLV4-69A0A075B6H9 119 aa7.22□□□□□ -1.25
LTN1-203ENST00000389195 F8VRH5 84 aa7.22□□□□□ -1.25
LTN1-203ENST00000389195 H7C1H1 209 aa7.22□□□□□ -1.25
LTN1-203ENST00000389195 RS1O15537 224 aa7.22□□□□□ -1.25
LTN1-203ENST00000389195 C20orf203Q8NBC4 194 aa7.22□□□□□ -1.25
LTN1-203ENST00000389195 RETNQ9HD89 108 aa7.22□□□□□ -1.25
LTN1-203ENST00000389195 TRBV6-5A0A0K0K1A5 114 aa7.22□□□□□ -1.25
LTN1-203ENST00000389195 KRTAP10-11P60412 298 aa7.22□□□□□ -1.25
LTN1-203ENST00000389195 FAM110AQ9BQ89 295 aa7.22□□□□□ -1.25
LTN1-203ENST00000389195 IGKV3OR2-268A0A0C4DH90 116 aa7.21□□□□□ -1.25
LTN1-203ENST00000389195 PPP1R17O96001 155 aa7.21□□□□□ -1.25
LTN1-203ENST00000389195 C9orf66Q5T8R8 295 aa7.21□□□□□ -1.25
LTN1-203ENST00000389195 NTM-AS1Q6ZSK4 140 aa7.21□□□□□ -1.25
LTN1-203ENST00000389195 C3orf56Q8N813 242 aa7.21□□□□□ -1.25
LTN1-203ENST00000389195 IL17DQ8TAD2 202 aa7.21□□□□□ -1.26
LTN1-203ENST00000389195 SPXQ9BT56 116 aa7.21□□□□□ -1.26
LTN1-203ENST00000389195 CHCHD7Q9BUK0 85 aa7.21□□□□□ -1.26
LTN1-203ENST00000389195 CSMD3Q7Z407 3707 aa7.21□□□□□ -1.26
LTN1-203ENST00000389195 IGLV4-3A0A075B6K6 122 aa7.21□□□□□ -1.26
LTN1-203ENST00000389195 TRGV4A0A0C4DH28 118 aa7.21□□□□□ -1.26
LTN1-203ENST00000389195 A0A0J9YY99 117 aa7.21□□□□□ -1.26
LTN1-203ENST00000389195 BVES-AS1Q5T3Y7 98 aa7.21□□□□□ -1.26
LTN1-203ENST00000389195 BOD1L2Q8IYS8 172 aa7.21□□□□□ -1.26
LTN1-203ENST00000389195 RAB37Q96AX2 223 aa7.21□□□□□ -1.26
LTN1-203ENST00000389195 X6R8D5 127 aa7.21□□□□□ -1.26
LTN1-203ENST00000389195 TSPEAR-AS2P59090 65 aa7.2□□□□□ -1.26
LTN1-203ENST00000389195 Q6ZUT4 128 aa7.2□□□□□ -1.26
LTN1-203ENST00000389195 MRPS16Q9Y3D3 137 aaKnown RBP7.2□□□□□ -1.26
LTN1-203ENST00000389195 COL7A1Q02388 2944 aa7.2□□□□□ -1.26
LTN1-203ENST00000389195 TRBV25-1A0A075B6N4 114 aa7.2□□□□□ -1.26
LTN1-203ENST00000389195 IGHV4-30-4P0DP06 118 aa7.2□□□□□ -1.26
LTN1-203ENST00000389195 HTN3P15516 51 aa7.2□□□□□ -1.26
LTN1-203ENST00000389195 PMVKQ15126 192 aa7.2□□□□□ -1.26
LTN1-203ENST00000389195 OR11H2Q8NH07 326 aa7.2□□□□□ -1.26
LTN1-203ENST00000389195 PLEKHB2Q96CS7 222 aa7.2□□□□□ -1.26
LTN1-203ENST00000389195 PRADC1Q9BSG0 188 aa7.2□□□□□ -1.26
LTN1-203ENST00000389195 TRBV7-3A0A075B6L6 115 aa7.19□□□□□ -1.26
LTN1-203ENST00000389195 TRAV8-3A0A0A6YYJ7 113 aa7.19□□□□□ -1.26
LTN1-203ENST00000389195 K7ERJ3 54 aa7.19□□□□□ -1.26
LTN1-203ENST00000389195 FAM222AQ5U5X8 452 aa7.19□□□□□ -1.26
LTN1-203ENST00000389195 CLUHP3Q96NS8 147 aa7.19□□□□□ -1.26
LTN1-203ENST00000389195 CELA1Q9UNI1 258 aa7.19□□□□□ -1.26
LTN1-203ENST00000389195 G3V4G9 280 aa7.19□□□□□ -1.26
LTN1-203ENST00000389195 C16orf74Q96GX8 76 aa7.19□□□□□ -1.26
LTN1-203ENST00000389195 LYSTQ99698 3801 aa7.19□□□□□ -1.26
LTN1-203ENST00000389195 VCX2Q9H322 139 aa7.19□□□□□ -1.26
LTN1-203ENST00000389195 K7EQD1 137 aa7.18□□□□□ -1.26
LTN1-203ENST00000389195 GCSHP23434 173 aa7.18□□□□□ -1.26
LTN1-203ENST00000389195 Q8N3U1 123 aa7.18□□□□□ -1.26
LTN1-203ENST00000389195 COTL1Q14019 142 aa7.18□□□□□ -1.26
LTN1-203ENST00000389195 CHAC1Q9BUX1 264 aa7.18□□□□□ -1.26
LTN1-203ENST00000389195 C1QTNF4Q9BXJ3 329 aa7.18□□□□□ -1.26
LTN1-203ENST00000389195 PLNP26678 52 aa7.17□□□□□ -1.26
LTN1-203ENST00000389195 FXYD2P54710 66 aa7.17□□□□□ -1.26
LTN1-203ENST00000389195 DAZ2Q13117 558 aaKnown RBP7.17□□□□□ -1.26
LTN1-203ENST00000389195 FHL2Q14192 279 aa7.17□□□□□ -1.26
LTN1-203ENST00000389195 COL5A1-AS1Q5SY13 56 aa7.17□□□□□ -1.26
LTN1-203ENST00000389195 TRAV13-1A0A0B4J241 112 aa7.17□□□□□ -1.26
LTN1-203ENST00000389195 TRAV12-1A0A0B4J245 112 aa7.17□□□□□ -1.26
LTN1-203ENST00000389195 NPSP0C0P6 89 aa7.17□□□□□ -1.26
LTN1-203ENST00000389195 TMEM97Q5BJF2 176 aa7.17□□□□□ -1.26
LTN1-203ENST00000389195 UBE2D4Q9Y2X8 147 aa7.17□□□□□ -1.26
LTN1-203ENST00000389195 TENM2Q9NT68 2774 aa7.17□□□□□ -1.26
LTN1-203ENST00000389195 TRAV4A0A0B4J268 109 aa7.16□□□□□ -1.26
LTN1-203ENST00000389195 IGHV4-28A0A0C4DH34 117 aa7.16□□□□□ -1.26
LTN1-203ENST00000389195 RHODO00212 210 aa7.16□□□□□ -1.26
LTN1-203ENST00000389195 COX6A2Q02221 97 aa7.16□□□□□ -1.26
LTN1-203ENST00000389195 RPL32P62910 135 aaKnown RBP7.16□□□□□ -1.26
LTN1-203ENST00000389195 GAGE6Q13070 117 aa7.16□□□□□ -1.26
LTN1-203ENST00000389195 CMC4P56277 68 aaPredicted RBP7.15□□□□□ -1.26
LTN1-203ENST00000389195 RPL36AP83881 106 aaKnown RBP7.15□□□□□ -1.26
LTN1-203ENST00000389195 SFTA2Q6UW10 78 aa7.15□□□□□ -1.26
LTN1-203ENST00000389195 CLPSL2Q6UWE3 100 aa7.15□□□□□ -1.26
LTN1-203ENST00000389195 RPL36ALQ969Q0 106 aaKnown RBP7.15□□□□□ -1.26
LTN1-203ENST00000389195 TIMM17AQ99595 171 aa7.15□□□□□ -1.26
LTN1-203ENST00000389195 ZNF815PA8K554 130 aa7.15□□□□□ -1.26
LTN1-203ENST00000389195 SPINK8P0C7L1 97 aa7.15□□□□□ -1.26
LTN1-203ENST00000389195 RHOHQ15669 191 aa7.15□□□□□ -1.26
LTN1-203ENST00000389195 DGAT2L7PQ6IED9 249 aa7.15□□□□□ -1.26
LTN1-203ENST00000389195 WFDC9Q8NEX5 89 aa7.15□□□□□ -1.26
LTN1-203ENST00000389195 TMEM141Q96I45 108 aa7.15□□□□□ -1.26
LTN1-203ENST00000389195 TAX1BP3O14907 124 aa7.14□□□□□ -1.27
LTN1-203ENST00000389195 INSL3P51460 131 aa7.14□□□□□ -1.27
LTN1-203ENST00000389195 GYPEP15421 78 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms