RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 FAM25EA8MYX2 175 aa-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 H0YGG7 62 aa-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 M0R135 149 aa-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 RBP4P02753 201 aa-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 COX8AP10176 69 aa-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 GNG3P63215 75 aa-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 TMEM170BQ5T4T1 132 aa-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 RPL7L1Q6DKI1 246 aaKnown RBP-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 PTRHD1Q6GMV3 140 aaKnown RBP-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 DHRS4L2Q6PKH6 230 aa-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 C9orf62Q8N4C0 152 aa-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 RPRMQ9NS64 109 aa-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 NDUFA12Q9UI09 145 aa-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 STOML2Q9UJZ1 356 aa-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 SBF2Q86WG5 1849 aa-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 TEX15Q9BXT5 2789 aa-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 POLA1P09884 1462 aaPredicted RBP-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 MRC1P22897 1456 aa-0.92□□□□□ -2.56
SNORD28-201ENST00000384706 KIAA0556O60303 1618 aa-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 SLIT1O75093 1534 aa-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 HMGXB3Q12766 1538 aa-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 H3BNG1 76 aa-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 PPP1R17O96001 155 aa-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 IFNA17P01571 189 aa-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 PIRTP0C851 137 aa-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 HSD11B1P28845 292 aa-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 DEFA5Q01523 94 aa-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 COX17Q14061 63 aa-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 CLLU1Q5K131 121 aa-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 LINC01545Q5VT33 79 aa-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 ATP11AUNQ6ZP68 121 aa-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 VSTM2AQ8TAG5 236 aa-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 CCDC32Q9BV29 185 aa-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 NAA60Q9H7X0 242 aa-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 DNAJC15Q9Y5T4 150 aa-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 R4GMQ9 66 aa-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 TROQ12816 1431 aaPredicted RBP-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 CCDC168Q8NDH2 2452 aa-0.93□□□□□ -2.56
SNORD28-201ENST00000384706 COL4A6Q14031 1691 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 FAT3Q8TDW7 4589 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 ARHGEF12Q9NZN5 1544 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 VPS13BQ7Z7G8 4022 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 ZZEF1O43149 2961 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 FMN2Q9NZ56 1722 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 ADAMTS12P58397 1594 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 YTHDC2Q9H6S0 1430 aaKnown RBP-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 A6NIN4 97 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 CPSF4LA6NMK7 179 aaKnown RBP-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 E7EQ34 232 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 YPEL1O60688 119 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 FAM107AO95990 144 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 RPL7P18124 248 aaKnown RBP-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 POLR2HP52434 150 aaKnown RBP-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 TCTAP57738 103 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 H1FX-AS1Q4G0G2 97 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 DCUN1D2Q6PH85 259 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 STX12Q86Y82 276 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 SPTSSBQ8NFR3 76 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 BANF2Q9H503 90 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 CALML5Q9NZT1 146 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 LINC00312Q9Y6C7 94 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 ERCC6Q03468 1493 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 FAM186AA6NE01 2351 aa-0.94□□□□□ -2.56
SNORD28-201ENST00000384706 LYSTQ99698 3801 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 PAPPA2Q9BXP8 1791 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 MTORP42345 2549 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 PTPN23Q9H3S7 1636 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 TRBV7-4A0A0J9YYF1 115 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 SMIM24O75264 130 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 NIPSNAP2O75323 286 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 CTXN2P0C2S0 81 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 PIPP12273 146 aaPredicted RBP-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 SERPINB1P30740 379 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 UBE2G1P62253 170 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 REEP5Q00765 189 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 RGS21Q2M5E4 152 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 SPANXN1Q5VSR9 72 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 ZNF818PQ6ZRF7 136 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 TMED4Q7Z7H5 227 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 THEM6Q8WUY1 208 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 CCDC115Q96NT0 180 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 V9GYH0 126 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 KIF21AQ7Z4S6 1674 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 DMXL1Q9Y485 3027 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 TULP4Q9NRJ4 1543 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 ANKRD11Q6UB99 2663 aaPredicted RBP-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 NWD2Q9ULI1 1742 aa-0.95□□□□□ -2.56
SNORD28-201ENST00000384706 PKD1P98161 4303 aa-0.96□□□□□ -2.56
SNORD28-201ENST00000384706 MYOM3Q5VTT5 1437 aa-0.96□□□□□ -2.56
SNORD28-201ENST00000384706 LRRK2Q5S007 2527 aa-0.96□□□□□ -2.56
SNORD28-201ENST00000384706 PXDNQ92626 1479 aa-0.96□□□□□ -2.56
SNORD28-201ENST00000384706 ARPC5O15511 151 aa-0.96□□□□□ -2.56
SNORD28-201ENST00000384706 PFDN1O60925 122 aa-0.96□□□□□ -2.56
SNORD28-201ENST00000384706 PAEPP09466 180 aa-0.96□□□□□ -2.56
SNORD28-201ENST00000384706 HLA-DRB4P13762 266 aa-0.96□□□□□ -2.56
SNORD28-201ENST00000384706 USMG5Q96IX5 58 aa-0.96□□□□□ -2.56
SNORD28-201ENST00000384706 PARVGQ9HBI0 331 aa-0.96□□□□□ -2.56
SNORD28-201ENST00000384706 LSM2Q9Y333 95 aaKnown RBP-0.96□□□□□ -2.56
SNORD28-201ENST00000384706 HLA-DRB4X5D2U9 266 aa-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms