RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 HMCN2Q8NDA2 5059 aa9.08□□□□□ -0.96
SHOX-202ENST00000381575 IGKV3OR2-268A0A0C4DH90 116 aa9.08□□□□□ -0.96
SHOX-202ENST00000381575 AMTP48728 403 aa9.08□□□□□ -0.96
SHOX-202ENST00000381575 SLC51BQ86UW2 128 aa9.08□□□□□ -0.96
SHOX-202ENST00000381575 TCTE3Q8IZS6 198 aa9.08□□□□□ -0.96
SHOX-202ENST00000381575 RPP21Q9H633 154 aaKnown RBP9.08□□□□□ -0.96
SHOX-202ENST00000381575 UBE2L6O14933 153 aa9.07□□□□□ -0.96
SHOX-202ENST00000381575 FOXA3P55318 350 aaPredicted RBP9.07□□□□□ -0.96
SHOX-202ENST00000381575 COTL1Q14019 142 aa9.07□□□□□ -0.96
SHOX-202ENST00000381575 SDIM1Q6ZPB5 146 aa9.07□□□□□ -0.96
SHOX-202ENST00000381575 C9orf62Q8N4C0 152 aa9.07□□□□□ -0.96
SHOX-202ENST00000381575 GATD1Q8NB37 220 aa9.07□□□□□ -0.96
SHOX-202ENST00000381575 OCC1Q8TAD7 63 aa9.07□□□□□ -0.96
SHOX-202ENST00000381575 RPL39LQ96EH5 51 aaKnown RBP9.07□□□□□ -0.96
SHOX-202ENST00000381575 PGLYRP4Q96LB8 373 aa9.07□□□□□ -0.96
SHOX-202ENST00000381575 BIN3Q9NQY0 253 aa9.07□□□□□ -0.96
SHOX-202ENST00000381575 A0A1B0GUV1 79 aa9.06□□□□□ -0.96
SHOX-202ENST00000381575 SLPIP03973 132 aa9.06□□□□□ -0.96
SHOX-202ENST00000381575 CHTF8P0CG12 524 aa9.06□□□□□ -0.96
SHOX-202ENST00000381575 TRAV8-4A0A0B4J246 113 aa9.05□□□□□ -0.96
SHOX-202ENST00000381575 Q6ZNX1 250 aa9.05□□□□□ -0.96
SHOX-202ENST00000381575 CLRN3Q8NCR9 226 aa9.05□□□□□ -0.96
SHOX-202ENST00000381575 GTSF1Q8WW33 167 aa9.05□□□□□ -0.96
SHOX-202ENST00000381575 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.04□□□□□ -0.96
SHOX-202ENST00000381575 IGKV2-29A2NJV5 120 aaPredicted RBP9.04□□□□□ -0.96
SHOX-202ENST00000381575 GAGE12HA6NDE8 117 aa9.04□□□□□ -0.96
SHOX-202ENST00000381575 CNBPP62633 177 aaKnown RBP9.04□□□□□ -0.96
SHOX-202ENST00000381575 CNFNQ9BYD5 112 aa9.04□□□□□ -0.96
SHOX-202ENST00000381575 OXTP01178 125 aa9.03□□□□□ -0.96
SHOX-202ENST00000381575 CEBPGP53567 150 aa9.03□□□□□ -0.96
SHOX-202ENST00000381575 WDR73Q6P4I2 378 aa9.03□□□□□ -0.96
SHOX-202ENST00000381575 ALKAL2Q6UX46 152 aa9.03□□□□□ -0.96
SHOX-202ENST00000381575 C15orf56Q8N910 161 aa9.03□□□□□ -0.96
SHOX-202ENST00000381575 hCG_2014768A0A024R1R8 64 aa9.02□□□□□ -0.97
SHOX-202ENST00000381575 HIGD2BQ4VC39 106 aa9.02□□□□□ -0.97
SHOX-202ENST00000381575 AP5S1Q9NUS5 200 aa9.02□□□□□ -0.97
SHOX-202ENST00000381575 IGHV3-64A0A075B6Q5 118 aa9.01□□□□□ -0.97
SHOX-202ENST00000381575 GATCO43716 136 aaKnown RBP9.01□□□□□ -0.97
SHOX-202ENST00000381575 AMMECR1LQ6DCA0 310 aa9.01□□□□□ -0.97
SHOX-202ENST00000381575 RNASEKQ6P5S7 137 aaKnown RBP9.01□□□□□ -0.97
SHOX-202ENST00000381575 DPH3Q96FX2 82 aa9.01□□□□□ -0.97
SHOX-202ENST00000381575 GAS8-AS1O95177 125 aa9□□□□□ -0.97
SHOX-202ENST00000381575 APCSP02743 223 aa9□□□□□ -0.97
SHOX-202ENST00000381575 TAGLN2P37802 199 aaKnown RBP9□□□□□ -0.97
SHOX-202ENST00000381575 CIRBPQ14011 172 aaKnown RBP9□□□□□ -0.97
SHOX-202ENST00000381575 A0A087WYN8 130 aa8.99□□□□□ -0.97
SHOX-202ENST00000381575 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.99□□□□□ -0.97
SHOX-202ENST00000381575 SDHAF1A6NFY7 115 aa8.99□□□□□ -0.97
SHOX-202ENST00000381575 SMIM15Q7Z3B0 74 aa8.99□□□□□ -0.97
SHOX-202ENST00000381575 CHCHD10Q8WYQ3 142 aaPredicted RBP8.99□□□□□ -0.97
SHOX-202ENST00000381575 UBR4Q5T4S7 5183 aa8.99□□□□□ -0.97
SHOX-202ENST00000381575 FGF6P10767 208 aa8.99□□□□□ -0.97
SHOX-202ENST00000381575 SPACA4Q8TDM5 124 aa8.99□□□□□ -0.97
SHOX-202ENST00000381575 TMEM250H0YL14 139 aa8.98□□□□□ -0.97
SHOX-202ENST00000381575 COX6A2Q02221 97 aa8.98□□□□□ -0.97
SHOX-202ENST00000381575 SERTAD4-AS1Q5TG53 156 aa8.98□□□□□ -0.97
SHOX-202ENST00000381575 AKAP14Q86UN6 197 aa8.98□□□□□ -0.97
SHOX-202ENST00000381575 IGKV2-24A0A0C4DH68 120 aa8.97□□□□□ -0.97
SHOX-202ENST00000381575 FAM231BA6NCW3 169 aa8.97□□□□□ -0.97
SHOX-202ENST00000381575 A8MWL6 223 aa8.97□□□□□ -0.97
SHOX-202ENST00000381575 NCR2O95944 276 aa8.97□□□□□ -0.97
SHOX-202ENST00000381575 PMCHP20382 165 aa8.97□□□□□ -0.97
SHOX-202ENST00000381575 BLOC1S1P78537 153 aa8.97□□□□□ -0.97
SHOX-202ENST00000381575 PRSS3P2Q8NHM4 247 aa8.97□□□□□ -0.97
SHOX-202ENST00000381575 LINC00526Q96FQ7 95 aa8.97□□□□□ -0.97
SHOX-202ENST00000381575 TMEM242Q9NWH2 141 aa8.97□□□□□ -0.97
SHOX-202ENST00000381575 XCL1P47992 114 aa8.96□□□□□ -0.98
SHOX-202ENST00000381575 FAM231DQ6ZW35 169 aa8.96□□□□□ -0.98
SHOX-202ENST00000381575 I3L3M4 83 aa8.95□□□□□ -0.98
SHOX-202ENST00000381575 PHOX2AO14813 284 aa8.95□□□□□ -0.98
SHOX-202ENST00000381575 TSHBP01222 138 aa8.95□□□□□ -0.98
SHOX-202ENST00000381575 MT1HL1P0DM35 61 aa8.95□□□□□ -0.98
SHOX-202ENST00000381575 RPS10P46783 165 aaKnown RBP8.95□□□□□ -0.98
SHOX-202ENST00000381575 FOXI1Q12951 378 aa8.95□□□□□ -0.98
SHOX-202ENST00000381575 CFAP161Q6P656 301 aa8.95□□□□□ -0.98
SHOX-202ENST00000381575 SMIM7Q9BQ49 75 aa8.95□□□□□ -0.98
SHOX-202ENST00000381575 PLA2G2DQ9UNK4 145 aa8.95□□□□□ -0.98
SHOX-202ENST00000381575 TNXBP22105 4242 aa8.95□□□□□ -0.98
SHOX-202ENST00000381575 HIGD1CA8MV81 97 aa8.94□□□□□ -0.98
SHOX-202ENST00000381575 SMKR1H3BMG3 65 aa8.94□□□□□ -0.98
SHOX-202ENST00000381575 MAJINQ3KP22 176 aa8.94□□□□□ -0.98
SHOX-202ENST00000381575 TEX261Q6UWH6 196 aa8.94□□□□□ -0.98
SHOX-202ENST00000381575 LYPD6BQ8NI32 183 aa8.94□□□□□ -0.98
SHOX-202ENST00000381575 RNF185Q96GF1 192 aa8.94□□□□□ -0.98
SHOX-202ENST00000381575 EIF5A2Q9GZV4 153 aaKnown RBP8.94□□□□□ -0.98
SHOX-202ENST00000381575 PLAC8Q9NZF1 115 aa8.94□□□□□ -0.98
SHOX-202ENST00000381575 GVQW2A0A096LPI5 108 aaPredicted RBP8.93□□□□□ -0.98
SHOX-202ENST00000381575 TRBV6-5A0A0K0K1A5 114 aa8.93□□□□□ -0.98
SHOX-202ENST00000381575 H7C423 109 aa8.93□□□□□ -0.98
SHOX-202ENST00000381575 CCL25O15444 150 aa8.93□□□□□ -0.98
SHOX-202ENST00000381575 CT83Q5H943 113 aa8.93□□□□□ -0.98
SHOX-202ENST00000381575 LINC01551Q86U37 167 aa8.93□□□□□ -0.98
SHOX-202ENST00000381575 OR5A1Q8NGJ0 315 aa8.93□□□□□ -0.98
SHOX-202ENST00000381575 BORCS7Q96B45 105 aa8.93□□□□□ -0.98
SHOX-202ENST00000381575 ST20Q9HBF5 79 aa8.93□□□□□ -0.98
SHOX-202ENST00000381575 A0A096LNI7 61 aa8.92□□□□□ -0.98
SHOX-202ENST00000381575 LINC00959A0A1B0GUT2 108 aa8.92□□□□□ -0.98
SHOX-202ENST00000381575 A0A1B0GUT8 65 aa8.92□□□□□ -0.98
SHOX-202ENST00000381575 NDUFS6O75380 124 aaKnown RBP8.92□□□□□ -0.98
SHOX-202ENST00000381575 ESDP10768 282 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms